RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
CHRNA1-201ENST00000261007 MTHFSP49914 203 aa13.85□□□□□ -0.19
CHRNA1-201ENST00000261007 SAFB2Q14151 953 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHRNA1-201ENST00000261007 NRXN3Q9Y4C0 1643 aa13.85□□□□□ -0.19
CHRNA1-201ENST00000261007 FAM135BQ49AJ0 1406 aa13.85□□□□□ -0.19
CHRNA1-201ENST00000261007 IQSEC2Q5JU85 1478 aa13.85□□□□□ -0.19
CHRNA1-201ENST00000261007 TECPR2O15040 1411 aa13.85□□□□□ -0.19
CHRNA1-201ENST00000261007 CCDC27Q2M243 656 aa13.84□□□□□ -0.19
CHRNA1-201ENST00000261007 L1TD1Q5T7N2 865 aaKnown RBP13.84□□□□□ -0.19
CHRNA1-201ENST00000261007 CDK19Q9BWU1 502 aa13.84□□□□□ -0.19
CHRNA1-201ENST00000261007 NLRP1Q9C000 1473 aa13.84□□□□□ -0.19
CHRNA1-201ENST00000261007 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
CHRNA1-201ENST00000261007 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
CHRNA1-201ENST00000261007 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
CHRNA1-201ENST00000261007 CPS1P31327 1500 aa13.82□□□□□ -0.2
CHRNA1-201ENST00000261007 WDR63Q8IWG1 891 aa13.82□□□□□ -0.2
CHRNA1-201ENST00000261007 BECN1Q14457 450 aa13.82□□□□□ -0.2
CHRNA1-201ENST00000261007 PNNQ9H307 717 aaKnown RBP13.82□□□□□ -0.2
CHRNA1-201ENST00000261007 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
CHRNA1-201ENST00000261007 TNNT2P45379 298 aaPredicted RBP13.81□□□□□ -0.2
CHRNA1-201ENST00000261007 WWC1Q8IX03 1113 aa13.81□□□□□ -0.2
CHRNA1-201ENST00000261007 ADGRB2O60241 1585 aa13.81□□□□□ -0.2
CHRNA1-201ENST00000261007 USP19O94966 1318 aa13.79□□□□□ -0.2
CHRNA1-201ENST00000261007 FYB1O15117 783 aa13.79□□□□□ -0.2
CHRNA1-201ENST00000261007 MAPK8IP3Q9UPT6 1336 aa13.78□□□□□ -0.2
CHRNA1-201ENST00000261007 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
CHRNA1-201ENST00000261007 TCP11L2Q8N4U5 519 aa13.78□□□□□ -0.2
CHRNA1-201ENST00000261007 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
CHRNA1-201ENST00000261007 RGS3P49796 1198 aa13.78□□□□□ -0.2
CHRNA1-201ENST00000261007 EDC4Q6P2E9 1401 aaKnown RBP13.78□□□□□ -0.2
CHRNA1-201ENST00000261007 PLEKHG1Q9ULL1 1385 aa13.77□□□□□ -0.2
CHRNA1-201ENST00000261007 U2AF1L5P0DN76 240 aaPredicted RBP13.77□□□□□ -0.21
CHRNA1-201ENST00000261007 U2AF1Q01081 240 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHRNA1-201ENST00000261007 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
CHRNA1-201ENST00000261007 CABP1Q9NZU7 370 aa13.77□□□□□ -0.21
CHRNA1-201ENST00000261007 METP08581 1390 aa13.77□□□□□ -0.21
CHRNA1-201ENST00000261007 PNPLA6Q8IY17 1366 aa13.77□□□□□ -0.21
CHRNA1-201ENST00000261007 CDC42BPGQ6DT37 1551 aa13.77□□□□□ -0.21
CHRNA1-201ENST00000261007 MYH16Q9H6N6 1097 aa13.76□□□□□ -0.21
CHRNA1-201ENST00000261007 CPSF1Q10570 1443 aaKnown RBP13.76□□□□□ -0.21
CHRNA1-201ENST00000261007 CT47B1P0C2W7 299 aaPredicted RBP13.75□□□□□ -0.21
CHRNA1-201ENST00000261007 AAMPQ13685 434 aa13.75□□□□□ -0.21
CHRNA1-201ENST00000261007 PDE3AQ14432 1141 aa13.75□□□□□ -0.21
CHRNA1-201ENST00000261007 WAPLQ7Z5K2 1190 aa13.75□□□□□ -0.21
CHRNA1-201ENST00000261007 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
CHRNA1-201ENST00000261007 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
CHRNA1-201ENST00000261007 MON2Q7Z3U7 1717 aa13.73□□□□□ -0.21
CHRNA1-201ENST00000261007 DIAPH1O60610 1272 aaKnown RBP13.73□□□□□ -0.21
CHRNA1-201ENST00000261007 ANTXR1Q9H6X2 564 aa13.73□□□□□ -0.21
CHRNA1-201ENST00000261007 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
CHRNA1-201ENST00000261007 SLIT1O75093 1534 aa13.73□□□□□ -0.21
CHRNA1-201ENST00000261007 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
CHRNA1-201ENST00000261007 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 RRAGDQ9NQL2 400 aaPredicted RBP13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 EID1Q9Y6B2 187 aa13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 ITSN1Q15811 1721 aa13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 IL16Q14005 1332 aa13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 AATKQ6ZMQ8 1374 aa13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 DIP2AQ14689 1571 aa13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 AKAP12Q02952 1782 aa13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 ARHGAP23Q9P227 1491 aa13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 C3P01024 1663 aa13.72□□□□□ -0.21
CHRNA1-201ENST00000261007 FER1L4A9Z1Z3 1794 aa13.71□□□□□ -0.21
CHRNA1-201ENST00000261007 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.22
CHRNA1-201ENST00000261007 IGHDP01880 384 aa13.71□□□□□ -0.22
CHRNA1-201ENST00000261007 TXNDC2Q86VQ3 553 aa13.71□□□□□ -0.22
CHRNA1-201ENST00000261007 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.22
CHRNA1-201ENST00000261007 PLEKHF1Q96S99 279 aa13.71□□□□□ -0.22
CHRNA1-201ENST00000261007 FCHSD2O94868 740 aa13.7□□□□□ -0.22
CHRNA1-201ENST00000261007 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
CHRNA1-201ENST00000261007 CDK12Q9NYV4 1490 aaPredicted RBP13.69□□□□□ -0.22
CHRNA1-201ENST00000261007 NEUROD2Q15784 382 aa13.69□□□□□ -0.22
CHRNA1-201ENST00000261007 FSD2A1L4K1 749 aa13.69□□□□□ -0.22
CHRNA1-201ENST00000261007 CANXP27824 592 aaKnown RBP13.69□□□□□ -0.22
CHRNA1-201ENST00000261007 UPF2Q9HAU5 1272 aaKnown RBP13.69□□□□□ -0.22
CHRNA1-201ENST00000261007 RRP7AQ9Y3A4 280 aaKnown RBP13.69□□□□□ -0.22
CHRNA1-201ENST00000261007 CLCN1P35523 988 aa13.68□□□□□ -0.22
CHRNA1-201ENST00000261007 TMPOP42166 694 aaKnown RBP13.68□□□□□ -0.22
CHRNA1-201ENST00000261007 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
CHRNA1-201ENST00000261007 TOPAZ1Q8N9V7 1692 aa13.68□□□□□ -0.22
CHRNA1-201ENST00000261007 GOLGA6L3A6NEY3 463 aa13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 BCAR3O75815 825 aa13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 RARSP54136 660 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 SEC24BO95487 1268 aa13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 PMFBP1Q8TBY8 1022 aa13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 TBC1D32Q96NH3 1257 aa13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 TBX22Q9Y458 520 aa13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 ROBO2Q9HCK4 1378 aa13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 PTCH1Q13635 1447 aa13.67□□□□□ -0.22
CHRNA1-201ENST00000261007 MAP2P11137 1827 aaKnown RBP13.66□□□□□ -0.22
CHRNA1-201ENST00000261007 THEMISQ8N1K5 641 aaPredicted RBP13.66□□□□□ -0.22
CHRNA1-201ENST00000261007 COG3Q96JB2 828 aa13.66□□□□□ -0.22
CHRNA1-201ENST00000261007 CALD1Q05682 793 aaKnown RBP13.65□□□□□ -0.22
CHRNA1-201ENST00000261007 XRCC6P12956 609 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHRNA1-201ENST00000261007 PLEKHG3A1L390 1219 aa13.64□□□□□ -0.23
CHRNA1-201ENST00000261007 LTKP29376 864 aa13.64□□□□□ -0.23
CHRNA1-201ENST00000261007 SLKQ9H2G2 1235 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms