RNA–Protein interactions for RNA: ENST00000261303.12

PSMC1-201, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC1, Length 4,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-201ENST00000261303 TPM4P67936 248 aa17.16■□□□□ 0.34
PSMC1-201ENST00000261303 C14orf93Q9H972 538 aaKnown RBP17.16■□□□□ 0.34
PSMC1-201ENST00000261303 GNAI2P04899 355 aa17.16■□□□□ 0.34
PSMC1-201ENST00000261303 TMX4Q9H1E5 349 aaPredicted RBP17.16■□□□□ 0.34
PSMC1-201ENST00000261303 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
PSMC1-201ENST00000261303 TCOF1Q13428 1488 aaKnown RBP17.16■□□□□ 0.34
PSMC1-201ENST00000261303 PLCH2O75038 1416 aa17.16■□□□□ 0.34
PSMC1-201ENST00000261303 FBXO31Q5XUX0 539 aaPredicted RBP17.15■□□□□ 0.34
PSMC1-201ENST00000261303 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
PSMC1-201ENST00000261303 NOS1P29475 1434 aa17.15■□□□□ 0.34
PSMC1-201ENST00000261303 CPLX2Q6PUV4 134 aaKnown RBP17.14■□□□□ 0.34
PSMC1-201ENST00000261303 POGZQ7Z3K3 1410 aa17.14■□□□□ 0.34
PSMC1-201ENST00000261303 ANKLE2Q86XL3 938 aa17.14■□□□□ 0.34
PSMC1-201ENST00000261303 FAM135AQ9P2D6 1515 aa17.14■□□□□ 0.33
PSMC1-201ENST00000261303 CCT4P50991 539 aaKnown RBP17.14■□□□□ 0.33
PSMC1-201ENST00000261303 CTTNBP2Q8WZ74 1663 aa17.14■□□□□ 0.33
PSMC1-201ENST00000261303 RARSP54136 660 aaKnown RBP17.13■□□□□ 0.33
PSMC1-201ENST00000261303 DENND4BO75064 1496 aaPredicted RBP17.13■□□□□ 0.33
PSMC1-201ENST00000261303 C20orf194Q5TEA3 1177 aa17.12■□□□□ 0.33
PSMC1-201ENST00000261303 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
PSMC1-201ENST00000261303 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
PSMC1-201ENST00000261303 ABCC11Q96J66 1382 aa17.12■□□□□ 0.33
PSMC1-201ENST00000261303 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
PSMC1-201ENST00000261303 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
PSMC1-201ENST00000261303 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
PSMC1-201ENST00000261303 KDM5BQ9UGL1 1544 aa17.1■□□□□ 0.33
PSMC1-201ENST00000261303 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
PSMC1-201ENST00000261303 CNTROBQ8N137 903 aa17.1■□□□□ 0.33
PSMC1-201ENST00000261303 CHD1LQ86WJ1 897 aa17.1■□□□□ 0.33
PSMC1-201ENST00000261303 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
PSMC1-201ENST00000261303 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
PSMC1-201ENST00000261303 NEUROD6Q96NK8 337 aa17.1■□□□□ 0.33
PSMC1-201ENST00000261303 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
PSMC1-201ENST00000261303 NKTRP30414 1462 aaKnown RBP17.09■□□□□ 0.33
PSMC1-201ENST00000261303 WDR62O43379 1518 aa17.09■□□□□ 0.33
PSMC1-201ENST00000261303 VPS37CA5D8V6 355 aaPredicted RBP17.09■□□□□ 0.33
PSMC1-201ENST00000261303 ITSN2Q9NZM3 1697 aa17.09■□□□□ 0.33
PSMC1-201ENST00000261303 RABEP1Q15276 862 aa17.09■□□□□ 0.33
PSMC1-201ENST00000261303 NME9Q86XW9 330 aa17.09■□□□□ 0.33
PSMC1-201ENST00000261303 SRCIN1Q9C0H9 1055 aa17.09■□□□□ 0.33
PSMC1-201ENST00000261303 KIAA0556O60303 1618 aa17.08■□□□□ 0.33
PSMC1-201ENST00000261303 TATP17735 454 aaPredicted RBP17.08■□□□□ 0.33
PSMC1-201ENST00000261303 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.33
PSMC1-201ENST00000261303 CFAP43Q8NDM7 1665 aa17.08■□□□□ 0.32
PSMC1-201ENST00000261303 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
PSMC1-201ENST00000261303 APPP05067 770 aa17.08■□□□□ 0.32
PSMC1-201ENST00000261303 NEK4P51957 841 aa17.08■□□□□ 0.32
PSMC1-201ENST00000261303 CPLX1O14810 134 aa17.08■□□□□ 0.32
PSMC1-201ENST00000261303 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
PSMC1-201ENST00000261303 TRDNQ13061 729 aa17.07■□□□□ 0.32
PSMC1-201ENST00000261303 DUOX2Q9NRD8 1548 aa17.07■□□□□ 0.32
PSMC1-201ENST00000261303 RASSF8Q8NHQ8 419 aa17.07■□□□□ 0.32
PSMC1-201ENST00000261303 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
PSMC1-201ENST00000261303 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
PSMC1-201ENST00000261303 SYCP2Q9BX26 1530 aa17.07■□□□□ 0.32
PSMC1-201ENST00000261303 NSD2O96028 1365 aa17.06■□□□□ 0.32
PSMC1-201ENST00000261303 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
PSMC1-201ENST00000261303 G3V3G9 751 aa17.06■□□□□ 0.32
PSMC1-201ENST00000261303 AKAP17AQ02040 695 aaKnown RBP17.06■□□□□ 0.32
PSMC1-201ENST00000261303 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
PSMC1-201ENST00000261303 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
PSMC1-201ENST00000261303 NUP160Q12769 1436 aa17.06■□□□□ 0.32
PSMC1-201ENST00000261303 MCM2P49736 904 aa17.05■□□□□ 0.32
PSMC1-201ENST00000261303 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
PSMC1-201ENST00000261303 BECN2A8MW95 431 aa17.05■□□□□ 0.32
PSMC1-201ENST00000261303 ALDH1L2Q3SY69 923 aa17.05■□□□□ 0.32
PSMC1-201ENST00000261303 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
PSMC1-201ENST00000261303 GOLGA6L19H0YKK7 550 aa17.05■□□□□ 0.32
PSMC1-201ENST00000261303 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
PSMC1-201ENST00000261303 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
PSMC1-201ENST00000261303 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
PSMC1-201ENST00000261303 TESK2Q96S53 571 aa17.03■□□□□ 0.32
PSMC1-201ENST00000261303 DCTN1Q14203 1278 aa17.03■□□□□ 0.32
PSMC1-201ENST00000261303 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
PSMC1-201ENST00000261303 TRAK2O60296 914 aa17.02■□□□□ 0.32
PSMC1-201ENST00000261303 MCM10Q7L590 875 aa17.02■□□□□ 0.32
PSMC1-201ENST00000261303 BICD2Q8TD16 824 aa17.02■□□□□ 0.32
PSMC1-201ENST00000261303 PSMA5P28066 241 aa17.02■□□□□ 0.31
PSMC1-201ENST00000261303 ASXL2Q76L83 1435 aa17.02■□□□□ 0.31
PSMC1-201ENST00000261303 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
PSMC1-201ENST00000261303 TRIM29Q14134 588 aa17.01■□□□□ 0.31
PSMC1-201ENST00000261303 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.01■□□□□ 0.31
PSMC1-201ENST00000261303 AMOTL2Q9Y2J4 779 aa17.01■□□□□ 0.31
PSMC1-201ENST00000261303 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
PSMC1-201ENST00000261303 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
PSMC1-201ENST00000261303 RALYLQ86SE5 291 aaKnown RBP17.01■□□□□ 0.31
PSMC1-201ENST00000261303 VPS37DQ86XT2 251 aa17.01■□□□□ 0.31
PSMC1-201ENST00000261303 HIP1O00291 1037 aa17■□□□□ 0.31
PSMC1-201ENST00000261303 A2MP01023 1474 aa17■□□□□ 0.31
PSMC1-201ENST00000261303 PARD3Q8TEW0 1356 aa17■□□□□ 0.31
PSMC1-201ENST00000261303 SPG7Q9UQ90 795 aa17■□□□□ 0.31
PSMC1-201ENST00000261303 SKAP1Q86WV1 359 aa17■□□□□ 0.31
PSMC1-201ENST00000261303 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
PSMC1-201ENST00000261303 SRGAP3O43295 1099 aa16.99■□□□□ 0.31
PSMC1-201ENST00000261303 MRE11P49959 708 aa16.99■□□□□ 0.31
PSMC1-201ENST00000261303 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
PSMC1-201ENST00000261303 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.99■□□□□ 0.31
PSMC1-201ENST00000261303 XPCQ01831 940 aaPredicted RBP16.98■□□□□ 0.31
PSMC1-201ENST00000261303 TRIM27P14373 513 aa16.98■□□□□ 0.31
PSMC1-201ENST00000261303 CABP4P57796 275 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms