RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 L1TD1Q5T7N2 865 aaKnown RBP15.89■□□□□ 0.13
LIG1-201ENST00000263274 SOX12O15370 315 aa15.88■□□□□ 0.13
LIG1-201ENST00000263274 NPATQ14207 1427 aa15.88■□□□□ 0.13
LIG1-201ENST00000263274 A0A0U1RQG5 324 aaPredicted RBP15.87■□□□□ 0.13
LIG1-201ENST00000263274 MCM4P33991 863 aa15.87■□□□□ 0.13
LIG1-201ENST00000263274 CHMP5Q9NZZ3 219 aa15.87■□□□□ 0.13
LIG1-201ENST00000263274 CDK19Q9BWU1 502 aa15.87■□□□□ 0.13
LIG1-201ENST00000263274 ANKRD36BQ8N2N9 1353 aa15.87■□□□□ 0.13
LIG1-201ENST00000263274 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
LIG1-201ENST00000263274 A0A1W2PP64 1363 aa15.87■□□□□ 0.13
LIG1-201ENST00000263274 FBXO31Q5XUX0 539 aaPredicted RBP15.86■□□□□ 0.13
LIG1-201ENST00000263274 MYOM2P54296 1465 aa15.86■□□□□ 0.13
LIG1-201ENST00000263274 RPGRIP1LQ68CZ1 1315 aa15.86■□□□□ 0.13
LIG1-201ENST00000263274 TRAK2O60296 914 aa15.86■□□□□ 0.13
LIG1-201ENST00000263274 WAPLQ7Z5K2 1190 aa15.86■□□□□ 0.13
LIG1-201ENST00000263274 SBNO2Q9Y2G9 1366 aa15.85■□□□□ 0.13
LIG1-201ENST00000263274 KIF1BO60333 1816 aa15.85■□□□□ 0.13
LIG1-201ENST00000263274 ANTXR1Q9H6X2 564 aa15.85■□□□□ 0.13
LIG1-201ENST00000263274 ZNF518AQ6AHZ1 1483 aa15.84■□□□□ 0.13
LIG1-201ENST00000263274 NUTM2FA1L443 756 aa15.84■□□□□ 0.13
LIG1-201ENST00000263274 PNNQ9H307 717 aaKnown RBP15.84■□□□□ 0.13
LIG1-201ENST00000263274 PANK2Q9BZ23 570 aa15.84■□□□□ 0.13
LIG1-201ENST00000263274 KIF16BQ96L93 1317 aa15.84■□□□□ 0.13
LIG1-201ENST00000263274 CHD1LQ86WJ1 897 aa15.83■□□□□ 0.12
LIG1-201ENST00000263274 DCTN1Q14203 1278 aa15.82■□□□□ 0.12
LIG1-201ENST00000263274 TSPYL6Q8N831 410 aa15.82■□□□□ 0.12
LIG1-201ENST00000263274 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
LIG1-201ENST00000263274 PHACTR3Q96KR7 559 aa15.82■□□□□ 0.12
LIG1-201ENST00000263274 ZBTB40Q9NUA8 1239 aa15.81■□□□□ 0.12
LIG1-201ENST00000263274 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
LIG1-201ENST00000263274 CT47B1P0C2W7 299 aaPredicted RBP15.81■□□□□ 0.12
LIG1-201ENST00000263274 HDAC1Q13547 482 aaPredicted RBP15.81■□□□□ 0.12
LIG1-201ENST00000263274 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
LIG1-201ENST00000263274 ZRANB1Q9UGI0 708 aa15.8■□□□□ 0.12
LIG1-201ENST00000263274 EFCAB6Q5THR3 1501 aa15.8■□□□□ 0.12
LIG1-201ENST00000263274 XRCC6P12956 609 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIG1-201ENST00000263274 NCLP19338 710 aaKnown RBP15.8■□□□□ 0.12
LIG1-201ENST00000263274 RRS1Q15050 365 aaKnown RBP15.79■□□□□ 0.12
LIG1-201ENST00000263274 FAM43AQ8N2R8 423 aa15.79■□□□□ 0.12
LIG1-201ENST00000263274 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
LIG1-201ENST00000263274 SMC5Q8IY18 1101 aa15.79■□□□□ 0.12
LIG1-201ENST00000263274 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
LIG1-201ENST00000263274 ZMYND15Q9H091 742 aa15.79■□□□□ 0.12
LIG1-201ENST00000263274 MROH2AA6NES4 1674 aa15.78■□□□□ 0.12
LIG1-201ENST00000263274 PPRC1Q5VV67 1664 aaKnown RBP15.77■□□□□ 0.12
LIG1-201ENST00000263274 FCHSD2O94868 740 aa15.77■□□□□ 0.12
LIG1-201ENST00000263274 RRAGDQ9NQL2 400 aaPredicted RBP15.77■□□□□ 0.12
LIG1-201ENST00000263274 NSD2O96028 1365 aa15.77■□□□□ 0.11
LIG1-201ENST00000263274 NUCB1Q02818 461 aa15.76■□□□□ 0.11
LIG1-201ENST00000263274 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
LIG1-201ENST00000263274 NME9Q86XW9 330 aa15.76■□□□□ 0.11
LIG1-201ENST00000263274 SLC52A1Q9NWF4 448 aa15.76■□□□□ 0.11
LIG1-201ENST00000263274 POLKQ9UBT6 870 aa15.76■□□□□ 0.11
LIG1-201ENST00000263274 NCKAP5LQ9HCH0 1330 aa15.76■□□□□ 0.11
LIG1-201ENST00000263274 PDE4CQ08493 712 aa15.75■□□□□ 0.11
LIG1-201ENST00000263274 ATAD2Q6PL18 1390 aa15.75■□□□□ 0.11
LIG1-201ENST00000263274 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
LIG1-201ENST00000263274 IQSEC2Q5JU85 1478 aa15.75■□□□□ 0.11
LIG1-201ENST00000263274 TRIM44Q96DX7 344 aaPredicted RBP15.75■□□□□ 0.11
LIG1-201ENST00000263274 QRICH2Q9H0J4 1663 aa15.74■□□□□ 0.11
LIG1-201ENST00000263274 DDX11L8A8MPP1 907 aa15.74■□□□□ 0.11
LIG1-201ENST00000263274 GNAI1P63096 354 aa15.74■□□□□ 0.11
LIG1-201ENST00000263274 NFE2L2Q16236 605 aa15.74■□□□□ 0.11
LIG1-201ENST00000263274 TXNDC2Q86VQ3 553 aa15.74■□□□□ 0.11
LIG1-201ENST00000263274 TNPO1Q92973 898 aaKnown RBP15.74■□□□□ 0.11
LIG1-201ENST00000263274 GBP4Q96PP9 640 aa15.74■□□□□ 0.11
LIG1-201ENST00000263274 DEPDC5O75140 1603 aa15.74■□□□□ 0.11
LIG1-201ENST00000263274 MBIPQ9NS73 344 aa15.73■□□□□ 0.11
LIG1-201ENST00000263274 KIAA1210Q9ULL0 1709 aa15.73■□□□□ 0.11
LIG1-201ENST00000263274 NLRP1Q9C000 1473 aa15.73■□□□□ 0.11
LIG1-201ENST00000263274 ABCC11Q96J66 1382 aa15.73■□□□□ 0.11
LIG1-201ENST00000263274 VAMP4O75379 141 aa15.73■□□□□ 0.11
LIG1-201ENST00000263274 VWDEQ8N2E2 1590 aa15.73■□□□□ 0.11
LIG1-201ENST00000263274 TBC1D9Q6ZT07 1266 aa15.73■□□□□ 0.11
LIG1-201ENST00000263274 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
LIG1-201ENST00000263274 C8orf58Q8NAV2 365 aa15.73■□□□□ 0.11
LIG1-201ENST00000263274 KRT24Q2M2I5 525 aa15.72■□□□□ 0.11
LIG1-201ENST00000263274 ALDH1L2Q3SY69 923 aa15.72■□□□□ 0.11
LIG1-201ENST00000263274 MROH1Q8NDA8 1641 aa15.72■□□□□ 0.11
LIG1-201ENST00000263274 SLC4A10Q6U841 1118 aa15.72■□□□□ 0.11
LIG1-201ENST00000263274 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
LIG1-201ENST00000263274 CALD1Q05682 793 aaKnown RBP15.72■□□□□ 0.11
LIG1-201ENST00000263274 FOXD4L5Q5VV16 416 aaPredicted RBP15.72■□□□□ 0.11
LIG1-201ENST00000263274 FOXD4L4Q8WXT5 416 aaPredicted RBP15.72■□□□□ 0.11
LIG1-201ENST00000263274 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
LIG1-201ENST00000263274 ADGRB3O60242 1522 aa15.71■□□□□ 0.11
LIG1-201ENST00000263274 C16orf71Q8IYS4 520 aaPredicted RBP15.71■□□□□ 0.11
LIG1-201ENST00000263274 COG3Q96JB2 828 aa15.71■□□□□ 0.11
LIG1-201ENST00000263274 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
LIG1-201ENST00000263274 IL16Q14005 1332 aa15.71■□□□□ 0.11
LIG1-201ENST00000263274 ARAP3Q8WWN8 1544 aa15.71■□□□□ 0.11
LIG1-201ENST00000263274 TULP4Q9NRJ4 1543 aa15.71■□□□□ 0.11
LIG1-201ENST00000263274 CD2BP2O95400 341 aaKnown RBP15.7■□□□□ 0.1
LIG1-201ENST00000263274 MRPL50Q8N5N7 158 aaKnown RBP15.7■□□□□ 0.1
LIG1-201ENST00000263274 PUS7Q96PZ0 661 aaKnown RBP15.7■□□□□ 0.1
LIG1-201ENST00000263274 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
LIG1-201ENST00000263274 KIDINS220Q9ULH0 1771 aa15.7■□□□□ 0.1
LIG1-201ENST00000263274 NRXN1Q9ULB1 1477 aa15.7■□□□□ 0.1
LIG1-201ENST00000263274 GOLGA6L22H0YM25 854 aa15.7■□□□□ 0.1
LIG1-201ENST00000263274 HSP90AA2PQ14568 343 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms