RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 NXF1Q9UBU9 619 aaKnown RBP7.23□□□□□ -1.25
CDRT1-201ENST00000261644 SPTLC1O15269 473 aa7.22□□□□□ -1.25
CDRT1-201ENST00000261644 SLC16A10Q8TF71 515 aa7.22□□□□□ -1.25
CDRT1-201ENST00000261644 BEGAINQ9BUH8 593 aa7.22□□□□□ -1.25
CDRT1-201ENST00000261644 F12P00748 615 aaPredicted RBP7.21□□□□□ -1.26
CDRT1-201ENST00000261644 TUSC1Q2TAM9 212 aa7.21□□□□□ -1.26
CDRT1-201ENST00000261644 PARP9Q8IXQ6 854 aa7.21□□□□□ -1.26
CDRT1-201ENST00000261644 BAP1Q92560 729 aa7.21□□□□□ -1.26
CDRT1-201ENST00000261644 TBC1D2Q9BYX2 928 aa7.21□□□□□ -1.26
CDRT1-201ENST00000261644 CDK15Q96Q40 435 aa7.2□□□□□ -1.26
CDRT1-201ENST00000261644 BMP1P13497 986 aa7.19□□□□□ -1.26
CDRT1-201ENST00000261644 LINC01559Q495D7 138 aa7.19□□□□□ -1.26
CDRT1-201ENST00000261644 KLF16Q9BXK1 252 aaPredicted RBP7.19□□□□□ -1.26
CDRT1-201ENST00000261644 ZBTB3Q9H5J0 574 aa7.19□□□□□ -1.26
CDRT1-201ENST00000261644 TLL2Q9Y6L7 1015 aa7.19□□□□□ -1.26
CDRT1-201ENST00000261644 H3BM21 787 aa7.18□□□□□ -1.26
CDRT1-201ENST00000261644 TRIM66O15016 1216 aa7.18□□□□□ -1.26
CDRT1-201ENST00000261644 ADH1CP00326 375 aa7.18□□□□□ -1.26
CDRT1-201ENST00000261644 NNTQ13423 1086 aa7.18□□□□□ -1.26
CDRT1-201ENST00000261644 FAM174AQ8TBP5 190 aa7.18□□□□□ -1.26
CDRT1-201ENST00000261644 IRF7Q92985 503 aa7.18□□□□□ -1.26
CDRT1-201ENST00000261644 CFAP99D6REC4 459 aa7.17□□□□□ -1.26
CDRT1-201ENST00000261644 TIMP2P16035 220 aa7.17□□□□□ -1.26
CDRT1-201ENST00000261644 HRCP23327 699 aa7.17□□□□□ -1.26
CDRT1-201ENST00000261644 MRPL14Q6P1L8 145 aaKnown RBP7.16□□□□□ -1.26
CDRT1-201ENST00000261644 AK7Q96M32 723 aa7.16□□□□□ -1.26
CDRT1-201ENST00000261644 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
CDRT1-201ENST00000261644 PCDHB15Q9Y5E8 787 aa7.16□□□□□ -1.26
CDRT1-201ENST00000261644 FAM181BA6NEQ2 426 aa7.15□□□□□ -1.26
CDRT1-201ENST00000261644 VSIG8P0DPA2 414 aa7.15□□□□□ -1.26
CDRT1-201ENST00000261644 NR5A1Q13285 461 aa7.15□□□□□ -1.26
CDRT1-201ENST00000261644 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
CDRT1-201ENST00000261644 SCARF1Q14162 830 aa7.14□□□□□ -1.27
CDRT1-201ENST00000261644 RIC3Q7Z5B4 369 aa7.14□□□□□ -1.27
CDRT1-201ENST00000261644 CTHP32929 405 aa7.13□□□□□ -1.27
CDRT1-201ENST00000261644 GMPRP36959 345 aa7.13□□□□□ -1.27
CDRT1-201ENST00000261644 WDR4P57081 412 aaKnown RBP7.13□□□□□ -1.27
CDRT1-201ENST00000261644 BPHLQ86WA6 291 aaPredicted RBP7.13□□□□□ -1.27
CDRT1-201ENST00000261644 ARMC2Q8NEN0 867 aa7.13□□□□□ -1.27
CDRT1-201ENST00000261644 C1QTNF2Q9BXJ5 285 aa7.13□□□□□ -1.27
CDRT1-201ENST00000261644 MAP10Q9P2G4 905 aa7.13□□□□□ -1.27
CDRT1-201ENST00000261644 MAP4K5Q9Y4K4 846 aa7.13□□□□□ -1.27
CDRT1-201ENST00000261644 SH3RF1Q7Z6J0 888 aa7.12□□□□□ -1.27
CDRT1-201ENST00000261644 LILRB3O75022 631 aa7.11□□□□□ -1.27
CDRT1-201ENST00000261644 TRMT44Q8IYL2 757 aaKnown RBP7.11□□□□□ -1.27
CDRT1-201ENST00000261644 ZSCAN1Q8NBB4 408 aa7.11□□□□□ -1.27
CDRT1-201ENST00000261644 FOXJ1Q92949 421 aa7.11□□□□□ -1.27
CDRT1-201ENST00000261644 GRM5P41594 1212 aa7.1□□□□□ -1.27
CDRT1-201ENST00000261644 C4orf48Q5BLP8 95 aa7.1□□□□□ -1.27
CDRT1-201ENST00000261644 NBPF14Q5TI25 921 aa7.1□□□□□ -1.27
CDRT1-201ENST00000261644 MYSM1Q5VVJ2 828 aa7.1□□□□□ -1.27
CDRT1-201ENST00000261644 GPKOWQ92917 476 aaPredicted RBP eCLIP7.1□□□□□ -1.27
CDRT1-201ENST00000261644 ERBB4Q15303 1308 aa7.09□□□□□ -1.27
CDRT1-201ENST00000261644 PER1O15534 1290 aaPredicted RBP7.09□□□□□ -1.27
CDRT1-201ENST00000261644 CABLES1Q8TDN4 633 aa7.09□□□□□ -1.27
CDRT1-201ENST00000261644 PURBQ96QR8 312 aaKnown RBP7.09□□□□□ -1.27
CDRT1-201ENST00000261644 LIMD1Q9UGP4 676 aa7.09□□□□□ -1.27
CDRT1-201ENST00000261644 ZIC2O95409 532 aaPredicted RBP7.08□□□□□ -1.28
CDRT1-201ENST00000261644 NR3C2P08235 984 aa7.08□□□□□ -1.28
CDRT1-201ENST00000261644 PDE4DQ08499 809 aa7.08□□□□□ -1.28
CDRT1-201ENST00000261644 SH3BP5LQ7L8J4 393 aa7.08□□□□□ -1.28
CDRT1-201ENST00000261644 MEIOBQ8N635 442 aa7.08□□□□□ -1.28
CDRT1-201ENST00000261644 ITPKCQ96DU7 683 aa7.08□□□□□ -1.28
CDRT1-201ENST00000261644 QPCTQ16769 361 aa7.07□□□□□ -1.28
CDRT1-201ENST00000261644 HELBQ8NG08 1087 aaPredicted RBP7.07□□□□□ -1.28
CDRT1-201ENST00000261644 ZFAND3Q9H8U3 227 aa7.06□□□□□ -1.28
CDRT1-201ENST00000261644 LINC00528Q8N1L1 170 aa7.05□□□□□ -1.28
CDRT1-201ENST00000261644 RSPH6AQ9H0K4 717 aa7.05□□□□□ -1.28
CDRT1-201ENST00000261644 UPP2O95045 317 aa7.04□□□□□ -1.28
CDRT1-201ENST00000261644 CLK2P49760 499 aaKnown RBP7.04□□□□□ -1.28
CDRT1-201ENST00000261644 VEGFBP49765 207 aa7.04□□□□□ -1.28
CDRT1-201ENST00000261644 ARID5BQ14865 1188 aa7.04□□□□□ -1.28
CDRT1-201ENST00000261644 AGERQ15109 404 aa7.04□□□□□ -1.28
CDRT1-201ENST00000261644 EMILIN1Q9Y6C2 1016 aa7.04□□□□□ -1.28
CDRT1-201ENST00000261644 SOS2Q07890 1332 aaPredicted RBP7.03□□□□□ -1.28
CDRT1-201ENST00000261644 NUTM2BA6NNL0 878 aaPredicted RBP7.03□□□□□ -1.28
CDRT1-201ENST00000261644 NUTM2EB1AL46 878 aaPredicted RBP7.03□□□□□ -1.28
CDRT1-201ENST00000261644 MAN1A2O60476 641 aa7.03□□□□□ -1.28
CDRT1-201ENST00000261644 NUTM2DQ5VT03 806 aaPredicted RBP7.03□□□□□ -1.28
CDRT1-201ENST00000261644 NUTM2AQ8IVF1 878 aaPredicted RBP7.03□□□□□ -1.28
CDRT1-201ENST00000261644 ZC3H4Q9UPT8 1303 aaKnown RBP7.02□□□□□ -1.28
CDRT1-201ENST00000261644 FSHRP23945 695 aa7.02□□□□□ -1.29
CDRT1-201ENST00000261644 CSPP1Q1MSJ5 1256 aa7.02□□□□□ -1.29
CDRT1-201ENST00000261644 TSEN34Q9BSV6 310 aaKnown RBP7.02□□□□□ -1.29
CDRT1-201ENST00000261644 CDV3Q9UKY7 258 aaKnown RBP7.02□□□□□ -1.29
CDRT1-201ENST00000261644 RTL5Q5HYW3 569 aaPredicted RBP7.01□□□□□ -1.29
CDRT1-201ENST00000261644 PDXDC2PQ6P474 469 aa7.01□□□□□ -1.29
CDRT1-201ENST00000261644 VASH1Q7L8A9 365 aaPredicted RBP7.01□□□□□ -1.29
CDRT1-201ENST00000261644 CCDC116Q8IYX3 515 aa7.01□□□□□ -1.29
CDRT1-201ENST00000261644 SOBPA7XYQ1 873 aa7□□□□□ -1.29
CDRT1-201ENST00000261644 PPFIA3O75145 1194 aa7□□□□□ -1.29
CDRT1-201ENST00000261644 BMP2P12643 396 aa7□□□□□ -1.29
CDRT1-201ENST00000261644 ERFEQ4G0M1 354 aa7□□□□□ -1.29
CDRT1-201ENST00000261644 Q6ZVU0 165 aa7□□□□□ -1.29
CDRT1-201ENST00000261644 C6orf118Q5T5N4 469 aa6.99□□□□□ -1.29
CDRT1-201ENST00000261644 TSC1Q92574 1164 aa6.99□□□□□ -1.29
CDRT1-201ENST00000261644 DNMT3LQ9UJW3 386 aa6.99□□□□□ -1.29
CDRT1-201ENST00000261644 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.98□□□□□ -1.29
CDRT1-201ENST00000261644 PPP2R2DQ66LE6 453 aa6.98□□□□□ -1.29
CDRT1-201ENST00000261644 GPSM3Q9Y4H4 160 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms