RNA–Protein interactions for RNA: ENST00000262429.8

ATP2C2-201, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2C2, Length 3,376 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-201ENST00000262429 UBE2Q2Q8WVN8 375 aa16.48■□□□□ 0.23
ATP2C2-201ENST00000262429 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
ATP2C2-201ENST00000262429 ARHGAP23Q9P227 1491 aa16.47■□□□□ 0.23
ATP2C2-201ENST00000262429 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
ATP2C2-201ENST00000262429 GOLGA2Q08379 1002 aa16.47■□□□□ 0.23
ATP2C2-201ENST00000262429 FAM135BQ49AJ0 1406 aa16.46■□□□□ 0.23
ATP2C2-201ENST00000262429 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.23
ATP2C2-201ENST00000262429 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.23
ATP2C2-201ENST00000262429 C20orf194Q5TEA3 1177 aa16.46■□□□□ 0.23
ATP2C2-201ENST00000262429 SLIT1O75093 1534 aa16.46■□□□□ 0.23
ATP2C2-201ENST00000262429 NSD2O96028 1365 aa16.46■□□□□ 0.23
ATP2C2-201ENST00000262429 SLFN5Q08AF3 891 aa16.46■□□□□ 0.23
ATP2C2-201ENST00000262429 TCP11L2Q8N4U5 519 aa16.46■□□□□ 0.22
ATP2C2-201ENST00000262429 KIF20BQ96Q89 1820 aa16.46■□□□□ 0.22
ATP2C2-201ENST00000262429 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
ATP2C2-201ENST00000262429 THEMISQ8N1K5 641 aaPredicted RBP16.45■□□□□ 0.22
ATP2C2-201ENST00000262429 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
ATP2C2-201ENST00000262429 ATP7BP35670 1465 aa16.45■□□□□ 0.22
ATP2C2-201ENST00000262429 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
ATP2C2-201ENST00000262429 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
ATP2C2-201ENST00000262429 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
ATP2C2-201ENST00000262429 EMILIN1Q9Y6C2 1016 aa16.43■□□□□ 0.22
ATP2C2-201ENST00000262429 COL3A1P02461 1466 aaPredicted RBP16.43■□□□□ 0.22
ATP2C2-201ENST00000262429 SIRT1Q96EB6 747 aa16.43■□□□□ 0.22
ATP2C2-201ENST00000262429 IPO9Q96P70 1041 aaKnown RBP16.43■□□□□ 0.22
ATP2C2-201ENST00000262429 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
ATP2C2-201ENST00000262429 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
ATP2C2-201ENST00000262429 TRMT2AQ8IZ69 625 aaKnown RBP16.42■□□□□ 0.22
ATP2C2-201ENST00000262429 PMFBP1Q8TBY8 1022 aa16.42■□□□□ 0.22
ATP2C2-201ENST00000262429 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
ATP2C2-201ENST00000262429 MAP2P11137 1827 aaKnown RBP16.42■□□□□ 0.22
ATP2C2-201ENST00000262429 KCNA6P17658 529 aa16.41■□□□□ 0.22
ATP2C2-201ENST00000262429 CEP170BQ9Y4F5 1589 aaPredicted RBP16.41■□□□□ 0.22
ATP2C2-201ENST00000262429 NKTRP30414 1462 aaKnown RBP16.41■□□□□ 0.22
ATP2C2-201ENST00000262429 RRS1Q15050 365 aaKnown RBP16.41■□□□□ 0.22
ATP2C2-201ENST00000262429 RGPD8O14715 1765 aaPredicted RBP16.41■□□□□ 0.22
ATP2C2-201ENST00000262429 IQSEC2Q5JU85 1478 aa16.41■□□□□ 0.22
ATP2C2-201ENST00000262429 EIF5BO60841 1220 aaKnown RBP16.4■□□□□ 0.22
ATP2C2-201ENST00000262429 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
ATP2C2-201ENST00000262429 CDC42BPGQ6DT37 1551 aa16.39■□□□□ 0.21
ATP2C2-201ENST00000262429 BCAR3O75815 825 aa16.39■□□□□ 0.21
ATP2C2-201ENST00000262429 ACEP12821 1306 aa16.39■□□□□ 0.21
ATP2C2-201ENST00000262429 PLEKHF1Q96S99 279 aa16.38■□□□□ 0.21
ATP2C2-201ENST00000262429 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
ATP2C2-201ENST00000262429 ADAMTSL3P82987 1691 aa16.37■□□□□ 0.21
ATP2C2-201ENST00000262429 EDC4Q6P2E9 1401 aaKnown RBP16.37■□□□□ 0.21
ATP2C2-201ENST00000262429 SOX12O15370 315 aa16.37■□□□□ 0.21
ATP2C2-201ENST00000262429 AKAP12Q02952 1782 aa16.37■□□□□ 0.21
ATP2C2-201ENST00000262429 MON2Q7Z3U7 1717 aa16.37■□□□□ 0.21
ATP2C2-201ENST00000262429 HMOX1P09601 288 aa16.36■□□□□ 0.21
ATP2C2-201ENST00000262429 DIAPH1O60610 1272 aaKnown RBP16.35■□□□□ 0.21
ATP2C2-201ENST00000262429 ITSN1Q15811 1721 aa16.35■□□□□ 0.21
ATP2C2-201ENST00000262429 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
ATP2C2-201ENST00000262429 PHF23Q9BUL5 403 aaPredicted RBP16.35■□□□□ 0.21
ATP2C2-201ENST00000262429 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
ATP2C2-201ENST00000262429 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
ATP2C2-201ENST00000262429 TOPAZ1Q8N9V7 1692 aa16.34■□□□□ 0.21
ATP2C2-201ENST00000262429 E9PSI1 815 aa16.34■□□□□ 0.21
ATP2C2-201ENST00000262429 TTC21BQ7Z4L5 1316 aa16.33■□□□□ 0.2
ATP2C2-201ENST00000262429 COG3Q96JB2 828 aa16.32■□□□□ 0.2
ATP2C2-201ENST00000262429 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
ATP2C2-201ENST00000262429 XRN1Q8IZH2 1706 aaKnown RBP16.32■□□□□ 0.2
ATP2C2-201ENST00000262429 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
ATP2C2-201ENST00000262429 PHACTR3Q96KR7 559 aa16.32■□□□□ 0.2
ATP2C2-201ENST00000262429 DIP2AQ14689 1571 aa16.32■□□□□ 0.2
ATP2C2-201ENST00000262429 TMPOP42166 694 aaKnown RBP16.31■□□□□ 0.2
ATP2C2-201ENST00000262429 PLEKHG3A1L390 1219 aa16.31■□□□□ 0.2
ATP2C2-201ENST00000262429 NEFMP07197 916 aa16.31■□□□□ 0.2
ATP2C2-201ENST00000262429 ANKLE2Q86XL3 938 aa16.31■□□□□ 0.2
ATP2C2-201ENST00000262429 BCL2L13Q9BXK5 485 aa16.31■□□□□ 0.2
ATP2C2-201ENST00000262429 NUTM2GQ5VZR2 741 aa16.3■□□□□ 0.2
ATP2C2-201ENST00000262429 TNNQ9UQP3 1299 aa16.3■□□□□ 0.2
ATP2C2-201ENST00000262429 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
ATP2C2-201ENST00000262429 NRKQ7Z2Y5 1582 aa16.3■□□□□ 0.2
ATP2C2-201ENST00000262429 PRKAR2BP31323 418 aa16.29■□□□□ 0.2
ATP2C2-201ENST00000262429 IL13P35225 146 aa16.29■□□□□ 0.2
ATP2C2-201ENST00000262429 USP6P35125 1406 aa16.29■□□□□ 0.2
ATP2C2-201ENST00000262429 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
ATP2C2-201ENST00000262429 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
ATP2C2-201ENST00000262429 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
ATP2C2-201ENST00000262429 LAS1LQ9Y4W2 734 aaKnown RBP16.29■□□□□ 0.2
ATP2C2-201ENST00000262429 LRRC7Q96NW7 1537 aa16.29■□□□□ 0.2
ATP2C2-201ENST00000262429 THUMPD2Q9BTF0 503 aaKnown RBP16.28■□□□□ 0.2
ATP2C2-201ENST00000262429 RIPK4P57078 832 aa16.27■□□□□ 0.2
ATP2C2-201ENST00000262429 NGDNQ8NEJ9 315 aaKnown RBP16.27■□□□□ 0.2
ATP2C2-201ENST00000262429 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
ATP2C2-201ENST00000262429 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
ATP2C2-201ENST00000262429 ZNF142P52746 1687 aaPredicted RBP16.26■□□□□ 0.19
ATP2C2-201ENST00000262429 MAPK8IP3Q9UPT6 1336 aa16.26■□□□□ 0.19
ATP2C2-201ENST00000262429 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
ATP2C2-201ENST00000262429 CHD2O14647 1828 aaKnown RBP16.26■□□□□ 0.19
ATP2C2-201ENST00000262429 SSH2Q76I76 1423 aa16.26■□□□□ 0.19
ATP2C2-201ENST00000262429 CCDC27Q2M243 656 aa16.25■□□□□ 0.19
ATP2C2-201ENST00000262429 WDR63Q8IWG1 891 aa16.25■□□□□ 0.19
ATP2C2-201ENST00000262429 NALCNQ8IZF0 1738 aa16.25■□□□□ 0.19
ATP2C2-201ENST00000262429 PEAK1Q9H792 1746 aa16.25■□□□□ 0.19
ATP2C2-201ENST00000262429 OVOS2A0A0J9YW53 1432 aa16.24■□□□□ 0.19
ATP2C2-201ENST00000262429 OVOS2Q6IE36 1432 aa16.24■□□□□ 0.19
ATP2C2-201ENST00000262429 PANK1Q8TE04 598 aa16.24■□□□□ 0.19
ATP2C2-201ENST00000262429 FRAT1Q92837 279 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms