RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 C17orf53Q8N3J3 647 aaPredicted RBP9.26□□□□□ -0.93
USP29-201ENST00000254181 STK26Q9P289 416 aa9.26□□□□□ -0.93
USP29-201ENST00000254181 RHBDL3P58872 404 aa9.26□□□□□ -0.93
USP29-201ENST00000254181 LRCH2Q5VUJ6 765 aa9.26□□□□□ -0.93
USP29-201ENST00000254181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.26□□□□□ -0.93
USP29-201ENST00000254181 HTATSF1O43719 755 aaKnown RBP9.25□□□□□ -0.93
USP29-201ENST00000254181 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
USP29-201ENST00000254181 PEG3Q9GZU2 1588 aa9.25□□□□□ -0.93
USP29-201ENST00000254181 CT47B1P0C2W7 299 aaPredicted RBP9.25□□□□□ -0.93
USP29-201ENST00000254181 TERF2Q15554 542 aa9.25□□□□□ -0.93
USP29-201ENST00000254181 FAM212AQ96EL1 285 aa9.25□□□□□ -0.93
USP29-201ENST00000254181 HNRNPH2P55795 449 aaKnown RBP9.25□□□□□ -0.93
USP29-201ENST00000254181 PPP2R5AQ15172 486 aa9.25□□□□□ -0.93
USP29-201ENST00000254181 CCDC91Q7Z6B0 441 aa9.25□□□□□ -0.93
USP29-201ENST00000254181 CCDC97Q96F63 343 aaPredicted RBP9.25□□□□□ -0.93
USP29-201ENST00000254181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.25□□□□□ -0.93
USP29-201ENST00000254181 SART3Q15020 963 aaKnown RBP9.24□□□□□ -0.93
USP29-201ENST00000254181 CT47A1Q5JQC4 288 aaPredicted RBP9.24□□□□□ -0.93
USP29-201ENST00000254181 DNAJC14Q6Y2X3 702 aaPredicted RBP9.24□□□□□ -0.93
USP29-201ENST00000254181 EPB41L2O43491 1005 aaKnown RBP9.24□□□□□ -0.93
USP29-201ENST00000254181 RAD51AP2Q09MP3 1159 aa9.24□□□□□ -0.93
USP29-201ENST00000254181 TTLL5Q6EMB2 1281 aa9.24□□□□□ -0.93
USP29-201ENST00000254181 DRC7Q8IY82 874 aa9.24□□□□□ -0.93
USP29-201ENST00000254181 RBSNQ9H1K0 784 aa9.24□□□□□ -0.93
USP29-201ENST00000254181 SCP2P22307 547 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 E2F4Q16254 413 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 CCDC7Q96M83 1385 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 POLR3GO15318 223 aaPredicted RBP9.23□□□□□ -0.93
USP29-201ENST00000254181 BIRC2Q13490 618 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 MNS1Q8NEH6 495 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 TTC12Q9H892 705 aaPredicted RBP9.23□□□□□ -0.93
USP29-201ENST00000254181 ABCC8Q09428 1581 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 SYCE3A1L190 88 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 H0YHG0 523 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 U2SURPO15042 1029 aaKnown RBP9.23□□□□□ -0.93
USP29-201ENST00000254181 VASPP50552 380 aaPredicted RBP9.23□□□□□ -0.93
USP29-201ENST00000254181 SARNPP82979 210 aaKnown RBP9.23□□□□□ -0.93
USP29-201ENST00000254181 MAP2K1Q02750 393 aaPredicted RBP9.23□□□□□ -0.93
USP29-201ENST00000254181 TTC31Q49AM3 519 aaPredicted RBP9.23□□□□□ -0.93
USP29-201ENST00000254181 CCDC191Q8NCU4 936 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 CALR3Q96L12 384 aaKnown RBP9.23□□□□□ -0.93
USP29-201ENST00000254181 TBC1D32Q96NH3 1257 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 KLHL42Q9P2K6 505 aa9.23□□□□□ -0.93
USP29-201ENST00000254181 NRDCO43847 1150 aa9.22□□□□□ -0.93
USP29-201ENST00000254181 ZNF853P0CG23 659 aa9.22□□□□□ -0.93
USP29-201ENST00000254181 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
USP29-201ENST00000254181 PNISRQ8TF01 805 aaKnown RBP9.22□□□□□ -0.93
USP29-201ENST00000254181 SLFN14P0C7P3 912 aa9.22□□□□□ -0.93
USP29-201ENST00000254181 HDAC1Q13547 482 aaPredicted RBP9.22□□□□□ -0.93
USP29-201ENST00000254181 KLHL40Q2TBA0 621 aa9.22□□□□□ -0.93
USP29-201ENST00000254181 CCDC112Q8NEF3 446 aa9.22□□□□□ -0.93
USP29-201ENST00000254181 PPFIA4O75335 1185 aa9.22□□□□□ -0.93
USP29-201ENST00000254181 PRPF40AO75400 957 aaKnown RBP9.22□□□□□ -0.93
USP29-201ENST00000254181 CASQ1P31415 396 aa9.22□□□□□ -0.93
USP29-201ENST00000254181 ZSCAN23Q3MJ62 389 aa9.22□□□□□ -0.93
USP29-201ENST00000254181 LONRF3Q496Y0 759 aa9.22□□□□□ -0.93
USP29-201ENST00000254181 RBM28Q9NW13 759 aaKnown RBP9.22□□□□□ -0.93
USP29-201ENST00000254181 GYS2P54840 703 aa9.21□□□□□ -0.93
USP29-201ENST00000254181 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.93
USP29-201ENST00000254181 IFT57Q9NWB7 429 aa9.21□□□□□ -0.93
USP29-201ENST00000254181 JRKLQ9Y4A0 524 aa9.21□□□□□ -0.93
USP29-201ENST00000254181 MRVI1Q9Y6F6 885 aa9.21□□□□□ -0.93
USP29-201ENST00000254181 RPAINQ86UA6 219 aa9.21□□□□□ -0.93
USP29-201ENST00000254181 ANKRD20A12PQ8NF67 263 aa9.21□□□□□ -0.94
USP29-201ENST00000254181 A0A1B0GUL7 405 aa9.2□□□□□ -0.94
USP29-201ENST00000254181 ZKSCAN2Q63HK3 967 aa9.2□□□□□ -0.94
USP29-201ENST00000254181 SYAP1Q96A49 352 aaPredicted RBP9.2□□□□□ -0.94
USP29-201ENST00000254181 BRMS1Q9HCU9 246 aa9.2□□□□□ -0.94
USP29-201ENST00000254181 NBPF6Q5VWK0 638 aa9.2□□□□□ -0.94
USP29-201ENST00000254181 NBPF5PQ86XG9 351 aaPredicted RBP9.2□□□□□ -0.94
USP29-201ENST00000254181 PROCA1Q8NCQ7 364 aaPredicted RBP9.2□□□□□ -0.94
USP29-201ENST00000254181 CXorf38Q8TB03 319 aa9.2□□□□□ -0.94
USP29-201ENST00000254181 NBPF4Q96M43 638 aa9.2□□□□□ -0.94
USP29-201ENST00000254181 CIZ1Q9ULV3 898 aaPredicted RBP9.2□□□□□ -0.94
USP29-201ENST00000254181 CCDC88BA6NC98 1476 aa9.2□□□□□ -0.94
USP29-201ENST00000254181 DNAJC21Q5F1R6 531 aaKnown RBP9.2□□□□□ -0.94
USP29-201ENST00000254181 RNF217Q8TC41 542 aa9.2□□□□□ -0.94
USP29-201ENST00000254181 WDR78Q5VTH9 848 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 TSPAN18Q96SJ8 248 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 SUFUQ9UMX1 484 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 FRMD4BQ9Y2L6 1034 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 FHAD1B1AJZ9 1412 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 MAP2K2P36507 400 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 PIBF1Q8WXW3 757 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 ATP6V1AP38606 617 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 SPC24Q8NBT2 197 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 NEK11Q8NG66 645 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 TSPY26PQ9H489 355 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 MAPKBP1O60336 1514 aa9.19□□□□□ -0.94
USP29-201ENST00000254181 TXLNBQ8N3L3 684 aa9.18□□□□□ -0.94
USP29-201ENST00000254181 GIMAP7Q8NHV1 300 aa9.18□□□□□ -0.94
USP29-201ENST00000254181 GTF3C6Q969F1 213 aa9.18□□□□□ -0.94
USP29-201ENST00000254181 CXorf56Q9H5V9 222 aa9.18□□□□□ -0.94
USP29-201ENST00000254181 GABBR1Q9UBS5 961 aa9.18□□□□□ -0.94
USP29-201ENST00000254181 LRRFIP2Q9Y608 721 aaKnown RBP9.18□□□□□ -0.94
USP29-201ENST00000254181 KIF7Q2M1P5 1343 aa9.18□□□□□ -0.94
USP29-201ENST00000254181 KDM2BQ8NHM5 1336 aa9.18□□□□□ -0.94
USP29-201ENST00000254181 GUCY2CP25092 1073 aa9.18□□□□□ -0.94
USP29-201ENST00000254181 MNAT1P51948 309 aa9.18□□□□□ -0.94
USP29-201ENST00000254181 TPM4P67936 248 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms