RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 TMOD3Q9NYL9 352 aa20.51■□□□□ 0.87
SORT1-201ENST00000256637 CA8P35219 290 aa20.51■□□□□ 0.87
SORT1-201ENST00000256637 SURF6O75683 361 aaKnown RBP20.5■□□□□ 0.87
SORT1-201ENST00000256637 FBXO31Q5XUX0 539 aaPredicted RBP20.5■□□□□ 0.87
SORT1-201ENST00000256637 DZIP1LQ8IYY4 767 aaKnown RBP20.5■□□□□ 0.87
SORT1-201ENST00000256637 MYOM3Q5VTT5 1437 aa20.5■□□□□ 0.87
SORT1-201ENST00000256637 GNAI1P63096 354 aa20.5■□□□□ 0.87
SORT1-201ENST00000256637 CCDC47Q96A33 483 aaKnown RBP20.5■□□□□ 0.87
SORT1-201ENST00000256637 GNL3LQ9NVN8 582 aaKnown RBP20.49■□□□□ 0.87
SORT1-201ENST00000256637 GOLGA6L19H0YKK7 550 aa20.49■□□□□ 0.87
SORT1-201ENST00000256637 USP5P45974 858 aa20.49■□□□□ 0.87
SORT1-201ENST00000256637 BICD2Q8TD16 824 aa20.49■□□□□ 0.87
SORT1-201ENST00000256637 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
SORT1-201ENST00000256637 HSPA2P54652 639 aa20.49■□□□□ 0.87
SORT1-201ENST00000256637 IGF1RP08069 1367 aa20.48■□□□□ 0.87
SORT1-201ENST00000256637 ERBINQ96RT1 1412 aa20.48■□□□□ 0.87
SORT1-201ENST00000256637 NUP133Q8WUM0 1156 aa20.48■□□□□ 0.87
SORT1-201ENST00000256637 CCDC57Q2TAC2 916 aa20.48■□□□□ 0.87
SORT1-201ENST00000256637 CCDC158Q5M9N0 1113 aa20.48■□□□□ 0.87
SORT1-201ENST00000256637 CHRNA2Q15822 529 aa20.47■□□□□ 0.87
SORT1-201ENST00000256637 TSR2Q969E8 191 aaKnown RBP20.47■□□□□ 0.87
SORT1-201ENST00000256637 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
SORT1-201ENST00000256637 NBPF1Q3BBV0 1214 aa20.47■□□□□ 0.87
SORT1-201ENST00000256637 STK3Q13188 491 aa20.47■□□□□ 0.87
SORT1-201ENST00000256637 HDGFL1Q5TGJ6 251 aa20.47■□□□□ 0.87
SORT1-201ENST00000256637 CEBPZQ03701 1054 aaKnown RBP20.46■□□□□ 0.87
SORT1-201ENST00000256637 BECN2A8MW95 431 aa20.46■□□□□ 0.87
SORT1-201ENST00000256637 SLC3A2P08195 630 aaKnown RBP20.46■□□□□ 0.87
SORT1-201ENST00000256637 ZNF592Q92610 1267 aa20.46■□□□□ 0.87
SORT1-201ENST00000256637 AK7Q96M32 723 aa20.46■□□□□ 0.87
SORT1-201ENST00000256637 ERC2O15083 957 aa20.46■□□□□ 0.87
SORT1-201ENST00000256637 TIMELESSQ9UNS1 1208 aa20.46■□□□□ 0.87
SORT1-201ENST00000256637 TRMT1LQ7Z2T5 733 aaKnown RBP20.45■□□□□ 0.86
SORT1-201ENST00000256637 RPGRQ92834 1020 aaKnown RBP20.45■□□□□ 0.86
SORT1-201ENST00000256637 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
SORT1-201ENST00000256637 KRT18P05783 430 aaKnown RBP20.45■□□□□ 0.86
SORT1-201ENST00000256637 SAFBQ15424 915 aaKnown RBP eCLIP20.45■□□□□ 0.86
SORT1-201ENST00000256637 CDK5RAP3Q96JB5 506 aa20.45■□□□□ 0.86
SORT1-201ENST00000256637 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
SORT1-201ENST00000256637 ABCF2Q9UG63 623 aa20.45■□□□□ 0.86
SORT1-201ENST00000256637 RNF20Q5VTR2 975 aa20.45■□□□□ 0.86
SORT1-201ENST00000256637 TTLL5Q6EMB2 1281 aa20.45■□□□□ 0.86
SORT1-201ENST00000256637 API5Q9BZZ5 524 aaKnown RBP20.45■□□□□ 0.86
SORT1-201ENST00000256637 BRMS1Q9HCU9 246 aa20.45■□□□□ 0.86
SORT1-201ENST00000256637 ANKRD50Q9ULJ7 1429 aa20.45■□□□□ 0.86
SORT1-201ENST00000256637 PHLDB1Q86UU1 1377 aa20.44■□□□□ 0.86
SORT1-201ENST00000256637 GPTP24298 496 aa20.42■□□□□ 0.86
SORT1-201ENST00000256637 SKIDA1Q1XH10 827 aa20.42■□□□□ 0.86
SORT1-201ENST00000256637 DDX19BQ9UMR2 479 aa20.42■□□□□ 0.86
SORT1-201ENST00000256637 RRBP1Q9P2E9 1410 aaKnown RBP20.42■□□□□ 0.86
SORT1-201ENST00000256637 FYCO1Q9BQS8 1478 aa20.41■□□□□ 0.86
SORT1-201ENST00000256637 ROCK1Q13464 1354 aa20.41■□□□□ 0.86
SORT1-201ENST00000256637 TPM1P09493 284 aa20.41■□□□□ 0.86
SORT1-201ENST00000256637 LRP2BPQ9P2M1 347 aa20.4■□□□□ 0.86
SORT1-201ENST00000256637 CD109Q6YHK3 1445 aa20.4■□□□□ 0.86
SORT1-201ENST00000256637 CNTROBQ8N137 903 aa20.4■□□□□ 0.86
SORT1-201ENST00000256637 IFT140Q96RY7 1462 aa20.39■□□□□ 0.86
SORT1-201ENST00000256637 TMEM87AQ8NBN3 555 aa20.39■□□□□ 0.86
SORT1-201ENST00000256637 CUX1P39880 1505 aa20.39■□□□□ 0.86
SORT1-201ENST00000256637 STARD3NLO95772 234 aa20.39■□□□□ 0.85
SORT1-201ENST00000256637 IGHMBP2P38935 993 aaKnown RBP20.39■□□□□ 0.85
SORT1-201ENST00000256637 SCLT1Q96NL6 688 aa20.39■□□□□ 0.85
SORT1-201ENST00000256637 NUDT16Q96DE0 195 aaKnown RBP20.38■□□□□ 0.85
SORT1-201ENST00000256637 NOB1Q9ULX3 412 aaKnown RBP20.38■□□□□ 0.85
SORT1-201ENST00000256637 NCOA2Q15596 1464 aa20.38■□□□□ 0.85
SORT1-201ENST00000256637 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
SORT1-201ENST00000256637 SMC3Q9UQE7 1217 aa20.38■□□□□ 0.85
SORT1-201ENST00000256637 ZNF76P36508 570 aa20.38■□□□□ 0.85
SORT1-201ENST00000256637 DCTN1Q14203 1278 aa20.38■□□□□ 0.85
SORT1-201ENST00000256637 CRACR2BQ8N4Y2 399 aaPredicted RBP20.38■□□□□ 0.85
SORT1-201ENST00000256637 GOLGA6L1Q8N7Z2 621 aa20.38■□□□□ 0.85
SORT1-201ENST00000256637 KRT28Q7Z3Y7 464 aa20.38■□□□□ 0.85
SORT1-201ENST00000256637 CFTRP13569 1480 aa20.38■□□□□ 0.85
SORT1-201ENST00000256637 TTC16Q8NEE8 873 aa20.37■□□□□ 0.85
SORT1-201ENST00000256637 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
SORT1-201ENST00000256637 SART3Q15020 963 aaKnown RBP20.37■□□□□ 0.85
SORT1-201ENST00000256637 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
SORT1-201ENST00000256637 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
SORT1-201ENST00000256637 TMOD2Q9NZR1 351 aa20.37■□□□□ 0.85
SORT1-201ENST00000256637 RFC4P35249 363 aa20.37■□□□□ 0.85
SORT1-201ENST00000256637 C6orf229H3BNL8 230 aa20.36■□□□□ 0.85
SORT1-201ENST00000256637 TWISTNBQ3B726 338 aaPredicted RBP20.36■□□□□ 0.85
SORT1-201ENST00000256637 EXOC5O00471 708 aa20.36■□□□□ 0.85
SORT1-201ENST00000256637 RBM26Q5T8P6 1007 aaKnown RBP20.36■□□□□ 0.85
SORT1-201ENST00000256637 RRP1P56182 461 aaKnown RBP20.36■□□□□ 0.85
SORT1-201ENST00000256637 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
SORT1-201ENST00000256637 TDO2P48775 406 aa20.35■□□□□ 0.85
SORT1-201ENST00000256637 EXOSC9Q06265 439 aaKnown RBP20.35■□□□□ 0.85
SORT1-201ENST00000256637 JARID2Q92833 1246 aaPredicted RBP20.35■□□□□ 0.85
SORT1-201ENST00000256637 NCKAP5LQ9HCH0 1330 aa20.35■□□□□ 0.85
SORT1-201ENST00000256637 ADAMTS8Q9UP79 889 aa20.35■□□□□ 0.85
SORT1-201ENST00000256637 C9orf84Q5VXU9 1444 aa20.34■□□□□ 0.85
SORT1-201ENST00000256637 CDK13Q14004 1512 aaKnown RBP20.34■□□□□ 0.85
SORT1-201ENST00000256637 IDH1O75874 414 aaKnown RBP20.34■□□□□ 0.85
SORT1-201ENST00000256637 MYD88Q99836 296 aa20.34■□□□□ 0.85
SORT1-201ENST00000256637 RBM19Q9Y4C8 960 aaKnown RBP20.34■□□□□ 0.85
SORT1-201ENST00000256637 XBP1P17861 261 aa20.34■□□□□ 0.85
SORT1-201ENST00000256637 PDILTQ8N807 584 aa20.34■□□□□ 0.85
SORT1-201ENST00000256637 BCAR3O75815 825 aa20.34■□□□□ 0.85
SORT1-201ENST00000256637 MCM10Q7L590 875 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms