RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.52
KCTD3-201ENST00000259154 FANCAO15360 1455 aa18.32■□□□□ 0.52
KCTD3-201ENST00000259154 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
KCTD3-201ENST00000259154 MADDQ8WXG6 1647 aa18.32■□□□□ 0.52
KCTD3-201ENST00000259154 RAPGEF3O95398 923 aa18.32■□□□□ 0.52
KCTD3-201ENST00000259154 SKOR2Q2VWA4 1001 aaPredicted RBP18.32■□□□□ 0.52
KCTD3-201ENST00000259154 SPHKAPQ2M3C7 1700 aa18.32■□□□□ 0.52
KCTD3-201ENST00000259154 SCAF11Q99590 1463 aaKnown RBP18.32■□□□□ 0.52
KCTD3-201ENST00000259154 ZMYM4Q5VZL5 1548 aa18.31■□□□□ 0.52
KCTD3-201ENST00000259154 FRMPD1Q5SYB0 1578 aa18.31■□□□□ 0.52
KCTD3-201ENST00000259154 TET3O43151 1660 aa18.31■□□□□ 0.52
KCTD3-201ENST00000259154 MTHFSP49914 203 aa18.31■□□□□ 0.52
KCTD3-201ENST00000259154 FGD1P98174 961 aa18.31■□□□□ 0.52
KCTD3-201ENST00000259154 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
KCTD3-201ENST00000259154 ZNF771Q7L3S4 317 aaPredicted RBP18.3■□□□□ 0.52
KCTD3-201ENST00000259154 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
KCTD3-201ENST00000259154 ZNF521Q96K83 1311 aa18.3■□□□□ 0.52
KCTD3-201ENST00000259154 UQCRHLA0A096LP55 91 aa18.3■□□□□ 0.52
KCTD3-201ENST00000259154 UQCRHP07919 91 aa18.3■□□□□ 0.52
KCTD3-201ENST00000259154 ZRSR1Q15695 479 aaKnown RBP18.3■□□□□ 0.52
KCTD3-201ENST00000259154 ST18O60284 1047 aa18.29■□□□□ 0.52
KCTD3-201ENST00000259154 IFT172Q9UG01 1749 aa18.29■□□□□ 0.52
KCTD3-201ENST00000259154 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
KCTD3-201ENST00000259154 FBLN1P23142 703 aa18.29■□□□□ 0.52
KCTD3-201ENST00000259154 NOS1P29475 1434 aa18.28■□□□□ 0.52
KCTD3-201ENST00000259154 NECTIN2Q92692 538 aa18.28■□□□□ 0.52
KCTD3-201ENST00000259154 CABP2Q9NPB3 220 aa18.28■□□□□ 0.52
KCTD3-201ENST00000259154 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
KCTD3-201ENST00000259154 RIPK4P57078 832 aa18.27■□□□□ 0.52
KCTD3-201ENST00000259154 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
KCTD3-201ENST00000259154 KDM2BQ8NHM5 1336 aa18.27■□□□□ 0.52
KCTD3-201ENST00000259154 RICTORQ6R327 1708 aa18.27■□□□□ 0.51
KCTD3-201ENST00000259154 HMOX1P09601 288 aa18.26■□□□□ 0.51
KCTD3-201ENST00000259154 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
KCTD3-201ENST00000259154 NPHP1O15259 732 aa18.26■□□□□ 0.51
KCTD3-201ENST00000259154 SSFA2P28290 1259 aa18.26■□□□□ 0.51
KCTD3-201ENST00000259154 DDX19BQ9UMR2 479 aa18.26■□□□□ 0.51
KCTD3-201ENST00000259154 TRPM2O94759 1503 aa18.26■□□□□ 0.51
KCTD3-201ENST00000259154 ASXL1Q8IXJ9 1541 aa18.26■□□□□ 0.51
KCTD3-201ENST00000259154 ERVK-7P63135 1459 aa18.25■□□□□ 0.51
KCTD3-201ENST00000259154 PPRC1Q5VV67 1664 aaKnown RBP18.25■□□□□ 0.51
KCTD3-201ENST00000259154 MCCP23508 829 aa18.25■□□□□ 0.51
KCTD3-201ENST00000259154 HDGFL2Q7Z4V5 671 aaPredicted RBP18.25■□□□□ 0.51
KCTD3-201ENST00000259154 FBXW7Q969H0 707 aa18.25■□□□□ 0.51
KCTD3-201ENST00000259154 TNPO1Q92973 898 aaKnown RBP18.25■□□□□ 0.51
KCTD3-201ENST00000259154 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
KCTD3-201ENST00000259154 PTPRTO14522 1441 aa18.24■□□□□ 0.51
KCTD3-201ENST00000259154 PCDHB15Q9Y5E8 787 aa18.24■□□□□ 0.51
KCTD3-201ENST00000259154 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
KCTD3-201ENST00000259154 GLI2P10070 1586 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 TPM2P07951 284 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 PTMSP20962 102 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 SPC24Q8NBT2 197 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 VGFO15240 615 aaPredicted RBP18.23■□□□□ 0.51
KCTD3-201ENST00000259154 IGSF3O75054 1194 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 RLBP1P12271 317 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 PDE3AQ14432 1141 aa18.23■□□□□ 0.51
KCTD3-201ENST00000259154 SYAP1Q96A49 352 aaPredicted RBP18.23■□□□□ 0.51
KCTD3-201ENST00000259154 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
KCTD3-201ENST00000259154 CBX1P83916 185 aa18.22■□□□□ 0.51
KCTD3-201ENST00000259154 CCDC27Q2M243 656 aa18.22■□□□□ 0.51
KCTD3-201ENST00000259154 ANO2Q9NQ90 1003 aa18.22■□□□□ 0.51
KCTD3-201ENST00000259154 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
KCTD3-201ENST00000259154 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
KCTD3-201ENST00000259154 ABCA6Q8N139 1617 aa18.22■□□□□ 0.51
KCTD3-201ENST00000259154 ZNF428Q96B54 188 aa18.22■□□□□ 0.51
KCTD3-201ENST00000259154 IQGAP1P46940 1657 aa18.21■□□□□ 0.51
KCTD3-201ENST00000259154 FAM177BA6PVY3 158 aa18.21■□□□□ 0.51
KCTD3-201ENST00000259154 RIMBP3CA6NJZ7 1639 aa18.21■□□□□ 0.51
KCTD3-201ENST00000259154 RIMBP3BA6NNM3 1639 aa18.21■□□□□ 0.51
KCTD3-201ENST00000259154 RIMBP3Q9UFD9 1639 aa18.21■□□□□ 0.51
KCTD3-201ENST00000259154 SYCE3A1L190 88 aa18.2■□□□□ 0.5
KCTD3-201ENST00000259154 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
KCTD3-201ENST00000259154 RBM27Q9P2N5 1060 aaKnown RBP18.2■□□□□ 0.5
KCTD3-201ENST00000259154 MYOM1P52179 1685 aa18.19■□□□□ 0.5
KCTD3-201ENST00000259154 CLCN1P35523 988 aa18.19■□□□□ 0.5
KCTD3-201ENST00000259154 ZSCAN30Q86W11 494 aa18.19■□□□□ 0.5
KCTD3-201ENST00000259154 NEK4P51957 841 aa18.19■□□□□ 0.5
KCTD3-201ENST00000259154 CCDC173Q0VFZ6 552 aa18.19■□□□□ 0.5
KCTD3-201ENST00000259154 TERF2IPQ9NYB0 399 aa18.18■□□□□ 0.5
KCTD3-201ENST00000259154 TNNT3P45378 269 aaPredicted RBP18.17■□□□□ 0.5
KCTD3-201ENST00000259154 GDPD2Q9HCC8 539 aa18.17■□□□□ 0.5
KCTD3-201ENST00000259154 CCDC9Q9Y3X0 531 aaKnown RBP18.17■□□□□ 0.5
KCTD3-201ENST00000259154 HECW2Q9P2P5 1572 aa18.17■□□□□ 0.5
KCTD3-201ENST00000259154 THUMPD2Q9BTF0 503 aaKnown RBP18.17■□□□□ 0.5
KCTD3-201ENST00000259154 MROH2AA6NES4 1674 aa18.16■□□□□ 0.5
KCTD3-201ENST00000259154 EFCAB6Q5THR3 1501 aa18.16■□□□□ 0.5
KCTD3-201ENST00000259154 TRMT2AQ8IZ69 625 aaKnown RBP18.16■□□□□ 0.5
KCTD3-201ENST00000259154 TBC1D32Q96NH3 1257 aa18.16■□□□□ 0.5
KCTD3-201ENST00000259154 MLH3Q9UHC1 1453 aa18.16■□□□□ 0.5
KCTD3-201ENST00000259154 KIAA1210Q9ULL0 1709 aa18.16■□□□□ 0.5
KCTD3-201ENST00000259154 POGZQ7Z3K3 1410 aa18.16■□□□□ 0.5
KCTD3-201ENST00000259154 ZNF830Q96NB3 372 aaPredicted RBP18.16■□□□□ 0.5
KCTD3-201ENST00000259154 SIGLEC1Q9BZZ2 1709 aa18.15■□□□□ 0.5
KCTD3-201ENST00000259154 FOSBP53539 338 aa18.15■□□□□ 0.5
KCTD3-201ENST00000259154 TMEM57Q8N5G2 664 aa18.15■□□□□ 0.5
KCTD3-201ENST00000259154 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms