RNA–Protein interactions for RNA: ENST00000251849.8

RAF1-201, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAF1, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-201ENST00000251849 HDAC1Q13547 482 aaPredicted RBP17.95■□□□□ 0.46
RAF1-201ENST00000251849 SNX21Q969T3 373 aa17.95■□□□□ 0.46
RAF1-201ENST00000251849 TTC12Q9H892 705 aaPredicted RBP17.95■□□□□ 0.46
RAF1-201ENST00000251849 LMBRD1Q9NUN5 540 aa17.95■□□□□ 0.46
RAF1-201ENST00000251849 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
RAF1-201ENST00000251849 TMPOP42166 694 aaKnown RBP17.95■□□□□ 0.46
RAF1-201ENST00000251849 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
RAF1-201ENST00000251849 EIF4G3O43432 1585 aaKnown RBP17.94■□□□□ 0.46
RAF1-201ENST00000251849 CIZ1Q9ULV3 898 aaPredicted RBP17.94■□□□□ 0.46
RAF1-201ENST00000251849 KIF16BQ96L93 1317 aa17.94■□□□□ 0.46
RAF1-201ENST00000251849 ISY1Q9ULR0 285 aaKnown RBP17.94■□□□□ 0.46
RAF1-201ENST00000251849 TSPYL6Q8N831 410 aa17.93■□□□□ 0.46
RAF1-201ENST00000251849 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
RAF1-201ENST00000251849 NOL7Q9UMY1 257 aaKnown RBP17.92■□□□□ 0.46
RAF1-201ENST00000251849 ZKSCAN5Q9Y2L8 839 aa17.92■□□□□ 0.46
RAF1-201ENST00000251849 ATP10BO94823 1461 aa17.92■□□□□ 0.46
RAF1-201ENST00000251849 PTPRGP23470 1445 aa17.91■□□□□ 0.46
RAF1-201ENST00000251849 ITSN2Q9NZM3 1697 aa17.91■□□□□ 0.46
RAF1-201ENST00000251849 SRPK2P78362 688 aaKnown RBP17.9■□□□□ 0.46
RAF1-201ENST00000251849 USP25Q9UHP3 1055 aa17.9■□□□□ 0.46
RAF1-201ENST00000251849 TRIM35Q9UPQ4 493 aa17.9■□□□□ 0.46
RAF1-201ENST00000251849 SCAF11Q99590 1463 aaKnown RBP17.9■□□□□ 0.46
RAF1-201ENST00000251849 GSPT1P15170 499 aaKnown RBP17.9■□□□□ 0.46
RAF1-201ENST00000251849 CHMP3Q9Y3E7 222 aa17.9■□□□□ 0.46
RAF1-201ENST00000251849 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.9■□□□□ 0.466e-8■■□□□ 12.3
RAF1-201ENST00000251849 CCDC141Q6ZP82 1450 aa17.9■□□□□ 0.46
RAF1-201ENST00000251849 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
RAF1-201ENST00000251849 IPO8O15397 1037 aaKnown RBP17.9■□□□□ 0.46
RAF1-201ENST00000251849 BMP2KLQ5H9B9 411 aa17.9■□□□□ 0.46
RAF1-201ENST00000251849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.89■□□□□ 0.45
RAF1-201ENST00000251849 SYCP2Q9BX26 1530 aa17.89■□□□□ 0.45
RAF1-201ENST00000251849 CDC45O75419 566 aa17.89■□□□□ 0.45
RAF1-201ENST00000251849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.89■□□□□ 0.45
RAF1-201ENST00000251849 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
RAF1-201ENST00000251849 TARBP1Q13395 1621 aaKnown RBP17.88■□□□□ 0.45
RAF1-201ENST00000251849 NEK4P51957 841 aa17.88■□□□□ 0.45
RAF1-201ENST00000251849 FGD1P98174 961 aa17.88■□□□□ 0.45
RAF1-201ENST00000251849 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
RAF1-201ENST00000251849 SIRT2Q8IXJ6 389 aa17.88■□□□□ 0.45
RAF1-201ENST00000251849 SPC24Q8NBT2 197 aa17.88■□□□□ 0.45
RAF1-201ENST00000251849 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
RAF1-201ENST00000251849 CARMIL2Q6F5E8 1435 aa17.88■□□□□ 0.45
RAF1-201ENST00000251849 ARHGAP5Q13017 1502 aa17.87■□□□□ 0.45
RAF1-201ENST00000251849 DCTN1Q14203 1278 aa17.87■□□□□ 0.45
RAF1-201ENST00000251849 PPP4R3BQ5MIZ7 849 aa17.87■□□□□ 0.45
RAF1-201ENST00000251849 PDE4CQ08493 712 aa17.87■□□□□ 0.45
RAF1-201ENST00000251849 BBXQ8WY36 941 aaPredicted RBP17.87■□□□□ 0.45
RAF1-201ENST00000251849 PBRM1Q86U86 1689 aa17.86■□□□□ 0.45
RAF1-201ENST00000251849 UPF3BQ9BZI7 483 aaKnown RBP17.86■□□□□ 0.45
RAF1-201ENST00000251849 POLR3AO14802 1390 aaPredicted RBP17.86■□□□□ 0.45
RAF1-201ENST00000251849 SYNMO15061 1565 aa17.86■□□□□ 0.45
RAF1-201ENST00000251849 SASS6Q6UVJ0 657 aa17.86■□□□□ 0.45
RAF1-201ENST00000251849 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
RAF1-201ENST00000251849 GADD45BO75293 160 aaPredicted RBP17.85■□□□□ 0.45
RAF1-201ENST00000251849 ZDHHC9Q9Y397 364 aa17.85■□□□□ 0.45
RAF1-201ENST00000251849 VGLL3A8MV65 326 aa17.85■□□□□ 0.45
RAF1-201ENST00000251849 NUCB2P80303 420 aa17.85■□□□□ 0.45
RAF1-201ENST00000251849 GRIN2AQ12879 1464 aa17.84■□□□□ 0.45
RAF1-201ENST00000251849 KRT24Q2M2I5 525 aa17.84■□□□□ 0.45
RAF1-201ENST00000251849 KIAA2012Q0VF49 1180 aa17.84■□□□□ 0.45
RAF1-201ENST00000251849 CCDC27Q2M243 656 aa17.84■□□□□ 0.45
RAF1-201ENST00000251849 CCDC39Q9UFE4 941 aa17.84■□□□□ 0.45
RAF1-201ENST00000251849 ZNF445P59923 1031 aa17.83■□□□□ 0.45
RAF1-201ENST00000251849 NCOA3Q9Y6Q9 1424 aa17.83■□□□□ 0.45
RAF1-201ENST00000251849 ZBTB22O15209 634 aa17.83■□□□□ 0.44
RAF1-201ENST00000251849 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
RAF1-201ENST00000251849 ATP2B3Q16720 1220 aa17.83■□□□□ 0.44
RAF1-201ENST00000251849 NGEFQ8N5V2 710 aa17.83■□□□□ 0.44
RAF1-201ENST00000251849 FAM83GA6ND36 823 aa17.83■□□□□ 0.44
RAF1-201ENST00000251849 PTMSP20962 102 aa17.82■□□□□ 0.44
RAF1-201ENST00000251849 LRSAM1Q6UWE0 723 aa17.82■□□□□ 0.44
RAF1-201ENST00000251849 MYO5CQ9NQX4 1742 aa17.82■□□□□ 0.44
RAF1-201ENST00000251849 DYNC1I1O14576 645 aa17.82■□□□□ 0.44
RAF1-201ENST00000251849 ST18O60284 1047 aa17.82■□□□□ 0.44
RAF1-201ENST00000251849 SPAG9O60271 1321 aaKnown RBP17.81■□□□□ 0.44
RAF1-201ENST00000251849 ERVK-7P63135 1459 aa17.81■□□□□ 0.44
RAF1-201ENST00000251849 ZBTB7BO15156 539 aaPredicted RBP17.81■□□□□ 0.44
RAF1-201ENST00000251849 ZNF500O60304 480 aaPredicted RBP17.81■□□□□ 0.44
RAF1-201ENST00000251849 RABEP1Q15276 862 aa17.81■□□□□ 0.44
RAF1-201ENST00000251849 MINK1Q8N4C8 1332 aaPredicted RBP17.81■□□□□ 0.44
RAF1-201ENST00000251849 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
RAF1-201ENST00000251849 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
RAF1-201ENST00000251849 SLC24A1O60721 1099 aa17.81■□□□□ 0.44
RAF1-201ENST00000251849 SLC4A10Q6U841 1118 aa17.81■□□□□ 0.44
RAF1-201ENST00000251849 MAP7D2Q96T17 732 aa17.81■□□□□ 0.44
RAF1-201ENST00000251849 CHMP4BQ9H444 224 aaKnown RBP17.81■□□□□ 0.44
RAF1-201ENST00000251849 HCLS1P14317 486 aaPredicted RBP17.8■□□□□ 0.44
RAF1-201ENST00000251849 GGT6Q6P531 493 aa17.8■□□□□ 0.44
RAF1-201ENST00000251849 SOX12O15370 315 aa17.8■□□□□ 0.44
RAF1-201ENST00000251849 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.447e-7■■■□□ 16.7
RAF1-201ENST00000251849 CSPP1Q1MSJ5 1256 aa17.8■□□□□ 0.44
RAF1-201ENST00000251849 PLEKHM2Q8IWE5 1019 aa17.8■□□□□ 0.44
RAF1-201ENST00000251849 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
RAF1-201ENST00000251849 SDSP20132 328 aa17.8■□□□□ 0.44
RAF1-201ENST00000251849 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
RAF1-201ENST00000251849 TSPY26PQ9H489 355 aa17.8■□□□□ 0.44
RAF1-201ENST00000251849 UGGT1Q9NYU2 1555 aa17.8■□□□□ 0.44
RAF1-201ENST00000251849 PHACTR3Q96KR7 559 aa17.79■□□□□ 0.44
RAF1-201ENST00000251849 RILPL2Q969X0 211 aa17.79■□□□□ 0.44
RAF1-201ENST00000251849 CLASP1Q7Z460 1538 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms