RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 NHSL1Q5SYE7 1610 aa21.67■■□□□ 1.06
CCDC90B-201ENST00000260054 AMER1Q5JTC6 1135 aaPredicted RBP21.66■■□□□ 1.06
CCDC90B-201ENST00000260054 TRPM3Q9HCF6 1732 aaPredicted RBP21.65■■□□□ 1.06
CCDC90B-201ENST00000260054 BRD4O60885 1362 aaPredicted RBP21.65■■□□□ 1.06
CCDC90B-201ENST00000260054 SOS2Q07890 1332 aaPredicted RBP21.64■■□□□ 1.06
CCDC90B-201ENST00000260054 CGNL1Q0VF96 1302 aa21.64■■□□□ 1.06
CCDC90B-201ENST00000260054 DIEXFQ68CQ4 756 aaKnown RBP21.64■■□□□ 1.05
CCDC90B-201ENST00000260054 AHDC1Q5TGY3 1603 aaPredicted RBP21.64■■□□□ 1.05
CCDC90B-201ENST00000260054 PAK3O75914 559 aaPredicted RBP21.63■■□□□ 1.05
CCDC90B-201ENST00000260054 FYB1O15117 783 aa21.63■■□□□ 1.05
CCDC90B-201ENST00000260054 NME9Q86XW9 330 aa21.63■■□□□ 1.05
CCDC90B-201ENST00000260054 TTC21AQ8NDW8 1320 aa21.62■■□□□ 1.05
CCDC90B-201ENST00000260054 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
CCDC90B-201ENST00000260054 SBNO1A3KN83 1393 aa21.61■■□□□ 1.05
CCDC90B-201ENST00000260054 NPC1L1Q9UHC9 1359 aa21.61■■□□□ 1.05
CCDC90B-201ENST00000260054 CC2D1BQ5T0F9 858 aaKnown RBP21.6■■□□□ 1.05
CCDC90B-201ENST00000260054 GGNBP2Q9H3C7 697 aa21.6■■□□□ 1.05
CCDC90B-201ENST00000260054 ZRANB1Q9UGI0 708 aa21.6■■□□□ 1.05
CCDC90B-201ENST00000260054 PIK3C2AO00443 1686 aa21.59■■□□□ 1.05
CCDC90B-201ENST00000260054 KIF20BQ96Q89 1820 aa21.59■■□□□ 1.05
CCDC90B-201ENST00000260054 ABTB2Q8N961 1025 aa21.59■■□□□ 1.05
CCDC90B-201ENST00000260054 SPATA31A3Q5VYP0 1347 aa21.59■■□□□ 1.05
CCDC90B-201ENST00000260054 TNS3Q68CZ2 1445 aa21.58■■□□□ 1.05
CCDC90B-201ENST00000260054 NSD2O96028 1365 aa21.58■■□□□ 1.04
CCDC90B-201ENST00000260054 ALS2Q96Q42 1657 aa21.57■■□□□ 1.04
CCDC90B-201ENST00000260054 PHLPP1O60346 1717 aa21.57■■□□□ 1.04
CCDC90B-201ENST00000260054 NUTM2GQ5VZR2 741 aa21.56■■□□□ 1.04
CCDC90B-201ENST00000260054 LMOD2Q6P5Q4 547 aa21.56■■□□□ 1.04
CCDC90B-201ENST00000260054 USP31Q70CQ4 1352 aa21.56■■□□□ 1.04
CCDC90B-201ENST00000260054 OVOS2A0A0J9YW53 1432 aa21.56■■□□□ 1.04
CCDC90B-201ENST00000260054 OVOS2Q6IE36 1432 aa21.56■■□□□ 1.04
CCDC90B-201ENST00000260054 COL16A1Q07092 1604 aaPredicted RBP21.55■■□□□ 1.04
CCDC90B-201ENST00000260054 NLRP6P59044 892 aa21.54■■□□□ 1.04
CCDC90B-201ENST00000260054 COG3Q96JB2 828 aa21.53■■□□□ 1.04
CCDC90B-201ENST00000260054 ANKRD26Q9UPS8 1709 aa21.53■■□□□ 1.04
CCDC90B-201ENST00000260054 PARD3Q8TEW0 1356 aa21.53■■□□□ 1.04
CCDC90B-201ENST00000260054 LRRC59Q96AG4 307 aaKnown RBP21.53■■□□□ 1.04
CCDC90B-201ENST00000260054 PRKRIP1Q9H875 184 aaPredicted RBP21.53■■□□□ 1.04
CCDC90B-201ENST00000260054 MARF1Q9Y4F3 1742 aaKnown RBP21.53■■□□□ 1.04
CCDC90B-201ENST00000260054 ARHGEF10O15013 1369 aa21.52■■□□□ 1.04
CCDC90B-201ENST00000260054 USP54Q70EL1 1684 aa21.52■■□□□ 1.04
CCDC90B-201ENST00000260054 MORC1Q86VD1 984 aa21.52■■□□□ 1.04
CCDC90B-201ENST00000260054 ANP32CO43423 234 aa21.51■■□□□ 1.03
CCDC90B-201ENST00000260054 NLRP13Q86W25 1043 aa21.51■■□□□ 1.03
CCDC90B-201ENST00000260054 USP19O94966 1318 aa21.48■■□□□ 1.03
CCDC90B-201ENST00000260054 PLEKHG5O94827 1062 aa21.48■■□□□ 1.03
CCDC90B-201ENST00000260054 HSPA1LP34931 641 aa21.48■■□□□ 1.03
CCDC90B-201ENST00000260054 TNNT2P45379 298 aaPredicted RBP21.48■■□□□ 1.03
CCDC90B-201ENST00000260054 RALBP1Q15311 655 aa21.48■■□□□ 1.03
CCDC90B-201ENST00000260054 MED1Q15648 1581 aaPredicted RBP21.47■■□□□ 1.03
CCDC90B-201ENST00000260054 PNPLA6Q8IY17 1366 aa21.47■■□□□ 1.03
CCDC90B-201ENST00000260054 FBLN1P23142 703 aa21.47■■□□□ 1.03
CCDC90B-201ENST00000260054 SLIT3O75094 1523 aa21.46■■□□□ 1.03
CCDC90B-201ENST00000260054 CABLES1Q8TDN4 633 aa21.46■■□□□ 1.03
CCDC90B-201ENST00000260054 SOX12O15370 315 aa21.45■■□□□ 1.02
CCDC90B-201ENST00000260054 CRYBG1Q9Y4K1 1723 aa21.45■■□□□ 1.02
CCDC90B-201ENST00000260054 FBXO41Q8TF61 875 aa21.44■■□□□ 1.02
CCDC90B-201ENST00000260054 COL22A1Q8NFW1 1626 aaPredicted RBP21.43■■□□□ 1.02
CCDC90B-201ENST00000260054 GCP02774 474 aa21.43■■□□□ 1.02
CCDC90B-201ENST00000260054 PHRF1Q9P1Y6 1649 aaKnown RBP21.42■■□□□ 1.02
CCDC90B-201ENST00000260054 AATKQ6ZMQ8 1374 aa21.42■■□□□ 1.02
CCDC90B-201ENST00000260054 NFAT5O94916 1531 aa21.42■■□□□ 1.02
CCDC90B-201ENST00000260054 PPP2R1AP30153 589 aa21.42■■□□□ 1.02
CCDC90B-201ENST00000260054 MIER1Q8N108 512 aa21.42■■□□□ 1.02
CCDC90B-201ENST00000260054 KCNH5Q8NCM2 988 aa21.41■■□□□ 1.02
CCDC90B-201ENST00000260054 MYBBP1AQ9BQG0 1328 aaKnown RBP21.41■■□□□ 1.02
CCDC90B-201ENST00000260054 ABCA3Q99758 1704 aa21.4■■□□□ 1.02
CCDC90B-201ENST00000260054 JCADQ9P266 1359 aa21.4■■□□□ 1.02
CCDC90B-201ENST00000260054 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
CCDC90B-201ENST00000260054 SHPRHQ149N8 1683 aa21.39■■□□□ 1.02
CCDC90B-201ENST00000260054 POLKQ9UBT6 870 aa21.39■■□□□ 1.01
CCDC90B-201ENST00000260054 EMILIN1Q9Y6C2 1016 aa21.37■■□□□ 1.01
CCDC90B-201ENST00000260054 MAP3K19Q56UN5 1328 aa21.37■■□□□ 1.01
CCDC90B-201ENST00000260054 MAP2P11137 1827 aaKnown RBP21.37■■□□□ 1.01
CCDC90B-201ENST00000260054 MTHFSP49914 203 aa21.36■■□□□ 1.01
CCDC90B-201ENST00000260054 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
CCDC90B-201ENST00000260054 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
CCDC90B-201ENST00000260054 SMG6Q86US8 1419 aaKnown RBP21.36■■□□□ 1.01
CCDC90B-201ENST00000260054 ARHGEF25Q86VW2 580 aa21.34■■□□□ 1.01
CCDC90B-201ENST00000260054 PPM1GO15355 546 aaPredicted RBP21.34■■□□□ 1.01
CCDC90B-201ENST00000260054 CCDC184Q52MB2 194 aa21.34■■□□□ 1.01
CCDC90B-201ENST00000260054 CPDO75976 1380 aa21.33■■□□□ 1.01
CCDC90B-201ENST00000260054 KIAA0232Q92628 1395 aa21.33■■□□□ 1.01
CCDC90B-201ENST00000260054 PEAK1Q9H792 1746 aa21.33■■□□□ 1
CCDC90B-201ENST00000260054 LTN1O94822 1766 aa21.32■■□□□ 1
CCDC90B-201ENST00000260054 ZBTB7CA1YPR0 619 aa21.32■■□□□ 1
CCDC90B-201ENST00000260054 NUTM2BA6NNL0 878 aaPredicted RBP21.31■■□□□ 1
CCDC90B-201ENST00000260054 NUTM2EB1AL46 878 aaPredicted RBP21.31■■□□□ 1
CCDC90B-201ENST00000260054 NUTM2AQ8IVF1 878 aaPredicted RBP21.31■■□□□ 1
CCDC90B-201ENST00000260054 SPATA31A6Q5VVP1 1343 aa21.31■■□□□ 1
CCDC90B-201ENST00000260054 AMPHP49418 695 aa21.31■■□□□ 1
CCDC90B-201ENST00000260054 CDK12Q9NYV4 1490 aaPredicted RBP21.3■■□□□ 1
CCDC90B-201ENST00000260054 HOXC9P31274 260 aa21.29■■□□□ 1
CCDC90B-201ENST00000260054 CHRNA2Q15822 529 aa21.29■■□□□ 1
CCDC90B-201ENST00000260054 RTL1A6NKG5 1358 aa21.29■■□□□ 1
CCDC90B-201ENST00000260054 FLT4P35916 1363 aa21.29■■□□□ 1
CCDC90B-201ENST00000260054 KIF24Q5T7B8 1368 aa21.29■■□□□ 1
CCDC90B-201ENST00000260054 HSP90AB2PQ58FF8 381 aa21.28■■□□□ 1
CCDC90B-201ENST00000260054 PRDM11Q9NQV5 511 aa21.28■■□□□ 1
CCDC90B-201ENST00000260054 CCER2I3L3R5 266 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms