RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 L3MBTL2Q969R5 705 aa13.32□□□□□ -0.28
LIN7A-201ENST00000261203 CDK19Q9BWU1 502 aa13.32□□□□□ -0.28
LIN7A-201ENST00000261203 CRYBG1Q9Y4K1 1723 aa13.32□□□□□ -0.28
LIN7A-201ENST00000261203 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
LIN7A-201ENST00000261203 GLI3P10071 1580 aa13.31□□□□□ -0.28
LIN7A-201ENST00000261203 CENPJQ9HC77 1338 aaPredicted RBP13.31□□□□□ -0.28
LIN7A-201ENST00000261203 EP400Q96L91 3159 aa13.3□□□□□ -0.28
LIN7A-201ENST00000261203 RALGAPBQ86X10 1494 aa13.3□□□□□ -0.28
LIN7A-201ENST00000261203 COL14A1Q05707 1796 aaKnown RBP13.3□□□□□ -0.28
LIN7A-201ENST00000261203 SIN3AQ96ST3 1273 aa13.3□□□□□ -0.28
LIN7A-201ENST00000261203 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
LIN7A-201ENST00000261203 POLR3AO14802 1390 aaPredicted RBP13.3□□□□□ -0.28
LIN7A-201ENST00000261203 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
LIN7A-201ENST00000261203 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
LIN7A-201ENST00000261203 NRAPQ86VF7 1730 aa13.29□□□□□ -0.28
LIN7A-201ENST00000261203 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
LIN7A-201ENST00000261203 NEUROD1Q13562 356 aa13.28□□□□□ -0.28
LIN7A-201ENST00000261203 VPS72Q15906 364 aa13.28□□□□□ -0.28
LIN7A-201ENST00000261203 PHRF1Q9P1Y6 1649 aaKnown RBP13.28□□□□□ -0.28
LIN7A-201ENST00000261203 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.28
LIN7A-201ENST00000261203 FAM83GA6ND36 823 aa13.27□□□□□ -0.29
LIN7A-201ENST00000261203 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.29
LIN7A-201ENST00000261203 ACEP12821 1306 aa13.27□□□□□ -0.29
LIN7A-201ENST00000261203 ROCK2O75116 1388 aaKnown RBP13.26□□□□□ -0.29
LIN7A-201ENST00000261203 NBPF8Q3BBV2 869 aa13.26□□□□□ -0.29
LIN7A-201ENST00000261203 PPIP5K1Q6PFW1 1433 aa13.25□□□□□ -0.29
LIN7A-201ENST00000261203 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
LIN7A-201ENST00000261203 CCDC9Q9Y3X0 531 aaKnown RBP13.25□□□□□ -0.29
LIN7A-201ENST00000261203 BTG4Q9NY30 223 aa13.24□□□□□ -0.29
LIN7A-201ENST00000261203 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
LIN7A-201ENST00000261203 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
LIN7A-201ENST00000261203 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
LIN7A-201ENST00000261203 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
LIN7A-201ENST00000261203 TRIM26Q12899 539 aaPredicted RBP13.22□□□□□ -0.29
LIN7A-201ENST00000261203 SEPT12Q8IYM1 358 aa13.22□□□□□ -0.29
LIN7A-201ENST00000261203 NRKQ7Z2Y5 1582 aa13.21□□□□□ -0.29
LIN7A-201ENST00000261203 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
LIN7A-201ENST00000261203 ABTB2Q8N961 1025 aa13.21□□□□□ -0.29
LIN7A-201ENST00000261203 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
LIN7A-201ENST00000261203 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
LIN7A-201ENST00000261203 AKAP12Q02952 1782 aa13.2□□□□□ -0.3
LIN7A-201ENST00000261203 USP19O94966 1318 aa13.19□□□□□ -0.3
LIN7A-201ENST00000261203 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
LIN7A-201ENST00000261203 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
LIN7A-201ENST00000261203 NUTM2GQ5VZR2 741 aa13.19□□□□□ -0.3
LIN7A-201ENST00000261203 NLRP13Q86W25 1043 aa13.19□□□□□ -0.3
LIN7A-201ENST00000261203 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
LIN7A-201ENST00000261203 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
LIN7A-201ENST00000261203 USP6P35125 1406 aa13.19□□□□□ -0.3
LIN7A-201ENST00000261203 BLMP54132 1417 aaPredicted RBP13.19□□□□□ -0.3
LIN7A-201ENST00000261203 SBNO2Q9Y2G9 1366 aa13.19□□□□□ -0.3
LIN7A-201ENST00000261203 A0A0G2JS52 829 aa13.18□□□□□ -0.3
LIN7A-201ENST00000261203 MYT1Q01538 1121 aa13.18□□□□□ -0.3
LIN7A-201ENST00000261203 KRT27Q7Z3Y8 459 aa13.18□□□□□ -0.3
LIN7A-201ENST00000261203 CPDO75976 1380 aa13.18□□□□□ -0.3
LIN7A-201ENST00000261203 THSD7AQ9UPZ6 1657 aa13.18□□□□□ -0.3
LIN7A-201ENST00000261203 ZC3H6P61129 1189 aaKnown RBP13.17□□□□□ -0.3
LIN7A-201ENST00000261203 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
LIN7A-201ENST00000261203 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
LIN7A-201ENST00000261203 CHRNA2Q15822 529 aa13.16□□□□□ -0.3
LIN7A-201ENST00000261203 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
LIN7A-201ENST00000261203 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
LIN7A-201ENST00000261203 CARD11Q9BXL7 1154 aa13.16□□□□□ -0.3
LIN7A-201ENST00000261203 PIK3C2AO00443 1686 aa13.15□□□□□ -0.3
LIN7A-201ENST00000261203 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
LIN7A-201ENST00000261203 GCP02774 474 aa13.15□□□□□ -0.3
LIN7A-201ENST00000261203 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
LIN7A-201ENST00000261203 SPATA31A1Q5TZJ5 1347 aa13.14□□□□□ -0.31
LIN7A-201ENST00000261203 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
LIN7A-201ENST00000261203 SLIT3O75094 1523 aa13.14□□□□□ -0.31
LIN7A-201ENST00000261203 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
LIN7A-201ENST00000261203 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
LIN7A-201ENST00000261203 RGPD1P0DJD0 1748 aa13.13□□□□□ -0.31
LIN7A-201ENST00000261203 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
LIN7A-201ENST00000261203 EVA1CP58658 441 aa13.13□□□□□ -0.31
LIN7A-201ENST00000261203 NLRP6P59044 892 aa13.13□□□□□ -0.31
LIN7A-201ENST00000261203 CPSF1Q10570 1443 aaKnown RBP13.13□□□□□ -0.31
LIN7A-201ENST00000261203 TTC21AQ8NDW8 1320 aa13.12□□□□□ -0.31
LIN7A-201ENST00000261203 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
LIN7A-201ENST00000261203 TTC21BQ7Z4L5 1316 aa13.11□□□□□ -0.31
LIN7A-201ENST00000261203 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
LIN7A-201ENST00000261203 AATKQ6ZMQ8 1374 aa13.1□□□□□ -0.31
LIN7A-201ENST00000261203 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
LIN7A-201ENST00000261203 COL18A1P39060 1754 aa13.09□□□□□ -0.31
LIN7A-201ENST00000261203 USP54Q70EL1 1684 aa13.09□□□□□ -0.31
LIN7A-201ENST00000261203 SLC24A1O60721 1099 aa13.09□□□□□ -0.31
LIN7A-201ENST00000261203 LARP1Q6PKG0 1096 aaKnown RBP13.09□□□□□ -0.31
LIN7A-201ENST00000261203 TCP11L2Q8N4U5 519 aa13.09□□□□□ -0.31
LIN7A-201ENST00000261203 KCNH5Q8NCM2 988 aa13.09□□□□□ -0.31
LIN7A-201ENST00000261203 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
LIN7A-201ENST00000261203 THRAP3Q9Y2W1 955 aaKnown RBP13.09□□□□□ -0.31
LIN7A-201ENST00000261203 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
LIN7A-201ENST00000261203 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
LIN7A-201ENST00000261203 CRB1P82279 1406 aa13.08□□□□□ -0.32
LIN7A-201ENST00000261203 BAG6P46379 1132 aa13.08□□□□□ -0.32
LIN7A-201ENST00000261203 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
LIN7A-201ENST00000261203 RGPD5Q99666 1765 aa13.07□□□□□ -0.32
LIN7A-201ENST00000261203 ABCC6O95255 1503 aa13.07□□□□□ -0.32
LIN7A-201ENST00000261203 CD163L1Q9NR16 1453 aa13.06□□□□□ -0.32
LIN7A-201ENST00000261203 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms