RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 ZKSCAN2Q63HK3 967 aa15.43■□□□□ 0.06
TTC39A-202ENST00000262676 SMC2O95347 1197 aa15.43■□□□□ 0.06
TTC39A-202ENST00000262676 LRRFIP1Q32MZ4 808 aaKnown RBP15.43■□□□□ 0.06
TTC39A-202ENST00000262676 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
TTC39A-202ENST00000262676 RRP1P56182 461 aaKnown RBP15.43■□□□□ 0.06
TTC39A-202ENST00000262676 CT47B1P0C2W7 299 aaPredicted RBP15.42■□□□□ 0.06
TTC39A-202ENST00000262676 MTERF4Q7Z6M4 381 aaKnown RBP15.42■□□□□ 0.06
TTC39A-202ENST00000262676 NAT10Q9H0A0 1025 aaKnown RBP15.42■□□□□ 0.06
TTC39A-202ENST00000262676 CABP4P57796 275 aa15.41■□□□□ 0.06
TTC39A-202ENST00000262676 BRPF1P55201 1214 aaPredicted RBP15.41■□□□□ 0.06
TTC39A-202ENST00000262676 SAFBQ15424 915 aaKnown RBP eCLIP15.41■□□□□ 0.06
TTC39A-202ENST00000262676 RNF20Q5VTR2 975 aa15.41■□□□□ 0.06
TTC39A-202ENST00000262676 ENOX2Q16206 610 aaKnown RBP15.41■□□□□ 0.06
TTC39A-202ENST00000262676 WWC2Q6AWC2 1192 aa15.41■□□□□ 0.06
TTC39A-202ENST00000262676 NEUROD6Q96NK8 337 aa15.41■□□□□ 0.06
TTC39A-202ENST00000262676 TRIM5Q9C035 493 aa15.41■□□□□ 0.06
TTC39A-202ENST00000262676 HSPA2P54652 639 aa15.4■□□□□ 0.06
TTC39A-202ENST00000262676 ZRSR2Q15696 482 aaKnown RBP15.4■□□□□ 0.06
TTC39A-202ENST00000262676 KIAA0754O94854 1291 aa15.4■□□□□ 0.06
TTC39A-202ENST00000262676 NUCB2P80303 420 aa15.4■□□□□ 0.06
TTC39A-202ENST00000262676 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
TTC39A-202ENST00000262676 NLRP13Q86W25 1043 aa15.4■□□□□ 0.06
TTC39A-202ENST00000262676 KIF6Q6ZMV9 814 aa15.4■□□□□ 0.06
TTC39A-202ENST00000262676 CDK19Q9BWU1 502 aa15.4■□□□□ 0.06
TTC39A-202ENST00000262676 CD109Q6YHK3 1445 aa15.39■□□□□ 0.05
TTC39A-202ENST00000262676 SPC24Q8NBT2 197 aa15.39■□□□□ 0.05
TTC39A-202ENST00000262676 WASHC2AQ641Q2 1341 aa15.39■□□□□ 0.05
TTC39A-202ENST00000262676 NFKBIBQ15653 356 aa15.38■□□□□ 0.05
TTC39A-202ENST00000262676 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
TTC39A-202ENST00000262676 SEPT7Q16181 437 aaKnown RBP15.38■□□□□ 0.05
TTC39A-202ENST00000262676 TMEM132AQ24JP5 1023 aa15.38■□□□□ 0.05
TTC39A-202ENST00000262676 WWC3Q9ULE0 1092 aa15.38■□□□□ 0.05
TTC39A-202ENST00000262676 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
TTC39A-202ENST00000262676 MRE11P49959 708 aa15.38■□□□□ 0.05
TTC39A-202ENST00000262676 SDF4Q9BRK5 362 aa15.38■□□□□ 0.05
TTC39A-202ENST00000262676 CABP1Q9NZU7 370 aa15.37■□□□□ 0.05
TTC39A-202ENST00000262676 APAF1O14727 1248 aa15.37■□□□□ 0.05
TTC39A-202ENST00000262676 RBM5P52756 815 aaKnown RBP eCLIP15.37■□□□□ 0.05
TTC39A-202ENST00000262676 FMNL2Q96PY5 1086 aa15.37■□□□□ 0.05
TTC39A-202ENST00000262676 ANKRD50Q9ULJ7 1429 aa15.37■□□□□ 0.05
TTC39A-202ENST00000262676 IKQ13123 557 aaPredicted RBP15.37■□□□□ 0.05
TTC39A-202ENST00000262676 FBXO31Q5XUX0 539 aaPredicted RBP15.37■□□□□ 0.05
TTC39A-202ENST00000262676 DMRT2Q9Y5R5 561 aa15.37■□□□□ 0.05
TTC39A-202ENST00000262676 USP47Q96K76 1375 aa15.36■□□□□ 0.05
TTC39A-202ENST00000262676 FANCIQ9NVI1 1328 aa15.36■□□□□ 0.05
TTC39A-202ENST00000262676 INTS3Q68E01 1043 aaKnown RBP15.36■□□□□ 0.05
TTC39A-202ENST00000262676 CAVIN1Q6NZI2 390 aaKnown RBP15.36■□□□□ 0.05
TTC39A-202ENST00000262676 CENPHQ9H3R5 247 aa15.36■□□□□ 0.05
TTC39A-202ENST00000262676 FAM193AP78312 1265 aa15.36■□□□□ 0.05
TTC39A-202ENST00000262676 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
TTC39A-202ENST00000262676 GOLGA6L10A6NI86 522 aa15.36■□□□□ 0.05
TTC39A-202ENST00000262676 FOXO3O43524 673 aa15.36■□□□□ 0.05
TTC39A-202ENST00000262676 BRPF3Q9ULD4 1205 aa15.35■□□□□ 0.05
TTC39A-202ENST00000262676 TAX1BP1Q86VP1 789 aa15.35■□□□□ 0.05
TTC39A-202ENST00000262676 SMARCE1Q969G3 411 aa15.35■□□□□ 0.05
TTC39A-202ENST00000262676 ERICH4A6NGS2 130 aa15.34■□□□□ 0.05
TTC39A-202ENST00000262676 TSPY26PQ9H489 355 aa15.34■□□□□ 0.05
TTC39A-202ENST00000262676 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
TTC39A-202ENST00000262676 E9PSI1 815 aa15.34■□□□□ 0.05
TTC39A-202ENST00000262676 ERLIN2O94905 339 aa15.34■□□□□ 0.05
TTC39A-202ENST00000262676 DYDC1Q8WWB3 177 aa15.34■□□□□ 0.05
TTC39A-202ENST00000262676 C22orf23Q9BZE7 217 aa15.34■□□□□ 0.05
TTC39A-202ENST00000262676 BRMS1Q9HCU9 246 aa15.34■□□□□ 0.05
TTC39A-202ENST00000262676 MYL6BP14649 208 aa15.34■□□□□ 0.05
TTC39A-202ENST00000262676 G3BP1Q13283 466 aaKnown RBP eCLIP15.34■□□□□ 0.05
TTC39A-202ENST00000262676 MAGEC2Q9UBF1 373 aaPredicted RBP15.34■□□□□ 0.05
TTC39A-202ENST00000262676 PHLDB1Q86UU1 1377 aa15.33■□□□□ 0.05
TTC39A-202ENST00000262676 GOLGA6L7A0A1B0GV03 622 aa15.33■□□□□ 0.05
TTC39A-202ENST00000262676 MYBBP1AQ9BQG0 1328 aaKnown RBP15.33■□□□□ 0.05
TTC39A-202ENST00000262676 SMG6Q86US8 1419 aaKnown RBP15.33■□□□□ 0.04
TTC39A-202ENST00000262676 MPNDQ8N594 471 aa15.33■□□□□ 0.04
TTC39A-202ENST00000262676 WAPLQ7Z5K2 1190 aa15.32■□□□□ 0.04
TTC39A-202ENST00000262676 STK11IPQ8N1F8 1099 aa15.32■□□□□ 0.04
TTC39A-202ENST00000262676 POLA1P09884 1462 aaPredicted RBP15.32■□□□□ 0.04
TTC39A-202ENST00000262676 SYCP1Q15431 976 aa15.32■□□□□ 0.04
TTC39A-202ENST00000262676 C8orf37Q96NL8 207 aa15.32■□□□□ 0.04
TTC39A-202ENST00000262676 DDX19BQ9UMR2 479 aa15.32■□□□□ 0.04
TTC39A-202ENST00000262676 FILIP1LQ4L180 1135 aa15.32■□□□□ 0.04
TTC39A-202ENST00000262676 WASHC4Q2M389 1173 aa15.32■□□□□ 0.04
TTC39A-202ENST00000262676 RALYLQ86SE5 291 aaKnown RBP15.32■□□□□ 0.04
TTC39A-202ENST00000262676 TRAK2O60296 914 aa15.31■□□□□ 0.04
TTC39A-202ENST00000262676 ATP2B1P20020 1258 aa15.31■□□□□ 0.04
TTC39A-202ENST00000262676 LNPKQ9C0E8 428 aa15.31■□□□□ 0.04
TTC39A-202ENST00000262676 CCP110O43303 1012 aa15.31■□□□□ 0.04
TTC39A-202ENST00000262676 IBSPP21815 317 aaPredicted RBP15.31■□□□□ 0.04
TTC39A-202ENST00000262676 GRM1Q13255 1194 aa15.31■□□□□ 0.04
TTC39A-202ENST00000262676 FAM177A1Q8N128 213 aaPredicted RBP15.31■□□□□ 0.04
TTC39A-202ENST00000262676 MTHFSP49914 203 aa15.31■□□□□ 0.04
TTC39A-202ENST00000262676 TAF3Q5VWG9 929 aa15.31■□□□□ 0.04
TTC39A-202ENST00000262676 CLASRPQ8N2M8 674 aaKnown RBP15.31■□□□□ 0.04
TTC39A-202ENST00000262676 RRS1Q15050 365 aaKnown RBP15.31■□□□□ 0.04
TTC39A-202ENST00000262676 ZNF530Q6P9A1 599 aaPredicted RBP15.31■□□□□ 0.04
TTC39A-202ENST00000262676 TOM1O60784 492 aa15.3■□□□□ 0.04
TTC39A-202ENST00000262676 CEBPZQ03701 1054 aaKnown RBP15.3■□□□□ 0.04
TTC39A-202ENST00000262676 CCDC181Q5TID7 509 aa15.3■□□□□ 0.04
TTC39A-202ENST00000262676 IL27Q8NEV9 243 aa15.3■□□□□ 0.04
TTC39A-202ENST00000262676 CFTRP13569 1480 aa15.3■□□□□ 0.04
TTC39A-202ENST00000262676 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
TTC39A-202ENST00000262676 ATP2B2Q01814 1243 aa15.3■□□□□ 0.04
TTC39A-202ENST00000262676 ANKRD18AQ8IVF6 992 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms