RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 BLMP54132 1417 aaPredicted RBP17.6■□□□□ 0.41
TRAF4-202ENST00000262396 GLI3P10071 1580 aa17.6■□□□□ 0.41
TRAF4-202ENST00000262396 ZC3H6P61129 1189 aaKnown RBP17.59■□□□□ 0.41
TRAF4-202ENST00000262396 NBPF1Q3BBV0 1214 aa17.59■□□□□ 0.41
TRAF4-202ENST00000262396 ACEP12821 1306 aa17.58■□□□□ 0.4
TRAF4-202ENST00000262396 CENPJQ9HC77 1338 aaPredicted RBP17.58■□□□□ 0.4
TRAF4-202ENST00000262396 NEUROD1Q13562 356 aa17.58■□□□□ 0.4
TRAF4-202ENST00000262396 NBPF8Q3BBV2 869 aa17.58■□□□□ 0.4
TRAF4-202ENST00000262396 ABTB2Q8N961 1025 aa17.58■□□□□ 0.4
TRAF4-202ENST00000262396 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.4
TRAF4-202ENST00000262396 CHRNA2Q15822 529 aa17.57■□□□□ 0.4
TRAF4-202ENST00000262396 NWD2Q9ULI1 1742 aa17.57■□□□□ 0.4
TRAF4-202ENST00000262396 ZBTB7CA1YPR0 619 aa17.56■□□□□ 0.4
TRAF4-202ENST00000262396 ONECUT3O60422 494 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-202ENST00000262396 BAG6P46379 1132 aa17.56■□□□□ 0.4
TRAF4-202ENST00000262396 DEFB132Q7Z7B7 95 aa17.56■□□□□ 0.4
TRAF4-202ENST00000262396 ATP7BP35670 1465 aa17.56■□□□□ 0.4
TRAF4-202ENST00000262396 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
TRAF4-202ENST00000262396 USP35Q9P2H5 1018 aa17.55■□□□□ 0.4
TRAF4-202ENST00000262396 ITSN1Q15811 1721 aa17.55■□□□□ 0.4
TRAF4-202ENST00000262396 KIAA0232Q92628 1395 aa17.54■□□□□ 0.4
TRAF4-202ENST00000262396 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
TRAF4-202ENST00000262396 ABCA3Q99758 1704 aa17.54■□□□□ 0.4
TRAF4-202ENST00000262396 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
TRAF4-202ENST00000262396 SPATA31A5Q5VU36 1347 aa17.53■□□□□ 0.4
TRAF4-202ENST00000262396 SPATA31A7Q8IWB4 1347 aa17.53■□□□□ 0.4
TRAF4-202ENST00000262396 TRPM3Q9HCF6 1732 aaPredicted RBP17.53■□□□□ 0.4
TRAF4-202ENST00000262396 PLEKHG3A1L390 1219 aa17.53■□□□□ 0.4
TRAF4-202ENST00000262396 NLRP13Q86W25 1043 aa17.53■□□□□ 0.4
TRAF4-202ENST00000262396 L3MBTL2Q969R5 705 aa17.53■□□□□ 0.4
TRAF4-202ENST00000262396 ALS2Q96Q42 1657 aa17.52■□□□□ 0.39
TRAF4-202ENST00000262396 PPIP5K1Q6PFW1 1433 aa17.51■□□□□ 0.39
TRAF4-202ENST00000262396 KIAA1210Q9ULL0 1709 aa17.5■□□□□ 0.39
TRAF4-202ENST00000262396 PDE3BQ13370 1112 aa17.5■□□□□ 0.39
TRAF4-202ENST00000262396 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
TRAF4-202ENST00000262396 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
TRAF4-202ENST00000262396 POLR3AO14802 1390 aaPredicted RBP17.5■□□□□ 0.39
TRAF4-202ENST00000262396 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
TRAF4-202ENST00000262396 CABP1Q9NZU7 370 aa17.48■□□□□ 0.39
TRAF4-202ENST00000262396 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
TRAF4-202ENST00000262396 ROCK2O75116 1388 aaKnown RBP17.48■□□□□ 0.39
TRAF4-202ENST00000262396 SPATA31A1Q5TZJ5 1347 aa17.47■□□□□ 0.39
TRAF4-202ENST00000262396 NLRP6P59044 892 aa17.47■□□□□ 0.39
TRAF4-202ENST00000262396 EP400Q96L91 3159 aa17.46■□□□□ 0.39
TRAF4-202ENST00000262396 GCP02774 474 aa17.46■□□□□ 0.39
TRAF4-202ENST00000262396 EN1Q05925 392 aaPredicted RBP17.45■□□□□ 0.38
TRAF4-202ENST00000262396 FAM196AQ6ZSG2 479 aa17.45■□□□□ 0.38
TRAF4-202ENST00000262396 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
TRAF4-202ENST00000262396 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
TRAF4-202ENST00000262396 PSDA5PKW4 1024 aaPredicted RBP17.43■□□□□ 0.38
TRAF4-202ENST00000262396 LARP1Q6PKG0 1096 aaKnown RBP17.43■□□□□ 0.38
TRAF4-202ENST00000262396 TCP11L2Q8N4U5 519 aa17.43■□□□□ 0.38
TRAF4-202ENST00000262396 SOX12O15370 315 aa17.42■□□□□ 0.38
TRAF4-202ENST00000262396 TRIM37O94972 964 aa17.42■□□□□ 0.38
TRAF4-202ENST00000262396 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
TRAF4-202ENST00000262396 PHRF1Q9P1Y6 1649 aaKnown RBP17.41■□□□□ 0.38
TRAF4-202ENST00000262396 APBA3O96018 575 aa17.41■□□□□ 0.38
TRAF4-202ENST00000262396 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
TRAF4-202ENST00000262396 TOPAZ1Q8N9V7 1692 aa17.41■□□□□ 0.38
TRAF4-202ENST00000262396 QRICH2Q9H0J4 1663 aa17.4■□□□□ 0.38
TRAF4-202ENST00000262396 BARGINQ6ZT62 677 aa17.4■□□□□ 0.38
TRAF4-202ENST00000262396 THRAP3Q9Y2W1 955 aaKnown RBP17.4■□□□□ 0.38
TRAF4-202ENST00000262396 USP19O94966 1318 aa17.4■□□□□ 0.38
TRAF4-202ENST00000262396 CPDO75976 1380 aa17.4■□□□□ 0.38
TRAF4-202ENST00000262396 CSB-PGBD3P0DP91 1061 aa17.39■□□□□ 0.37
TRAF4-202ENST00000262396 TOM1L2Q6ZVM7 507 aa17.39■□□□□ 0.37
TRAF4-202ENST00000262396 CARD11Q9BXL7 1154 aa17.39■□□□□ 0.37
TRAF4-202ENST00000262396 USP6P35125 1406 aa17.38■□□□□ 0.37
TRAF4-202ENST00000262396 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
TRAF4-202ENST00000262396 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
TRAF4-202ENST00000262396 KCNH5Q8NCM2 988 aa17.37■□□□□ 0.37
TRAF4-202ENST00000262396 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
TRAF4-202ENST00000262396 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
TRAF4-202ENST00000262396 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
TRAF4-202ENST00000262396 NRKQ7Z2Y5 1582 aa17.36■□□□□ 0.37
TRAF4-202ENST00000262396 C11orf95C9JLR9 678 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-202ENST00000262396 NBPF14Q5TI25 921 aa17.35■□□□□ 0.37
TRAF4-202ENST00000262396 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
TRAF4-202ENST00000262396 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
TRAF4-202ENST00000262396 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
TRAF4-202ENST00000262396 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
TRAF4-202ENST00000262396 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.37
TRAF4-202ENST00000262396 CRB1P82279 1406 aa17.33■□□□□ 0.36
TRAF4-202ENST00000262396 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
TRAF4-202ENST00000262396 DDB1Q16531 1140 aa17.33■□□□□ 0.36
TRAF4-202ENST00000262396 HDGFL2Q7Z4V5 671 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-202ENST00000262396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.33■□□□□ 0.36
TRAF4-202ENST00000262396 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
TRAF4-202ENST00000262396 AATKQ6ZMQ8 1374 aa17.32■□□□□ 0.36
TRAF4-202ENST00000262396 COL5A2P05997 1499 aaPredicted RBP17.31■□□□□ 0.36
TRAF4-202ENST00000262396 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
TRAF4-202ENST00000262396 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
TRAF4-202ENST00000262396 CAMKK2Q96RR4 588 aa17.29■□□□□ 0.36
TRAF4-202ENST00000262396 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
TRAF4-202ENST00000262396 CDCA7Q9BWT1 371 aaPredicted RBP17.28■□□□□ 0.36
TRAF4-202ENST00000262396 DISP2A7MBM2 1401 aa17.28■□□□□ 0.36
TRAF4-202ENST00000262396 ARHGEF25Q86VW2 580 aa17.27■□□□□ 0.36
TRAF4-202ENST00000262396 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
TRAF4-202ENST00000262396 OVOS2A0A0G2JMS6 1433 aa17.26■□□□□ 0.35
TRAF4-202ENST00000262396 OVOS2A0A0J9YW53 1432 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms