RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MST1RQ04912 1400 aa13.31□□□□□ -0.28
SNRNP40-201ENST00000263694 C1orf167Q5SNV9 1468 aa13.3□□□□□ -0.28
SNRNP40-201ENST00000263694 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
SNRNP40-201ENST00000263694 DCCP43146 1447 aa13.29□□□□□ -0.28
SNRNP40-201ENST00000263694 DDX17Q92841 729 aaKnown RBP13.28□□□□□ -0.28
SNRNP40-201ENST00000263694 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
SNRNP40-201ENST00000263694 MON2Q7Z3U7 1717 aa13.28□□□□□ -0.28
SNRNP40-201ENST00000263694 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
SNRNP40-201ENST00000263694 FOXO3O43524 673 aa13.28□□□□□ -0.28
SNRNP40-201ENST00000263694 XPCQ01831 940 aaPredicted RBP13.28□□□□□ -0.28
SNRNP40-201ENST00000263694 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
SNRNP40-201ENST00000263694 GGNBP2Q9H3C7 697 aa13.28□□□□□ -0.28
SNRNP40-201ENST00000263694 FYB1O15117 783 aa13.27□□□□□ -0.29
SNRNP40-201ENST00000263694 NME9Q86XW9 330 aa13.27□□□□□ -0.29
SNRNP40-201ENST00000263694 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
SNRNP40-201ENST00000263694 CGNL1Q0VF96 1302 aa13.27□□□□□ -0.29
SNRNP40-201ENST00000263694 USP6P35125 1406 aa13.26□□□□□ -0.29
SNRNP40-201ENST00000263694 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
SNRNP40-201ENST00000263694 CCDC184Q52MB2 194 aa13.26□□□□□ -0.29
SNRNP40-201ENST00000263694 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
SNRNP40-201ENST00000263694 EDC4Q6P2E9 1401 aaKnown RBP13.25□□□□□ -0.29
SNRNP40-201ENST00000263694 PSME1Q06323 249 aa13.25□□□□□ -0.29
SNRNP40-201ENST00000263694 PARD3Q8TEW0 1356 aa13.25□□□□□ -0.29
SNRNP40-201ENST00000263694 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
SNRNP40-201ENST00000263694 NRKQ7Z2Y5 1582 aa13.24□□□□□ -0.29
SNRNP40-201ENST00000263694 PAK3O75914 559 aaPredicted RBP13.24□□□□□ -0.29
SNRNP40-201ENST00000263694 RALBP1Q15311 655 aa13.24□□□□□ -0.29
SNRNP40-201ENST00000263694 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
SNRNP40-201ENST00000263694 MORC1Q86VD1 984 aa13.24□□□□□ -0.29
SNRNP40-201ENST00000263694 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
SNRNP40-201ENST00000263694 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
SNRNP40-201ENST00000263694 FBLN1P23142 703 aa13.23□□□□□ -0.29
SNRNP40-201ENST00000263694 NUTM2GQ5VZR2 741 aa13.23□□□□□ -0.29
SNRNP40-201ENST00000263694 KRT28Q7Z3Y7 464 aa13.22□□□□□ -0.29
SNRNP40-201ENST00000263694 PPP2R1AP30153 589 aa13.21□□□□□ -0.29
SNRNP40-201ENST00000263694 KIF1AQ12756 1690 aa13.21□□□□□ -0.29
SNRNP40-201ENST00000263694 MYBBP1AQ9BQG0 1328 aaKnown RBP13.2□□□□□ -0.3
SNRNP40-201ENST00000263694 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
SNRNP40-201ENST00000263694 ANKRD26Q9UPS8 1709 aa13.2□□□□□ -0.3
SNRNP40-201ENST00000263694 PIK3C2AO00443 1686 aa13.19□□□□□ -0.3
SNRNP40-201ENST00000263694 NSD2O96028 1365 aa13.19□□□□□ -0.3
SNRNP40-201ENST00000263694 TTC21AQ8NDW8 1320 aa13.19□□□□□ -0.3
SNRNP40-201ENST00000263694 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
SNRNP40-201ENST00000263694 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
SNRNP40-201ENST00000263694 ABTB2Q8N961 1025 aa13.19□□□□□ -0.3
SNRNP40-201ENST00000263694 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
SNRNP40-201ENST00000263694 TRPM3Q9HCF6 1732 aaPredicted RBP13.18□□□□□ -0.3
SNRNP40-201ENST00000263694 SOX12O15370 315 aa13.18□□□□□ -0.3
SNRNP40-201ENST00000263694 NLRP6P59044 892 aa13.18□□□□□ -0.3
SNRNP40-201ENST00000263694 PIP4K2BP78356 416 aa13.18□□□□□ -0.3
SNRNP40-201ENST00000263694 COG3Q96JB2 828 aa13.18□□□□□ -0.3
SNRNP40-201ENST00000263694 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
SNRNP40-201ENST00000263694 CERKQ8TCT0 537 aa13.17□□□□□ -0.3
SNRNP40-201ENST00000263694 NPHP3Q7Z494 1330 aa13.16□□□□□ -0.3
SNRNP40-201ENST00000263694 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
SNRNP40-201ENST00000263694 PXDNQ92626 1479 aa13.16□□□□□ -0.3
SNRNP40-201ENST00000263694 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
SNRNP40-201ENST00000263694 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
SNRNP40-201ENST00000263694 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
SNRNP40-201ENST00000263694 NLRP13Q86W25 1043 aa13.15□□□□□ -0.3
SNRNP40-201ENST00000263694 OVOS2A0A0J9YW53 1432 aa13.15□□□□□ -0.3
SNRNP40-201ENST00000263694 OVOS2Q6IE36 1432 aa13.15□□□□□ -0.3
SNRNP40-201ENST00000263694 MTHFSP49914 203 aa13.15□□□□□ -0.3
SNRNP40-201ENST00000263694 TOM1O60784 492 aa13.14□□□□□ -0.31
SNRNP40-201ENST00000263694 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
SNRNP40-201ENST00000263694 BRD4O60885 1362 aaPredicted RBP13.14□□□□□ -0.31
SNRNP40-201ENST00000263694 USP31Q70CQ4 1352 aa13.14□□□□□ -0.31
SNRNP40-201ENST00000263694 ALS2Q96Q42 1657 aa13.13□□□□□ -0.31
SNRNP40-201ENST00000263694 PPM1GO15355 546 aaPredicted RBP13.13□□□□□ -0.31
SNRNP40-201ENST00000263694 EMILIN1Q9Y6C2 1016 aa13.13□□□□□ -0.31
SNRNP40-201ENST00000263694 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
SNRNP40-201ENST00000263694 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
SNRNP40-201ENST00000263694 FAM9BQ8IZU0 186 aa13.12□□□□□ -0.31
SNRNP40-201ENST00000263694 POLKQ9UBT6 870 aa13.12□□□□□ -0.31
SNRNP40-201ENST00000263694 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
SNRNP40-201ENST00000263694 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
SNRNP40-201ENST00000263694 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
SNRNP40-201ENST00000263694 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
SNRNP40-201ENST00000263694 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
SNRNP40-201ENST00000263694 TNS3Q68CZ2 1445 aa13.1□□□□□ -0.31
SNRNP40-201ENST00000263694 USP54Q70EL1 1684 aa13.1□□□□□ -0.31
SNRNP40-201ENST00000263694 PNISRQ8TF01 805 aaKnown RBP13.1□□□□□ -0.31
SNRNP40-201ENST00000263694 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
SNRNP40-201ENST00000263694 ABCB7O75027 752 aa13.09□□□□□ -0.31
SNRNP40-201ENST00000263694 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
SNRNP40-201ENST00000263694 IQSEC2Q5JU85 1478 aa13.09□□□□□ -0.31
SNRNP40-201ENST00000263694 AATKQ6ZMQ8 1374 aa13.08□□□□□ -0.31
SNRNP40-201ENST00000263694 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
SNRNP40-201ENST00000263694 PHLPP1O60346 1717 aa13.07□□□□□ -0.32
SNRNP40-201ENST00000263694 GCP02774 474 aa13.07□□□□□ -0.32
SNRNP40-201ENST00000263694 PEAK1Q9H792 1746 aa13.07□□□□□ -0.32
SNRNP40-201ENST00000263694 AHDC1Q5TGY3 1603 aaPredicted RBP13.07□□□□□ -0.32
SNRNP40-201ENST00000263694 USP19O94966 1318 aa13.07□□□□□ -0.32
SNRNP40-201ENST00000263694 MAP3K19Q56UN5 1328 aa13.07□□□□□ -0.32
SNRNP40-201ENST00000263694 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
SNRNP40-201ENST00000263694 SLIT3O75094 1523 aa13.06□□□□□ -0.32
SNRNP40-201ENST00000263694 NFAT5O94916 1531 aa13.06□□□□□ -0.32
SNRNP40-201ENST00000263694 LTN1O94822 1766 aa13.05□□□□□ -0.32
SNRNP40-201ENST00000263694 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
SNRNP40-201ENST00000263694 HSP90AB2PQ58FF8 381 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms