RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
THSD1-201ENST00000258613 RLBP1P12271 317 aa17.03■□□□□ 0.32
THSD1-201ENST00000258613 PDE4AP27815 886 aa17.03■□□□□ 0.32
THSD1-201ENST00000258613 RGS3P49796 1198 aa17.03■□□□□ 0.32
THSD1-201ENST00000258613 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
THSD1-201ENST00000258613 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
THSD1-201ENST00000258613 SETD1AO15047 1707 aaKnown RBP17.03■□□□□ 0.32
THSD1-201ENST00000258613 PRR36Q9H6K5 1346 aa17.03■□□□□ 0.32
THSD1-201ENST00000258613 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
THSD1-201ENST00000258613 TMPOP42166 694 aaKnown RBP17.02■□□□□ 0.32
THSD1-201ENST00000258613 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.32
THSD1-201ENST00000258613 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.32
THSD1-201ENST00000258613 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.02■□□□□ 0.31
THSD1-201ENST00000258613 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.31
THSD1-201ENST00000258613 TRIM35Q9UPQ4 493 aa17.02■□□□□ 0.31
THSD1-201ENST00000258613 PPIP5K1Q6PFW1 1433 aa17.02■□□□□ 0.31
THSD1-201ENST00000258613 IGHDP01880 384 aa17.01■□□□□ 0.31
THSD1-201ENST00000258613 TMEM2Q9UHN6 1383 aa17.01■□□□□ 0.31
THSD1-201ENST00000258613 KDM2BQ8NHM5 1336 aa17.01■□□□□ 0.31
THSD1-201ENST00000258613 RIPK4P57078 832 aa17.01■□□□□ 0.31
THSD1-201ENST00000258613 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
THSD1-201ENST00000258613 PHACTR3Q96KR7 559 aa17■□□□□ 0.31
THSD1-201ENST00000258613 MAPK8IP3Q9UPT6 1336 aa17■□□□□ 0.31
THSD1-201ENST00000258613 TCERG1O14776 1098 aaKnown RBP16.99■□□□□ 0.31
THSD1-201ENST00000258613 PRKAR2BP31323 418 aa16.99■□□□□ 0.31
THSD1-201ENST00000258613 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
THSD1-201ENST00000258613 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
THSD1-201ENST00000258613 COL3A1P02461 1466 aaPredicted RBP16.99■□□□□ 0.31
THSD1-201ENST00000258613 WDR63Q8IWG1 891 aa16.98■□□□□ 0.31
THSD1-201ENST00000258613 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
THSD1-201ENST00000258613 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
THSD1-201ENST00000258613 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
THSD1-201ENST00000258613 PMFBP1Q8TBY8 1022 aa16.96■□□□□ 0.31
THSD1-201ENST00000258613 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
THSD1-201ENST00000258613 CPS1P31327 1500 aa16.96■□□□□ 0.3
THSD1-201ENST00000258613 NGEFQ8N5V2 710 aa16.95■□□□□ 0.3
THSD1-201ENST00000258613 ADAMTS13Q76LX8 1427 aa16.95■□□□□ 0.3
THSD1-201ENST00000258613 HDGFP51858 240 aaKnown RBP16.95■□□□□ 0.3
THSD1-201ENST00000258613 UBR1Q8IWV7 1749 aa16.94■□□□□ 0.3
THSD1-201ENST00000258613 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
THSD1-201ENST00000258613 CENPQQ7L2Z9 268 aaPredicted RBP16.94■□□□□ 0.3
THSD1-201ENST00000258613 DLC1Q96QB1 1528 aa16.93■□□□□ 0.3
THSD1-201ENST00000258613 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
THSD1-201ENST00000258613 ANP32AP39687 249 aaKnown RBP16.93■□□□□ 0.3
THSD1-201ENST00000258613 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
THSD1-201ENST00000258613 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
THSD1-201ENST00000258613 CPSF1Q10570 1443 aaKnown RBP16.93■□□□□ 0.3
THSD1-201ENST00000258613 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
THSD1-201ENST00000258613 COG3Q96JB2 828 aa16.92■□□□□ 0.3
THSD1-201ENST00000258613 RSPH6AQ9H0K4 717 aa16.92■□□□□ 0.3
THSD1-201ENST00000258613 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
THSD1-201ENST00000258613 PNPLA6Q8IY17 1366 aa16.92■□□□□ 0.3
THSD1-201ENST00000258613 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
THSD1-201ENST00000258613 PTPRUQ92729 1446 aa16.91■□□□□ 0.3
THSD1-201ENST00000258613 ACEP12821 1306 aa16.91■□□□□ 0.3
THSD1-201ENST00000258613 FAM83GA6ND36 823 aa16.91■□□□□ 0.3
THSD1-201ENST00000258613 DCTN1Q14203 1278 aa16.91■□□□□ 0.3
THSD1-201ENST00000258613 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
THSD1-201ENST00000258613 PDE3AQ14432 1141 aa16.91■□□□□ 0.3
THSD1-201ENST00000258613 ANKRD26Q9UPS8 1709 aa16.91■□□□□ 0.3
THSD1-201ENST00000258613 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
THSD1-201ENST00000258613 NOP58Q9Y2X3 529 aaKnown RBP16.9■□□□□ 0.3
THSD1-201ENST00000258613 ATP7BP35670 1465 aa16.9■□□□□ 0.3
THSD1-201ENST00000258613 EID1Q9Y6B2 187 aa16.89■□□□□ 0.3
THSD1-201ENST00000258613 IL13P35225 146 aa16.89■□□□□ 0.29
THSD1-201ENST00000258613 IPO9Q96P70 1041 aaKnown RBP16.89■□□□□ 0.29
THSD1-201ENST00000258613 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.89■□□□□ 0.29
THSD1-201ENST00000258613 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
THSD1-201ENST00000258613 MED14O60244 1454 aa16.89■□□□□ 0.29
THSD1-201ENST00000258613 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
THSD1-201ENST00000258613 ADGRB2O60241 1585 aa16.88■□□□□ 0.29
THSD1-201ENST00000258613 FCHSD2O94868 740 aa16.88■□□□□ 0.29
THSD1-201ENST00000258613 NBR1Q14596 966 aa16.88■□□□□ 0.29
THSD1-201ENST00000258613 LRRC7Q96NW7 1537 aa16.88■□□□□ 0.29
THSD1-201ENST00000258613 MS4A1P11836 297 aa16.87■□□□□ 0.29
THSD1-201ENST00000258613 TSPYL6Q8N831 410 aa16.86■□□□□ 0.29
THSD1-201ENST00000258613 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
THSD1-201ENST00000258613 TRIM27P14373 513 aa16.86■□□□□ 0.29
THSD1-201ENST00000258613 HSP90AB2PQ58FF8 381 aa16.86■□□□□ 0.29
THSD1-201ENST00000258613 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
THSD1-201ENST00000258613 FAM135BQ49AJ0 1406 aa16.86■□□□□ 0.29
THSD1-201ENST00000258613 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
THSD1-201ENST00000258613 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
THSD1-201ENST00000258613 FTSJ3Q8IY81 847 aaKnown RBP16.85■□□□□ 0.29
THSD1-201ENST00000258613 TECPR2O15040 1411 aa16.85■□□□□ 0.29
THSD1-201ENST00000258613 C3P01024 1663 aa16.84■□□□□ 0.29
THSD1-201ENST00000258613 ZBTB47Q9UFB7 747 aaPredicted RBP16.84■□□□□ 0.29
THSD1-201ENST00000258613 PLEKHG1Q9ULL1 1385 aa16.84■□□□□ 0.29
THSD1-201ENST00000258613 ZKSCAN2Q63HK3 967 aa16.84■□□□□ 0.29
THSD1-201ENST00000258613 KCNA6P17658 529 aa16.83■□□□□ 0.29
THSD1-201ENST00000258613 C8orf34Q49A92 452 aa16.83■□□□□ 0.29
THSD1-201ENST00000258613 NEFMP07197 916 aa16.83■□□□□ 0.28
THSD1-201ENST00000258613 CDC42BPGQ6DT37 1551 aa16.83■□□□□ 0.28
THSD1-201ENST00000258613 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
THSD1-201ENST00000258613 ITPRIPQ8IWB1 547 aa16.83■□□□□ 0.28
THSD1-201ENST00000258613 DZIP1LQ8IYY4 767 aaKnown RBP16.83■□□□□ 0.28
THSD1-201ENST00000258613 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
THSD1-201ENST00000258613 EIF4A2Q14240 407 aaKnown RBP16.82■□□□□ 0.28
THSD1-201ENST00000258613 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
THSD1-201ENST00000258613 SIRT1Q96EB6 747 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms