RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 TMEM57Q8N5G2 664 aa20.73■□□□□ 0.91
KLF3-201ENST00000261438 COG3Q96JB2 828 aa20.73■□□□□ 0.91
KLF3-201ENST00000261438 RUFY1Q96T51 708 aa20.73■□□□□ 0.91
KLF3-201ENST00000261438 SCAPERQ9BY12 1400 aa20.73■□□□□ 0.91
KLF3-201ENST00000261438 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
KLF3-201ENST00000261438 HOOK1Q9UJC3 728 aaKnown RBP20.72■□□□□ 0.91
KLF3-201ENST00000261438 KRT85P78386 507 aa20.72■□□□□ 0.91
KLF3-201ENST00000261438 ZKSCAN5Q9Y2L8 839 aa20.72■□□□□ 0.91
KLF3-201ENST00000261438 PSMA5P28066 241 aa20.72■□□□□ 0.91
KLF3-201ENST00000261438 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
KLF3-201ENST00000261438 CPLX1O14810 134 aa20.71■□□□□ 0.91
KLF3-201ENST00000261438 CNTROBQ8N137 903 aa20.71■□□□□ 0.91
KLF3-201ENST00000261438 NUP62CLQ9H1M0 184 aa20.71■□□□□ 0.91
KLF3-201ENST00000261438 HSP90AB4PQ58FF6 505 aa20.71■□□□□ 0.91
KLF3-201ENST00000261438 CCDC183Q5T5S1 534 aa20.71■□□□□ 0.91
KLF3-201ENST00000261438 EHBP1L1Q8N3D4 1523 aa20.7■□□□□ 0.9
KLF3-201ENST00000261438 NECTIN2Q92692 538 aa20.7■□□□□ 0.9
KLF3-201ENST00000261438 CCDC94Q9BW85 323 aaPredicted RBP20.7■□□□□ 0.9
KLF3-201ENST00000261438 TWISTNBQ3B726 338 aaPredicted RBP20.7■□□□□ 0.9
KLF3-201ENST00000261438 CPLX2Q6PUV4 134 aaKnown RBP20.7■□□□□ 0.9
KLF3-201ENST00000261438 RDXP35241 583 aaKnown RBP20.7■□□□□ 0.9
KLF3-201ENST00000261438 SMAP1Q8IYB5 467 aaPredicted RBP20.7■□□□□ 0.9
KLF3-201ENST00000261438 RBM27Q9P2N5 1060 aaKnown RBP20.7■□□□□ 0.9
KLF3-201ENST00000261438 AMPHP49418 695 aa20.7■□□□□ 0.9
KLF3-201ENST00000261438 SYNE3Q6ZMZ3 975 aa20.7■□□□□ 0.9
KLF3-201ENST00000261438 MINK1Q8N4C8 1332 aaPredicted RBP20.7■□□□□ 0.9
KLF3-201ENST00000261438 GTPBP4Q9BZE4 634 aaKnown RBP20.69■□□□□ 0.9
KLF3-201ENST00000261438 FILIP1Q7Z7B0 1213 aa20.69■□□□□ 0.9
KLF3-201ENST00000261438 DHX8Q14562 1220 aaKnown RBP20.69■□□□□ 0.9
KLF3-201ENST00000261438 HS1BP3Q53T59 392 aa20.69■□□□□ 0.9
KLF3-201ENST00000261438 ANKRD20A12PQ8NF67 263 aa20.69■□□□□ 0.9
KLF3-201ENST00000261438 TRERF1Q96PN7 1200 aa20.69■□□□□ 0.9
KLF3-201ENST00000261438 OLFM4Q6UX06 510 aa20.68■□□□□ 0.9
KLF3-201ENST00000261438 CCDC9Q9Y3X0 531 aaKnown RBP20.68■□□□□ 0.9
KLF3-201ENST00000261438 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
KLF3-201ENST00000261438 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
KLF3-201ENST00000261438 C9orf78Q9NZ63 289 aaPredicted RBP20.68■□□□□ 0.9
KLF3-201ENST00000261438 PTPN14Q15678 1187 aa20.68■□□□□ 0.9
KLF3-201ENST00000261438 PATL2C9JE40 543 aaKnown RBP20.67■□□□□ 0.9
KLF3-201ENST00000261438 UBXN4Q92575 508 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 ADCY5O95622 1261 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 TNNT1P13805 278 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 LRSAM1Q6UWE0 723 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 JPH4Q96JJ6 628 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 DEF6Q9H4E7 631 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 EFCAB5A4FU69 1503 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 TRIM29Q14134 588 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 MAP3K11Q16584 847 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 TMCO3Q6UWJ1 677 aa20.67■□□□□ 0.9
KLF3-201ENST00000261438 CALRP27797 417 aaKnown RBP20.66■□□□□ 0.9
KLF3-201ENST00000261438 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
KLF3-201ENST00000261438 SKIDA1Q1XH10 827 aa20.65■□□□□ 0.9
KLF3-201ENST00000261438 NOLC1Q14978 699 aaKnown RBP eCLIP20.65■□□□□ 0.94e-7■□□□□ 11
KLF3-201ENST00000261438 C16orf45Q96MC5 204 aaPredicted RBP20.65■□□□□ 0.9
KLF3-201ENST00000261438 GNAI3P08754 354 aa20.65■□□□□ 0.9
KLF3-201ENST00000261438 LARP1BQ659C4 914 aaKnown RBP20.65■□□□□ 0.9
KLF3-201ENST00000261438 PRKAR2BP31323 418 aa20.65■□□□□ 0.9
KLF3-201ENST00000261438 TOP2BQ02880 1626 aa20.64■□□□□ 0.9
KLF3-201ENST00000261438 KIF2AO00139 706 aaPredicted RBP20.64■□□□□ 0.9
KLF3-201ENST00000261438 CEBPZQ03701 1054 aaKnown RBP20.64■□□□□ 0.9
KLF3-201ENST00000261438 UBTFL1P0CB47 393 aaPredicted RBP20.64■□□□□ 0.89
KLF3-201ENST00000261438 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.89
KLF3-201ENST00000261438 TIGD1Q96MW7 591 aa20.64■□□□□ 0.89
KLF3-201ENST00000261438 CFAP70Q5T0N1 1121 aa20.64■□□□□ 0.89
KLF3-201ENST00000261438 UVSSAQ2YD98 709 aa20.64■□□□□ 0.89
KLF3-201ENST00000261438 KIF18AQ8NI77 898 aa20.64■□□□□ 0.89
KLF3-201ENST00000261438 TSPYL4Q9UJ04 414 aa20.64■□□□□ 0.89
KLF3-201ENST00000261438 CYP46A1Q9Y6A2 500 aa20.64■□□□□ 0.89
KLF3-201ENST00000261438 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
KLF3-201ENST00000261438 EIF3JO75822 258 aaKnown RBP20.63■□□□□ 0.89
KLF3-201ENST00000261438 SEC24BO95487 1268 aa20.63■□□□□ 0.89
KLF3-201ENST00000261438 G3BP1Q13283 466 aaKnown RBP eCLIP20.63■□□□□ 0.89
KLF3-201ENST00000261438 SURF6O75683 361 aaKnown RBP20.63■□□□□ 0.89
KLF3-201ENST00000261438 DAPK1P53355 1430 aa20.63■□□□□ 0.89
KLF3-201ENST00000261438 BMP2KLQ5H9B9 411 aa20.62■□□□□ 0.89
KLF3-201ENST00000261438 SPATA32Q96LK8 384 aa20.62■□□□□ 0.89
KLF3-201ENST00000261438 RNF123Q5XPI4 1314 aa20.62■□□□□ 0.89
KLF3-201ENST00000261438 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
KLF3-201ENST00000261438 TAF7LQ5H9L4 462 aa20.62■□□□□ 0.89
KLF3-201ENST00000261438 SSH1Q8WYL5 1049 aa20.62■□□□□ 0.89
KLF3-201ENST00000261438 LTV1Q96GA3 475 aaPredicted RBP20.62■□□□□ 0.89
KLF3-201ENST00000261438 ERLIN1O75477 346 aa20.61■□□□□ 0.89
KLF3-201ENST00000261438 TTLL5Q6EMB2 1281 aa20.61■□□□□ 0.89
KLF3-201ENST00000261438 FAM177A1Q8N128 213 aaPredicted RBP20.61■□□□□ 0.89
KLF3-201ENST00000261438 SLC12A5Q9H2X9 1139 aa20.61■□□□□ 0.89
KLF3-201ENST00000261438 SNX21Q969T3 373 aa20.61■□□□□ 0.89
KLF3-201ENST00000261438 PCMTD1Q96MG8 357 aaPredicted RBP20.61■□□□□ 0.89
KLF3-201ENST00000261438 AXDND1Q5T1B0 1012 aaPredicted RBP20.61■□□□□ 0.89
KLF3-201ENST00000261438 TBC1D9Q6ZT07 1266 aa20.61■□□□□ 0.89
KLF3-201ENST00000261438 ZNF830Q96NB3 372 aaPredicted RBP20.61■□□□□ 0.89
KLF3-201ENST00000261438 RPRD2Q5VT52 1461 aaKnown RBP20.61■□□□□ 0.89
KLF3-201ENST00000261438 GNAI2P04899 355 aa20.6■□□□□ 0.89
KLF3-201ENST00000261438 LRRCC1Q9C099 1032 aa20.6■□□□□ 0.89
KLF3-201ENST00000261438 CAMK4Q16566 473 aa20.6■□□□□ 0.89
KLF3-201ENST00000261438 CABP2Q9NPB3 220 aa20.6■□□□□ 0.89
KLF3-201ENST00000261438 ZNF396Q96N95 335 aaPredicted RBP20.6■□□□□ 0.89
KLF3-201ENST00000261438 GTF2F1P35269 517 aaKnown RBP eCLIP20.6■□□□□ 0.89
KLF3-201ENST00000261438 ZNF428Q96B54 188 aa20.6■□□□□ 0.89
KLF3-201ENST00000261438 RAB3GAP1Q15042 981 aa20.59■□□□□ 0.89
KLF3-201ENST00000261438 PCDHB15Q9Y5E8 787 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms