RNA–Protein interactions for RNA: ENST00000262613.9

SLC9A3R1-201, Transcript of SLC9A3 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-201ENST00000262613 RNF123Q5XPI4 1314 aa27.86■■■□□ 2.05
SLC9A3R1-201ENST00000262613 ACEP12821 1306 aa27.85■■■□□ 2.05
SLC9A3R1-201ENST00000262613 PROSER2Q86WR7 435 aaPredicted RBP27.84■■■□□ 2.05
SLC9A3R1-201ENST00000262613 GGNBP2Q9H3C7 697 aa27.84■■■□□ 2.05
SLC9A3R1-201ENST00000262613 B4GALNT3Q6L9W6 998 aa27.84■■■□□ 2.05
SLC9A3R1-201ENST00000262613 BCL11AQ9H165 835 aa27.82■■■□□ 2.04
SLC9A3R1-201ENST00000262613 POLR3AO14802 1390 aaPredicted RBP27.82■■■□□ 2.04
SLC9A3R1-201ENST00000262613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.82■■■□□ 2.04
SLC9A3R1-201ENST00000262613 USP6P35125 1406 aa27.81■■■□□ 2.04
SLC9A3R1-201ENST00000262613 NUDCQ9Y266 331 aa27.8■■■□□ 2.04
SLC9A3R1-201ENST00000262613 TNNT2P45379 298 aaPredicted RBP27.79■■■□□ 2.04
SLC9A3R1-201ENST00000262613 ERICH6Q7L0X2 663 aa27.79■■■□□ 2.04
SLC9A3R1-201ENST00000262613 C14orf37Q86TY3 774 aa27.79■■■□□ 2.04
SLC9A3R1-201ENST00000262613 PMFBP1Q8TBY8 1022 aa27.78■■■□□ 2.04
SLC9A3R1-201ENST00000262613 NCOA3Q9Y6Q9 1424 aa27.77■■■□□ 2.04
SLC9A3R1-201ENST00000262613 SSH2Q76I76 1423 aa27.77■■■□□ 2.04
SLC9A3R1-201ENST00000262613 TMEM94Q12767 1356 aa27.76■■■□□ 2.03
SLC9A3R1-201ENST00000262613 NME9Q86XW9 330 aa27.75■■■□□ 2.03
SLC9A3R1-201ENST00000262613 TTC21BQ7Z4L5 1316 aa27.74■■■□□ 2.03
SLC9A3R1-201ENST00000262613 INSRP06213 1382 aa27.74■■■□□ 2.03
SLC9A3R1-201ENST00000262613 NGDNQ8NEJ9 315 aaKnown RBP27.73■■■□□ 2.03
SLC9A3R1-201ENST00000262613 C19orf44Q9H6X5 657 aa27.72■■■□□ 2.03
SLC9A3R1-201ENST00000262613 MTHFSP49914 203 aa27.71■■■□□ 2.03
SLC9A3R1-201ENST00000262613 XIRP1Q702N8 1843 aaKnown RBP27.7■■■□□ 2.03
SLC9A3R1-201ENST00000262613 BLMP54132 1417 aaPredicted RBP27.7■■■□□ 2.02
SLC9A3R1-201ENST00000262613 ZRANB1Q9UGI0 708 aa27.69■■■□□ 2.02
SLC9A3R1-201ENST00000262613 PHF8Q9UPP1 1060 aa27.69■■■□□ 2.02
SLC9A3R1-201ENST00000262613 DCCP43146 1447 aa27.69■■■□□ 2.02
SLC9A3R1-201ENST00000262613 SHPRHQ149N8 1683 aa27.69■■■□□ 2.02
SLC9A3R1-201ENST00000262613 TTC21AQ8NDW8 1320 aa27.67■■■□□ 2.02
SLC9A3R1-201ENST00000262613 WDR43Q15061 677 aaKnown RBP eCLIP27.67■■■□□ 2.02
SLC9A3R1-201ENST00000262613 COG3Q96JB2 828 aa27.66■■■□□ 2.02
SLC9A3R1-201ENST00000262613 ADAMTS8Q9UP79 889 aa27.66■■■□□ 2.02
SLC9A3R1-201ENST00000262613 ZNF335Q9H4Z2 1342 aaPredicted RBP27.66■■■□□ 2.02
SLC9A3R1-201ENST00000262613 OVOS2A0A0J9YW53 1432 aa27.66■■■□□ 2.02
SLC9A3R1-201ENST00000262613 OVOS2Q6IE36 1432 aa27.66■■■□□ 2.02
SLC9A3R1-201ENST00000262613 LRRC7Q96NW7 1537 aa27.65■■■□□ 2.02
SLC9A3R1-201ENST00000262613 C1orf167Q5SNV9 1468 aa27.65■■■□□ 2.02
SLC9A3R1-201ENST00000262613 ESCO1Q5FWF5 840 aa27.64■■■□□ 2.02
SLC9A3R1-201ENST00000262613 PIK3C2AO00443 1686 aa27.64■■■□□ 2.01
SLC9A3R1-201ENST00000262613 CFAP53Q96M91 514 aa27.63■■■□□ 2.01
SLC9A3R1-201ENST00000262613 DMRT2Q9Y5R5 561 aa27.63■■■□□ 2.01
SLC9A3R1-201ENST00000262613 AATKQ6ZMQ8 1374 aa27.63■■■□□ 2.01
SLC9A3R1-201ENST00000262613 MAP2P11137 1827 aaKnown RBP27.62■■■□□ 2.01
SLC9A3R1-201ENST00000262613 COL3A1P02461 1466 aaPredicted RBP27.62■■■□□ 2.01
SLC9A3R1-201ENST00000262613 MST1RQ04912 1400 aa27.62■■■□□ 2.01
SLC9A3R1-201ENST00000262613 KIF1AQ12756 1690 aa27.61■■■□□ 2.01
SLC9A3R1-201ENST00000262613 ATF3P18847 181 aa27.6■■■□□ 2.01
SLC9A3R1-201ENST00000262613 ORAI2Q96SN7 254 aa27.6■■■□□ 2.01
SLC9A3R1-201ENST00000262613 USP31Q70CQ4 1352 aa27.6■■■□□ 2.01
SLC9A3R1-201ENST00000262613 USP54Q70EL1 1684 aa27.59■■■□□ 2.01
SLC9A3R1-201ENST00000262613 MSH6P52701 1360 aa27.59■■■□□ 2.01
SLC9A3R1-201ENST00000262613 PNPLA6Q8IY17 1366 aa27.59■■■□□ 2.01
SLC9A3R1-201ENST00000262613 POLKQ9UBT6 870 aa27.59■■■□□ 2.01
SLC9A3R1-201ENST00000262613 FBLN1P23142 703 aa27.58■■■□□ 2.01
SLC9A3R1-201ENST00000262613 CADPS2Q86UW7 1296 aa27.57■■■□□ 2
SLC9A3R1-201ENST00000262613 MARF1Q9Y4F3 1742 aaKnown RBP27.56■■■□□ 2
SLC9A3R1-201ENST00000262613 CCDC136Q96JN2 1154 aa27.55■■■□□ 2
SLC9A3R1-201ENST00000262613 SENP3-EIF4A1A0A087X0R7 540 aa27.53■■■□□ 2
SLC9A3R1-201ENST00000262613 NOP58Q9Y2X3 529 aaKnown RBP27.53■■■□□ 2
SLC9A3R1-201ENST00000262613 CDK12Q9NYV4 1490 aaPredicted RBP27.53■■■□□ 2
SLC9A3R1-201ENST00000262613 PSME1Q06323 249 aa27.52■■■□□ 2
SLC9A3R1-201ENST00000262613 PDE3BQ13370 1112 aa27.52■■■□□ 2
SLC9A3R1-201ENST00000262613 EMILIN1Q9Y6C2 1016 aa27.52■■■□□ 2
SLC9A3R1-201ENST00000262613 TRPM3Q9HCF6 1732 aaPredicted RBP27.5■■□□□ 1.99
SLC9A3R1-201ENST00000262613 FOXO3O43524 673 aa27.49■■□□□ 1.99
SLC9A3R1-201ENST00000262613 PAK3O75914 559 aaPredicted RBP27.49■■□□□ 1.99
SLC9A3R1-201ENST00000262613 RRS1Q15050 365 aaKnown RBP27.49■■□□□ 1.99
SLC9A3R1-201ENST00000262613 NLRP6P59044 892 aa27.48■■□□□ 1.99
SLC9A3R1-201ENST00000262613 ABTB2Q8N961 1025 aa27.48■■□□□ 1.99
SLC9A3R1-201ENST00000262613 PPM1GO15355 546 aaPredicted RBP27.47■■□□□ 1.99
SLC9A3R1-201ENST00000262613 CCDC146Q8IYE0 955 aa27.47■■□□□ 1.99
SLC9A3R1-201ENST00000262613 DIAPH1O60610 1272 aaKnown RBP27.46■■□□□ 1.99
SLC9A3R1-201ENST00000262613 PEAK1Q9H792 1746 aa27.46■■□□□ 1.99
SLC9A3R1-201ENST00000262613 NUTM2GQ5VZR2 741 aa27.44■■□□□ 1.98
SLC9A3R1-201ENST00000262613 SALL2Q9Y467 1007 aaPredicted RBP27.43■■□□□ 1.98
SLC9A3R1-201ENST00000262613 U2AF1L5P0DN76 240 aaPredicted RBP27.42■■□□□ 1.98
SLC9A3R1-201ENST00000262613 U2AF1Q01081 240 aaKnown RBP eCLIP27.42■■□□□ 1.98
SLC9A3R1-201ENST00000262613 XPCQ01831 940 aaPredicted RBP27.42■■□□□ 1.98
SLC9A3R1-201ENST00000262613 KRT28Q7Z3Y7 464 aa27.42■■□□□ 1.98
SLC9A3R1-201ENST00000262613 RRP1P56182 461 aaKnown RBP27.41■■□□□ 1.98
SLC9A3R1-201ENST00000262613 U2SURPO15042 1029 aaKnown RBP27.4■■□□□ 1.98
SLC9A3R1-201ENST00000262613 SOX12O15370 315 aa27.4■■□□□ 1.98
SLC9A3R1-201ENST00000262613 ALS2Q96Q42 1657 aa27.4■■□□□ 1.98
SLC9A3R1-201ENST00000262613 IQSEC2Q5JU85 1478 aa27.39■■□□□ 1.98
SLC9A3R1-201ENST00000262613 RUNDC1Q96C34 613 aa27.39■■□□□ 1.98
SLC9A3R1-201ENST00000262613 MAP3K19Q56UN5 1328 aa27.39■■□□□ 1.98
SLC9A3R1-201ENST00000262613 APAF1O14727 1248 aa27.39■■□□□ 1.97
SLC9A3R1-201ENST00000262613 IL13P35225 146 aa27.39■■□□□ 1.97
SLC9A3R1-201ENST00000262613 ANP32AP39687 249 aaKnown RBP27.38■■□□□ 1.97
SLC9A3R1-201ENST00000262613 LTBP4Q8N2S1 1624 aa27.37■■□□□ 1.97
SLC9A3R1-201ENST00000262613 NFAT5O94916 1531 aa27.37■■□□□ 1.97
SLC9A3R1-201ENST00000262613 IPO9Q96P70 1041 aaKnown RBP27.37■■□□□ 1.97
SLC9A3R1-201ENST00000262613 NPHP3Q7Z494 1330 aa27.36■■□□□ 1.97
SLC9A3R1-201ENST00000262613 SBNO1A3KN83 1393 aa27.36■■□□□ 1.97
SLC9A3R1-201ENST00000262613 BRINP3Q76B58 766 aa27.36■■□□□ 1.97
SLC9A3R1-201ENST00000262613 PXDNQ92626 1479 aa27.35■■□□□ 1.97
SLC9A3R1-201ENST00000262613 SLAIN2Q9P270 581 aa27.35■■□□□ 1.97
SLC9A3R1-201ENST00000262613 SLIT3O75094 1523 aa27.35■■□□□ 1.97
SLC9A3R1-201ENST00000262613 DDX17Q92841 729 aaKnown RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms