RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
PDE6A-201ENST00000255266 GNL2Q13823 731 aaKnown RBP11.43□□□□□ -0.58
PDE6A-201ENST00000255266 ADGRL2O95490 1459 aa11.43□□□□□ -0.58
PDE6A-201ENST00000255266 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.58
PDE6A-201ENST00000255266 NBPF8Q3BBV2 869 aa11.43□□□□□ -0.58
PDE6A-201ENST00000255266 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
PDE6A-201ENST00000255266 ERICH6BQ5W0A0 696 aa11.43□□□□□ -0.58
PDE6A-201ENST00000255266 SULT6B1Q6IMI4 303 aa11.43□□□□□ -0.58
PDE6A-201ENST00000255266 CDCA7Q9BWT1 371 aaPredicted RBP11.43□□□□□ -0.58
PDE6A-201ENST00000255266 MLH3Q9UHC1 1453 aa11.43□□□□□ -0.58
PDE6A-201ENST00000255266 CWC22Q9HCG8 908 aaKnown RBP11.42□□□□□ -0.58
PDE6A-201ENST00000255266 PRKAR2BP31323 418 aa11.42□□□□□ -0.58
PDE6A-201ENST00000255266 ANP32EQ9BTT0 268 aa11.42□□□□□ -0.58
PDE6A-201ENST00000255266 A0A087WZG4 1122 aa11.42□□□□□ -0.58
PDE6A-201ENST00000255266 C8orf37Q96NL8 207 aa11.42□□□□□ -0.58
PDE6A-201ENST00000255266 TEX13AQ9BXU3 409 aaPredicted RBP11.42□□□□□ -0.58
PDE6A-201ENST00000255266 APAF1O14727 1248 aa11.41□□□□□ -0.58
PDE6A-201ENST00000255266 ZPR1O75312 459 aa11.41□□□□□ -0.58
PDE6A-201ENST00000255266 RGS3P49796 1198 aa11.41□□□□□ -0.58
PDE6A-201ENST00000255266 NLRP1Q9C000 1473 aa11.41□□□□□ -0.58
PDE6A-201ENST00000255266 ARAP3Q8WWN8 1544 aa11.41□□□□□ -0.58
PDE6A-201ENST00000255266 PPP2R1AP30153 589 aa11.41□□□□□ -0.58
PDE6A-201ENST00000255266 TRIM6-TRIM34B2RNG4 842 aa11.4□□□□□ -0.58
PDE6A-201ENST00000255266 ELL2O00472 640 aaPredicted RBP11.4□□□□□ -0.58
PDE6A-201ENST00000255266 GNAT3A8MTJ3 354 aa11.4□□□□□ -0.59
PDE6A-201ENST00000255266 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.59
PDE6A-201ENST00000255266 FCHSD2O94868 740 aa11.39□□□□□ -0.59
PDE6A-201ENST00000255266 SMARCC1Q92922 1105 aaPredicted RBP11.39□□□□□ -0.59
PDE6A-201ENST00000255266 AIMP1Q12904 312 aaKnown RBP11.39□□□□□ -0.59
PDE6A-201ENST00000255266 DDX19BQ9UMR2 479 aa11.39□□□□□ -0.59
PDE6A-201ENST00000255266 ACEP12821 1306 aa11.39□□□□□ -0.59
PDE6A-201ENST00000255266 PREX2Q70Z35 1606 aa11.39□□□□□ -0.59
PDE6A-201ENST00000255266 BTBD11A6QL63 1104 aa11.39□□□□□ -0.59
PDE6A-201ENST00000255266 PUS7Q96PZ0 661 aaKnown RBP11.39□□□□□ -0.59
PDE6A-201ENST00000255266 ARHGEF10O15013 1369 aa11.39□□□□□ -0.59
PDE6A-201ENST00000255266 NPHP4O75161 1426 aaPredicted RBP11.38□□□□□ -0.59
PDE6A-201ENST00000255266 TMEM2Q9UHN6 1383 aa11.38□□□□□ -0.59
PDE6A-201ENST00000255266 AK7Q96M32 723 aa11.38□□□□□ -0.59
PDE6A-201ENST00000255266 ABCC1P33527 1531 aa11.38□□□□□ -0.59
PDE6A-201ENST00000255266 IFIT2P09913 472 aaKnown RBP11.38□□□□□ -0.59
PDE6A-201ENST00000255266 AAMPQ13685 434 aa11.38□□□□□ -0.59
PDE6A-201ENST00000255266 NECTIN2Q92692 538 aa11.38□□□□□ -0.59
PDE6A-201ENST00000255266 HSP90AB3PQ58FF7 597 aa11.38□□□□□ -0.59
PDE6A-201ENST00000255266 PPIP5K1Q6PFW1 1433 aa11.38□□□□□ -0.59
PDE6A-201ENST00000255266 RUFY2Q8WXA3 655 aa11.37□□□□□ -0.59
PDE6A-201ENST00000255266 BCL11BQ9C0K0 894 aaPredicted RBP11.37□□□□□ -0.59
PDE6A-201ENST00000255266 SAMD9LQ8IVG5 1584 aa11.37□□□□□ -0.59
PDE6A-201ENST00000255266 RRS1Q15050 365 aaKnown RBP11.37□□□□□ -0.59
PDE6A-201ENST00000255266 TOMM22Q9NS69 142 aa11.37□□□□□ -0.59
PDE6A-201ENST00000255266 ANKRD36BQ8N2N9 1353 aa11.37□□□□□ -0.59
PDE6A-201ENST00000255266 HTATSF1O43719 755 aaKnown RBP11.37□□□□□ -0.59
PDE6A-201ENST00000255266 YEATS2Q9ULM3 1422 aa11.36□□□□□ -0.59
PDE6A-201ENST00000255266 IFNL2Q8IZJ0 200 aa11.36□□□□□ -0.59
PDE6A-201ENST00000255266 GNAI3P08754 354 aa11.36□□□□□ -0.59
PDE6A-201ENST00000255266 HSCBQ8IWL3 235 aa11.36□□□□□ -0.59
PDE6A-201ENST00000255266 UBTFL1P0CB47 393 aaPredicted RBP11.35□□□□□ -0.59
PDE6A-201ENST00000255266 KIF3AQ9Y496 699 aa11.35□□□□□ -0.59
PDE6A-201ENST00000255266 ANKRD24Q8TF21 1146 aa11.35□□□□□ -0.59
PDE6A-201ENST00000255266 CT47B1P0C2W7 299 aaPredicted RBP11.35□□□□□ -0.59
PDE6A-201ENST00000255266 UGGT1Q9NYU2 1555 aa11.35□□□□□ -0.59
PDE6A-201ENST00000255266 EFCAB6Q5THR3 1501 aa11.35□□□□□ -0.59
PDE6A-201ENST00000255266 POLD1P28340 1107 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 SYNE3Q6ZMZ3 975 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 ERC2O15083 957 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 HDGFL1Q5TGJ6 251 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 CCDC34Q96HJ3 373 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 DDB1Q16531 1140 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 NME9Q86XW9 330 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 CLUAP1Q96AJ1 413 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 YTHDC2Q9H6S0 1430 aaKnown RBP11.34□□□□□ -0.59
PDE6A-201ENST00000255266 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
PDE6A-201ENST00000255266 TTC37Q6PGP7 1564 aa11.33□□□□□ -0.6
PDE6A-201ENST00000255266 GOLGA6L4A6NEF3 574 aa11.33□□□□□ -0.6
PDE6A-201ENST00000255266 MFAP1P55081 439 aaKnown RBP11.33□□□□□ -0.6
PDE6A-201ENST00000255266 DZIP1LQ8IYY4 767 aaKnown RBP11.33□□□□□ -0.6
PDE6A-201ENST00000255266 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
PDE6A-201ENST00000255266 PLEKHG1Q9ULL1 1385 aa11.33□□□□□ -0.6
PDE6A-201ENST00000255266 SIRT1Q96EB6 747 aa11.32□□□□□ -0.6
PDE6A-201ENST00000255266 TBC1D2BQ9UPU7 963 aa11.32□□□□□ -0.6
PDE6A-201ENST00000255266 ZNF772Q68DY9 489 aaPredicted RBP11.32□□□□□ -0.6
PDE6A-201ENST00000255266 TCP11L2Q8N4U5 519 aa11.32□□□□□ -0.6
PDE6A-201ENST00000255266 NFE2L2Q16236 605 aa11.32□□□□□ -0.6
PDE6A-201ENST00000255266 CNNM1Q9NRU3 951 aa11.32□□□□□ -0.6
PDE6A-201ENST00000255266 KDM5CP41229 1560 aa11.32□□□□□ -0.6
PDE6A-201ENST00000255266 ZBED9Q6R2W3 1325 aa11.32□□□□□ -0.6
PDE6A-201ENST00000255266 B4GALNT3Q6L9W6 998 aa11.32□□□□□ -0.6
PDE6A-201ENST00000255266 SLAIN2Q9P270 581 aa11.32□□□□□ -0.6
PDE6A-201ENST00000255266 WDR63Q8IWG1 891 aa11.31□□□□□ -0.6
PDE6A-201ENST00000255266 ZCRB1Q8TBF4 217 aaKnown RBP11.31□□□□□ -0.6
PDE6A-201ENST00000255266 FAM177BA6PVY3 158 aa11.31□□□□□ -0.6
PDE6A-201ENST00000255266 DIAPH3Q9NSV4 1193 aa11.31□□□□□ -0.6
PDE6A-201ENST00000255266 CCT4P50991 539 aaKnown RBP11.31□□□□□ -0.6
PDE6A-201ENST00000255266 AKAP17AQ02040 695 aaKnown RBP11.31□□□□□ -0.6
PDE6A-201ENST00000255266 FMNL2Q96PY5 1086 aa11.31□□□□□ -0.6
PDE6A-201ENST00000255266 TWISTNBQ3B726 338 aaPredicted RBP11.31□□□□□ -0.6
PDE6A-201ENST00000255266 ARHGEF12Q9NZN5 1544 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 WDHD1O75717 1129 aaPredicted RBP11.3□□□□□ -0.6
PDE6A-201ENST00000255266 SLC3A2P08195 630 aaKnown RBP11.3□□□□□ -0.6
PDE6A-201ENST00000255266 IGHMBP2P38935 993 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms