RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 C19orf44Q9H6X5 657 aa17.42■□□□□ 0.38
VAMP7-201ENST00000262640 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
VAMP7-201ENST00000262640 CFAP53Q96M91 514 aa17.41■□□□□ 0.38
VAMP7-201ENST00000262640 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
VAMP7-201ENST00000262640 MTHFSP49914 203 aa17.41■□□□□ 0.38
VAMP7-201ENST00000262640 PHF8Q9UPP1 1060 aa17.41■□□□□ 0.38
VAMP7-201ENST00000262640 DCCP43146 1447 aa17.4■□□□□ 0.38
VAMP7-201ENST00000262640 ZBED9Q6R2W3 1325 aa17.4■□□□□ 0.38
VAMP7-201ENST00000262640 COG3Q96JB2 828 aa17.4■□□□□ 0.38
VAMP7-201ENST00000262640 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
VAMP7-201ENST00000262640 BLMP54132 1417 aaPredicted RBP17.39■□□□□ 0.37
VAMP7-201ENST00000262640 ADAMTS8Q9UP79 889 aa17.38■□□□□ 0.37
VAMP7-201ENST00000262640 ESCO1Q5FWF5 840 aa17.37■□□□□ 0.37
VAMP7-201ENST00000262640 AATKQ6ZMQ8 1374 aa17.36■□□□□ 0.37
VAMP7-201ENST00000262640 ATF3P18847 181 aa17.36■□□□□ 0.37
VAMP7-201ENST00000262640 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
VAMP7-201ENST00000262640 OVOS2A0A0J9YW53 1432 aa17.36■□□□□ 0.37
VAMP7-201ENST00000262640 OVOS2Q6IE36 1432 aa17.36■□□□□ 0.37
VAMP7-201ENST00000262640 C1orf167Q5SNV9 1468 aa17.35■□□□□ 0.37
VAMP7-201ENST00000262640 ZNF335Q9H4Z2 1342 aaPredicted RBP17.35■□□□□ 0.37
VAMP7-201ENST00000262640 MSH6P52701 1360 aa17.34■□□□□ 0.37
VAMP7-201ENST00000262640 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
VAMP7-201ENST00000262640 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
VAMP7-201ENST00000262640 SHPRHQ149N8 1683 aa17.33■□□□□ 0.37
VAMP7-201ENST00000262640 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.36
VAMP7-201ENST00000262640 CADPS2Q86UW7 1296 aa17.33■□□□□ 0.36
VAMP7-201ENST00000262640 MST1RQ04912 1400 aa17.33■□□□□ 0.36
VAMP7-201ENST00000262640 PNPLA6Q8IY17 1366 aa17.33■□□□□ 0.36
VAMP7-201ENST00000262640 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
VAMP7-201ENST00000262640 COL3A1P02461 1466 aaPredicted RBP17.32■□□□□ 0.36
VAMP7-201ENST00000262640 KIF1AQ12756 1690 aa17.32■□□□□ 0.36
VAMP7-201ENST00000262640 ORAI2Q96SN7 254 aa17.31■□□□□ 0.36
VAMP7-201ENST00000262640 PIK3C2AO00443 1686 aa17.3■□□□□ 0.36
VAMP7-201ENST00000262640 PSME1Q06323 249 aa17.3■□□□□ 0.36
VAMP7-201ENST00000262640 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
VAMP7-201ENST00000262640 XIRP1Q702N8 1843 aaKnown RBP17.3■□□□□ 0.36
VAMP7-201ENST00000262640 CDK12Q9NYV4 1490 aaPredicted RBP17.29■□□□□ 0.36
VAMP7-201ENST00000262640 USP54Q70EL1 1684 aa17.29■□□□□ 0.36
VAMP7-201ENST00000262640 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
VAMP7-201ENST00000262640 FBLN1P23142 703 aa17.28■□□□□ 0.36
VAMP7-201ENST00000262640 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
VAMP7-201ENST00000262640 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.36
VAMP7-201ENST00000262640 MAP2P11137 1827 aaKnown RBP17.27■□□□□ 0.35
VAMP7-201ENST00000262640 PPM1GO15355 546 aaPredicted RBP17.27■□□□□ 0.35
VAMP7-201ENST00000262640 NLRP6P59044 892 aa17.27■□□□□ 0.35
VAMP7-201ENST00000262640 ABTB2Q8N961 1025 aa17.27■□□□□ 0.35
VAMP7-201ENST00000262640 FOXO3O43524 673 aa17.26■□□□□ 0.35
VAMP7-201ENST00000262640 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
VAMP7-201ENST00000262640 U2AF1L5P0DN76 240 aaPredicted RBP17.25■□□□□ 0.35
VAMP7-201ENST00000262640 U2AF1Q01081 240 aaKnown RBP eCLIP17.25■□□□□ 0.35
VAMP7-201ENST00000262640 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
VAMP7-201ENST00000262640 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
VAMP7-201ENST00000262640 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
VAMP7-201ENST00000262640 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
VAMP7-201ENST00000262640 RUNDC1Q96C34 613 aa17.23■□□□□ 0.35
VAMP7-201ENST00000262640 U2SURPO15042 1029 aaKnown RBP17.23■□□□□ 0.35
VAMP7-201ENST00000262640 PDE3BQ13370 1112 aa17.23■□□□□ 0.35
VAMP7-201ENST00000262640 MARF1Q9Y4F3 1742 aaKnown RBP17.22■□□□□ 0.35
VAMP7-201ENST00000262640 TRPM3Q9HCF6 1732 aaPredicted RBP17.22■□□□□ 0.35
VAMP7-201ENST00000262640 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
VAMP7-201ENST00000262640 NUTM2GQ5VZR2 741 aa17.21■□□□□ 0.35
VAMP7-201ENST00000262640 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.34
VAMP7-201ENST00000262640 APAF1O14727 1248 aa17.21■□□□□ 0.34
VAMP7-201ENST00000262640 IL13P35225 146 aa17.2■□□□□ 0.34
VAMP7-201ENST00000262640 XPCQ01831 940 aaPredicted RBP17.2■□□□□ 0.34
VAMP7-201ENST00000262640 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
VAMP7-201ENST00000262640 KIF24Q5T7B8 1368 aa17.2■□□□□ 0.34
VAMP7-201ENST00000262640 MAP3K19Q56UN5 1328 aa17.2■□□□□ 0.34
VAMP7-201ENST00000262640 SOX12O15370 315 aa17.2■□□□□ 0.34
VAMP7-201ENST00000262640 PNNQ9H307 717 aaKnown RBP17.2■□□□□ 0.34
VAMP7-201ENST00000262640 SLAIN2Q9P270 581 aa17.19■□□□□ 0.34
VAMP7-201ENST00000262640 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
VAMP7-201ENST00000262640 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
VAMP7-201ENST00000262640 FLT4P35916 1363 aa17.18■□□□□ 0.34
VAMP7-201ENST00000262640 KCNH5Q8NCM2 988 aa17.18■□□□□ 0.34
VAMP7-201ENST00000262640 FCHSD2O94868 740 aa17.17■□□□□ 0.34
VAMP7-201ENST00000262640 BRINP3Q76B58 766 aa17.17■□□□□ 0.34
VAMP7-201ENST00000262640 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
VAMP7-201ENST00000262640 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
VAMP7-201ENST00000262640 GTF3C3Q9Y5Q9 886 aa17.16■□□□□ 0.34
VAMP7-201ENST00000262640 AMPHP49418 695 aa17.16■□□□□ 0.34
VAMP7-201ENST00000262640 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
VAMP7-201ENST00000262640 PLEKHF1Q96S99 279 aa17.16■□□□□ 0.34
VAMP7-201ENST00000262640 NFAT5O94916 1531 aa17.16■□□□□ 0.34
VAMP7-201ENST00000262640 USP19O94966 1318 aa17.16■□□□□ 0.34
VAMP7-201ENST00000262640 SLIT3O75094 1523 aa17.15■□□□□ 0.34
VAMP7-201ENST00000262640 PXDNQ92626 1479 aa17.15■□□□□ 0.34
VAMP7-201ENST00000262640 ALS2Q96Q42 1657 aa17.15■□□□□ 0.34
VAMP7-201ENST00000262640 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
VAMP7-201ENST00000262640 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
VAMP7-201ENST00000262640 LTBP4Q8N2S1 1624 aa17.15■□□□□ 0.34
VAMP7-201ENST00000262640 HSP90AB2PQ58FF8 381 aa17.14■□□□□ 0.34
VAMP7-201ENST00000262640 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.34
VAMP7-201ENST00000262640 MAPK8IP3Q9UPT6 1336 aa17.14■□□□□ 0.33
VAMP7-201ENST00000262640 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
VAMP7-201ENST00000262640 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
VAMP7-201ENST00000262640 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
VAMP7-201ENST00000262640 HOXC9P31274 260 aa17.12■□□□□ 0.33
VAMP7-201ENST00000262640 NEFMP07197 916 aa17.12■□□□□ 0.33
VAMP7-201ENST00000262640 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms