RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CFAP44Q96MT7 982 aa15.44■□□□□ 0.06
CHMP2B-201ENST00000263780 K7ELQ4 463 aaPredicted RBP15.43■□□□□ 0.06
CHMP2B-201ENST00000263780 EXOSC9Q06265 439 aaKnown RBP15.43■□□□□ 0.06
CHMP2B-201ENST00000263780 HS1BP3Q53T59 392 aa15.43■□□□□ 0.06
CHMP2B-201ENST00000263780 MSNP26038 577 aaKnown RBP15.43■□□□□ 0.06
CHMP2B-201ENST00000263780 CHD1LQ86WJ1 897 aa15.43■□□□□ 0.06
CHMP2B-201ENST00000263780 NRXN1Q9ULB1 1477 aa15.43■□□□□ 0.06
CHMP2B-201ENST00000263780 SETBP1Q9Y6X0 1596 aa15.42■□□□□ 0.06
CHMP2B-201ENST00000263780 SSH1Q8WYL5 1049 aa15.42■□□□□ 0.06
CHMP2B-201ENST00000263780 SLC12A5Q9H2X9 1139 aa15.42■□□□□ 0.06
CHMP2B-201ENST00000263780 OFD1O75665 1012 aa15.42■□□□□ 0.06
CHMP2B-201ENST00000263780 KLHL40Q2TBA0 621 aa15.42■□□□□ 0.06
CHMP2B-201ENST00000263780 NOB1Q9ULX3 412 aaKnown RBP15.42■□□□□ 0.06
CHMP2B-201ENST00000263780 ADGRB2O60241 1585 aa15.42■□□□□ 0.06
CHMP2B-201ENST00000263780 MAP7D2Q96T17 732 aa15.41■□□□□ 0.06
CHMP2B-201ENST00000263780 VWDEQ8N2E2 1590 aa15.41■□□□□ 0.06
CHMP2B-201ENST00000263780 KIAA1211Q6ZU35 1233 aa15.41■□□□□ 0.06
CHMP2B-201ENST00000263780 GCC1Q96CN9 775 aa15.41■□□□□ 0.06
CHMP2B-201ENST00000263780 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
CHMP2B-201ENST00000263780 TMEM57Q8N5G2 664 aa15.4■□□□□ 0.06
CHMP2B-201ENST00000263780 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
CHMP2B-201ENST00000263780 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
CHMP2B-201ENST00000263780 LNPKQ9C0E8 428 aa15.39■□□□□ 0.05
CHMP2B-201ENST00000263780 DDX49Q9Y6V7 483 aaKnown RBP15.39■□□□□ 0.05
CHMP2B-201ENST00000263780 ZFYVE16Q7Z3T8 1539 aa15.39■□□□□ 0.05
CHMP2B-201ENST00000263780 TMPOP42166 694 aaKnown RBP15.38■□□□□ 0.05
CHMP2B-201ENST00000263780 NOS1P29475 1434 aa15.38■□□□□ 0.05
CHMP2B-201ENST00000263780 ZNF445P59923 1031 aa15.37■□□□□ 0.05
CHMP2B-201ENST00000263780 NUCB2P80303 420 aa15.37■□□□□ 0.05
CHMP2B-201ENST00000263780 ARHGAP31Q2M1Z3 1444 aa15.37■□□□□ 0.05
CHMP2B-201ENST00000263780 KIF1BO60333 1816 aa15.37■□□□□ 0.05
CHMP2B-201ENST00000263780 ARAP3Q8WWN8 1544 aa15.37■□□□□ 0.05
CHMP2B-201ENST00000263780 KIF2CQ99661 725 aa15.37■□□□□ 0.05
CHMP2B-201ENST00000263780 ANKRD36BQ8N2N9 1353 aa15.36■□□□□ 0.05
CHMP2B-201ENST00000263780 KIF3BO15066 747 aa15.36■□□□□ 0.05
CHMP2B-201ENST00000263780 BRPF1P55201 1214 aaPredicted RBP15.36■□□□□ 0.05
CHMP2B-201ENST00000263780 C14orf93Q9H972 538 aaKnown RBP15.36■□□□□ 0.05
CHMP2B-201ENST00000263780 TRAK1Q9UPV9 953 aa15.36■□□□□ 0.05
CHMP2B-201ENST00000263780 EVC2Q86UK5 1308 aa15.36■□□□□ 0.05
CHMP2B-201ENST00000263780 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
CHMP2B-201ENST00000263780 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
CHMP2B-201ENST00000263780 AFAP1Q8N556 730 aa15.35■□□□□ 0.05
CHMP2B-201ENST00000263780 PLEKHF1Q96S99 279 aa15.35■□□□□ 0.05
CHMP2B-201ENST00000263780 TRIM35Q9UPQ4 493 aa15.35■□□□□ 0.05
CHMP2B-201ENST00000263780 REREQ9P2R6 1566 aa15.35■□□□□ 0.05
CHMP2B-201ENST00000263780 IFT172Q9UG01 1749 aa15.35■□□□□ 0.05
CHMP2B-201ENST00000263780 ANKRD45Q5TZF3 282 aa15.34■□□□□ 0.05
CHMP2B-201ENST00000263780 FANCAO15360 1455 aa15.34■□□□□ 0.05
CHMP2B-201ENST00000263780 SSFA2P28290 1259 aa15.34■□□□□ 0.05
CHMP2B-201ENST00000263780 RABEP1Q15276 862 aa15.34■□□□□ 0.05
CHMP2B-201ENST00000263780 MTERF4Q7Z6M4 381 aaKnown RBP15.34■□□□□ 0.05
CHMP2B-201ENST00000263780 CFAP74Q9C0B2 1584 aa15.34■□□□□ 0.05
CHMP2B-201ENST00000263780 CDC45O75419 566 aa15.33■□□□□ 0.05
CHMP2B-201ENST00000263780 CSPP1Q1MSJ5 1256 aa15.33■□□□□ 0.05
CHMP2B-201ENST00000263780 TBC1D9Q6ZT07 1266 aa15.33■□□□□ 0.05
CHMP2B-201ENST00000263780 U2SURPO15042 1029 aaKnown RBP15.33■□□□□ 0.04
CHMP2B-201ENST00000263780 MCM5P33992 734 aa15.33■□□□□ 0.04
CHMP2B-201ENST00000263780 CWC22Q9HCG8 908 aaKnown RBP15.33■□□□□ 0.04
CHMP2B-201ENST00000263780 ZNF500O60304 480 aaPredicted RBP15.32■□□□□ 0.04
CHMP2B-201ENST00000263780 ARHGAP45Q92619 1136 aa15.32■□□□□ 0.04
CHMP2B-201ENST00000263780 RPGRIP1LQ68CZ1 1315 aa15.32■□□□□ 0.04
CHMP2B-201ENST00000263780 NOL7Q9UMY1 257 aaKnown RBP15.32■□□□□ 0.04
CHMP2B-201ENST00000263780 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
CHMP2B-201ENST00000263780 INO80Q9ULG1 1556 aaPredicted RBP15.32■□□□□ 0.04
CHMP2B-201ENST00000263780 GAS2L2Q8NHY3 880 aa15.31■□□□□ 0.04
CHMP2B-201ENST00000263780 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
CHMP2B-201ENST00000263780 ZC3H13Q5T200 1668 aaKnown RBP15.31■□□□□ 0.04
CHMP2B-201ENST00000263780 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
CHMP2B-201ENST00000263780 RIPK4P57078 832 aa15.31■□□□□ 0.04
CHMP2B-201ENST00000263780 ATP7AQ04656 1500 aa15.31■□□□□ 0.04
CHMP2B-201ENST00000263780 CD2BP2O95400 341 aaKnown RBP15.3■□□□□ 0.04
CHMP2B-201ENST00000263780 MED14O60244 1454 aa15.3■□□□□ 0.04
CHMP2B-201ENST00000263780 EFCAB6Q5THR3 1501 aa15.3■□□□□ 0.04
CHMP2B-201ENST00000263780 ZBTB7BO15156 539 aaPredicted RBP15.29■□□□□ 0.04
CHMP2B-201ENST00000263780 ADGRB3O60242 1522 aa15.29■□□□□ 0.04
CHMP2B-201ENST00000263780 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
CHMP2B-201ENST00000263780 ZSCAN23Q3MJ62 389 aa15.29■□□□□ 0.04
CHMP2B-201ENST00000263780 MCTP1Q6DN14 999 aa15.29■□□□□ 0.04
CHMP2B-201ENST00000263780 PDLIM2Q96JY6 352 aa15.29■□□□□ 0.04
CHMP2B-201ENST00000263780 UHRF1BP1LA0JNW5 1464 aa15.28■□□□□ 0.04
CHMP2B-201ENST00000263780 PPIP5K1Q6PFW1 1433 aa15.28■□□□□ 0.04
CHMP2B-201ENST00000263780 PIK3R4Q99570 1358 aa15.28■□□□□ 0.04
CHMP2B-201ENST00000263780 CHGAP10645 457 aaKnown RBP15.28■□□□□ 0.04
CHMP2B-201ENST00000263780 NCLP19338 710 aaKnown RBP15.28■□□□□ 0.04
CHMP2B-201ENST00000263780 ADGRB1O14514 1584 aa15.27■□□□□ 0.04
CHMP2B-201ENST00000263780 LMTK2Q8IWU2 1503 aa15.27■□□□□ 0.04
CHMP2B-201ENST00000263780 CAVIN1Q6NZI2 390 aaKnown RBP15.27■□□□□ 0.03
CHMP2B-201ENST00000263780 LMBRD1Q9NUN5 540 aa15.27■□□□□ 0.03
CHMP2B-201ENST00000263780 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.03
CHMP2B-201ENST00000263780 CYP2E1P05181 493 aaPredicted RBP15.26■□□□□ 0.03
CHMP2B-201ENST00000263780 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
CHMP2B-201ENST00000263780 CCDC39Q9UFE4 941 aa15.26■□□□□ 0.03
CHMP2B-201ENST00000263780 ZCCHC11Q5TAX3 1644 aaKnown RBP15.26■□□□□ 0.03
CHMP2B-201ENST00000263780 DYNC1I1O14576 645 aa15.26■□□□□ 0.03
CHMP2B-201ENST00000263780 DIAPH1O60610 1272 aaKnown RBP15.26■□□□□ 0.03
CHMP2B-201ENST00000263780 ST18O60284 1047 aa15.25■□□□□ 0.03
CHMP2B-201ENST00000263780 FCHSD2O94868 740 aa15.25■□□□□ 0.03
CHMP2B-201ENST00000263780 CASC1Q6TDU7 716 aa15.25■□□□□ 0.03
CHMP2B-201ENST00000263780 ZKSCAN5Q9Y2L8 839 aa15.25■□□□□ 0.03
CHMP2B-201ENST00000263780 MROH2AA6NES4 1674 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms