RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 LRRFIP1Q32MZ4 808 aaKnown RBP14.43□□□□□ -0.1
SMG6-201ENST00000263073 ZFYVE27Q5T4F4 411 aa14.43□□□□□ -0.1
SMG6-201ENST00000263073 CT47A1Q5JQC4 288 aaPredicted RBP14.43□□□□□ -0.1
SMG6-201ENST00000263073 DDX58O95786 925 aaKnown RBP14.43□□□□□ -0.1
SMG6-201ENST00000263073 NBPF1Q3BBV0 1214 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 LEKR1Q6ZMV7 388 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 MCM4P33991 863 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 SYCE3A1L190 88 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 RABEP1Q15276 862 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 NINLQ9Y2I6 1382 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 SERPINC1P01008 464 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 EPS15P42566 896 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 HSP90AB2PQ58FF8 381 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 NOL10Q9BSC4 688 aaKnown RBP14.42□□□□□ -0.1
SMG6-201ENST00000263073 TNMDQ9H2S6 317 aa14.42□□□□□ -0.1
SMG6-201ENST00000263073 LETM1O95202 739 aaPredicted RBP14.41□□□□□ -0.1
SMG6-201ENST00000263073 AMOTL1Q8IY63 956 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 TRIM34Q9BYJ4 488 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 UACAQ9BZF9 1416 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 CCDC112Q8NEF3 446 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 SIL1Q9H173 461 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 PRKAR2BP31323 418 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 RDXP35241 583 aaKnown RBP14.41□□□□□ -0.1
SMG6-201ENST00000263073 CAMK4Q16566 473 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 OFD1O75665 1012 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 JPH4Q96JJ6 628 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 PSMA5P28066 241 aa14.41□□□□□ -0.1
SMG6-201ENST00000263073 TRERF1Q96PN7 1200 aa14.4□□□□□ -0.1
SMG6-201ENST00000263073 IBSPP21815 317 aaPredicted RBP14.39□□□□□ -0.11
SMG6-201ENST00000263073 TWISTNBQ3B726 338 aaPredicted RBP14.39□□□□□ -0.11
SMG6-201ENST00000263073 RSPH4AQ5TD94 716 aa14.39□□□□□ -0.11
SMG6-201ENST00000263073 C20orf194Q5TEA3 1177 aa14.39□□□□□ -0.11
SMG6-201ENST00000263073 HMGN5P82970 282 aaKnown RBP14.39□□□□□ -0.11
SMG6-201ENST00000263073 XPCQ01831 940 aaPredicted RBP14.39□□□□□ -0.11
SMG6-201ENST00000263073 STK38Q15208 465 aa14.39□□□□□ -0.11
SMG6-201ENST00000263073 FILIP1Q7Z7B0 1213 aa14.39□□□□□ -0.11
SMG6-201ENST00000263073 CCDC192P0DO97 292 aa14.38□□□□□ -0.11
SMG6-201ENST00000263073 NBPF8Q3BBV2 869 aa14.38□□□□□ -0.11
SMG6-201ENST00000263073 CENPHQ9H3R5 247 aa14.38□□□□□ -0.11
SMG6-201ENST00000263073 HSP90AB4PQ58FF6 505 aa14.38□□□□□ -0.11
SMG6-201ENST00000263073 ME1P48163 572 aa14.38□□□□□ -0.11
SMG6-201ENST00000263073 CDR1P51861 262 aa14.37□□□□□ -0.11
SMG6-201ENST00000263073 PSME1Q06323 249 aa14.37□□□□□ -0.11
SMG6-201ENST00000263073 CLASRPQ8N2M8 674 aaKnown RBP14.37□□□□□ -0.11
SMG6-201ENST00000263073 CT47B1P0C2W7 299 aaPredicted RBP14.37□□□□□ -0.11
SMG6-201ENST00000263073 SLC4A2P04920 1241 aa14.37□□□□□ -0.11
SMG6-201ENST00000263073 FGD6Q6ZV73 1430 aa14.37□□□□□ -0.11
SMG6-201ENST00000263073 TMX1Q9H3N1 280 aa14.37□□□□□ -0.11
SMG6-201ENST00000263073 CFAP70Q5T0N1 1121 aa14.36□□□□□ -0.11
SMG6-201ENST00000263073 CTDP1Q9Y5B0 961 aaPredicted RBP14.36□□□□□ -0.11
SMG6-201ENST00000263073 CCDC43Q96MW1 224 aaKnown RBP14.36□□□□□ -0.11
SMG6-201ENST00000263073 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
SMG6-201ENST00000263073 RRP9O43818 475 aaKnown RBP14.36□□□□□ -0.11
SMG6-201ENST00000263073 ODF2Q5BJF6 829 aa14.36□□□□□ -0.11
SMG6-201ENST00000263073 CHD1LQ86WJ1 897 aa14.36□□□□□ -0.11
SMG6-201ENST00000263073 PNISRQ8TF01 805 aaKnown RBP14.36□□□□□ -0.11
SMG6-201ENST00000263073 DDX54Q8TDD1 881 aaKnown RBP14.36□□□□□ -0.11
SMG6-201ENST00000263073 ERCC4Q92889 916 aaPredicted RBP14.36□□□□□ -0.11
SMG6-201ENST00000263073 CCDC191Q8NCU4 936 aa14.35□□□□□ -0.11
SMG6-201ENST00000263073 LARP1BQ659C4 914 aaKnown RBP14.35□□□□□ -0.11
SMG6-201ENST00000263073 CWC27Q6UX04 472 aaKnown RBP14.34□□□□□ -0.11
SMG6-201ENST00000263073 ZHX1Q9UKY1 873 aaPredicted RBP14.34□□□□□ -0.11
SMG6-201ENST00000263073 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
SMG6-201ENST00000263073 PDCL2Q8N4E4 241 aa14.34□□□□□ -0.11
SMG6-201ENST00000263073 IL1RAPL2Q9NP60 686 aa14.34□□□□□ -0.11
SMG6-201ENST00000263073 GCC1Q96CN9 775 aa14.34□□□□□ -0.11
SMG6-201ENST00000263073 BRMS1Q9HCU9 246 aa14.34□□□□□ -0.11
SMG6-201ENST00000263073 CYP46A1Q9Y6A2 500 aa14.34□□□□□ -0.11
SMG6-201ENST00000263073 LARP6Q9BRS8 491 aaKnown RBP14.34□□□□□ -0.11
SMG6-201ENST00000263073 PDE3AQ14432 1141 aa14.33□□□□□ -0.12
SMG6-201ENST00000263073 MVPQ14764 893 aaKnown RBP14.33□□□□□ -0.12
SMG6-201ENST00000263073 SMARCE1Q969G3 411 aa14.33□□□□□ -0.12
SMG6-201ENST00000263073 SMARCA5O60264 1052 aaPredicted RBP14.33□□□□□ -0.12
SMG6-201ENST00000263073 GNAI2P04899 355 aa14.33□□□□□ -0.12
SMG6-201ENST00000263073 FILIP1LQ4L180 1135 aa14.33□□□□□ -0.12
SMG6-201ENST00000263073 SLC12A5Q9H2X9 1139 aa14.33□□□□□ -0.12
SMG6-201ENST00000263073 FERMT3Q86UX7 667 aa14.33□□□□□ -0.12
SMG6-201ENST00000263073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.33□□□□□ -0.124e-7■■■■■ 107.7
SMG6-201ENST00000263073 SMG6Q86US8 1419 aaKnown RBP14.33□□□□□ -0.12
SMG6-201ENST00000263073 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
SMG6-201ENST00000263073 DDX11Q96FC9 970 aa14.32□□□□□ -0.12
SMG6-201ENST00000263073 ZNF396Q96N95 335 aaPredicted RBP14.32□□□□□ -0.12
SMG6-201ENST00000263073 KIF21BO75037 1637 aa14.32□□□□□ -0.12
SMG6-201ENST00000263073 CCDC102AQ96A19 550 aa14.32□□□□□ -0.12
SMG6-201ENST00000263073 SPATA32Q96LK8 384 aa14.32□□□□□ -0.12
SMG6-201ENST00000263073 CWC22Q9HCG8 908 aaKnown RBP14.32□□□□□ -0.12
SMG6-201ENST00000263073 MAGEC2Q9UBF1 373 aaPredicted RBP14.32□□□□□ -0.12
SMG6-201ENST00000263073 WDR33Q9C0J8 1336 aaKnown RBP14.32□□□□□ -0.12
SMG6-201ENST00000263073 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
SMG6-201ENST00000263073 JAKMIP1Q96N16 626 aaKnown RBP14.31□□□□□ -0.12
SMG6-201ENST00000263073 LRRCC1Q9C099 1032 aa14.31□□□□□ -0.12
SMG6-201ENST00000263073 DCTN1Q14203 1278 aa14.31□□□□□ -0.12
SMG6-201ENST00000263073 CCDC30Q5VVM6 783 aa14.31□□□□□ -0.12
SMG6-201ENST00000263073 PIBF1Q8WXW3 757 aa14.31□□□□□ -0.12
SMG6-201ENST00000263073 ZFP91Q96JP5 570 aaPredicted RBP14.31□□□□□ -0.12
SMG6-201ENST00000263073 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
SMG6-201ENST00000263073 NLRP2Q9NX02 1062 aa14.31□□□□□ -0.12
SMG6-201ENST00000263073 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
SMG6-201ENST00000263073 MCM2P49736 904 aa14.31□□□□□ -0.12
SMG6-201ENST00000263073 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms