RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 GRM1Q13255 1194 aa4.72□□□□□ -1.65
PHTF2-201ENST00000248550 FKBP8Q14318 412 aa4.72□□□□□ -1.65
PHTF2-201ENST00000248550 KRT28Q7Z3Y7 464 aa4.72□□□□□ -1.65
PHTF2-201ENST00000248550 HFM1A2PYH4 1435 aa4.72□□□□□ -1.65
PHTF2-201ENST00000248550 RFX1P22670 979 aa4.72□□□□□ -1.65
PHTF2-201ENST00000248550 ZEB1P37275 1124 aaPredicted RBP4.72□□□□□ -1.65
PHTF2-201ENST00000248550 SMG6Q86US8 1419 aaKnown RBP4.71□□□□□ -1.65
PHTF2-201ENST00000248550 WWC1Q8IX03 1113 aa4.71□□□□□ -1.65
PHTF2-201ENST00000248550 TMC1Q8TDI8 760 aa4.71□□□□□ -1.65
PHTF2-201ENST00000248550 SIRT1Q96EB6 747 aa4.71□□□□□ -1.65
PHTF2-201ENST00000248550 USP35Q9P2H5 1018 aa4.71□□□□□ -1.65
PHTF2-201ENST00000248550 ABT1Q9ULW3 272 aaKnown RBP4.71□□□□□ -1.65
PHTF2-201ENST00000248550 MAPK8IP2Q13387 824 aaPredicted RBP4.71□□□□□ -1.66
PHTF2-201ENST00000248550 SEPT12Q8IYM1 358 aa4.71□□□□□ -1.66
PHTF2-201ENST00000248550 IQGAP3Q86VI3 1631 aa4.71□□□□□ -1.66
PHTF2-201ENST00000248550 CCDC85CA6NKD9 419 aa4.71□□□□□ -1.66
PHTF2-201ENST00000248550 UPF1Q92900 1129 aaKnown RBP eCLIP4.71□□□□□ -1.663e-6■■■■□ 24.2
PHTF2-201ENST00000248550 TRIM34Q9BYJ4 488 aa4.71□□□□□ -1.66
PHTF2-201ENST00000248550 BIN2Q9UBW5 565 aaPredicted RBP4.71□□□□□ -1.66
PHTF2-201ENST00000248550 ZNF652Q9Y2D9 606 aa4.71□□□□□ -1.66
PHTF2-201ENST00000248550 R3HDM1Q15032 1099 aaKnown RBP4.7□□□□□ -1.66
PHTF2-201ENST00000248550 TTC5Q8N0Z6 440 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 CHIC2Q9UKJ5 165 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 NUDCQ9Y266 331 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 AMOTL2Q9Y2J4 779 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 NINLQ9Y2I6 1382 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 LRRC7Q96NW7 1537 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 MAP2K1Q02750 393 aaPredicted RBP4.7□□□□□ -1.66
PHTF2-201ENST00000248550 PHF8Q9UPP1 1060 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 HDAC5Q9UQL6 1122 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 ZFYVE9O95405 1425 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 FCHSD2O94868 740 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 MLLT1Q03111 559 aaPredicted RBP4.7□□□□□ -1.66
PHTF2-201ENST00000248550 RRP7BPQ9NSQ0 103 aa4.7□□□□□ -1.66
PHTF2-201ENST00000248550 NOS1P29475 1434 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 HOOK2Q96ED9 719 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 BCL2L13Q9BXK5 485 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 SPG7Q9UQ90 795 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 AXDND1Q5T1B0 1012 aaPredicted RBP4.69□□□□□ -1.66
PHTF2-201ENST00000248550 IFFO2Q5TF58 517 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 SUPT20HQ8NEM7 779 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 SHPRHQ149N8 1683 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 RRBP1Q9P2E9 1410 aaKnown RBP4.69□□□□□ -1.66
PHTF2-201ENST00000248550 RIMS2Q9UQ26 1411 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 NPM3O75607 178 aaKnown RBP4.69□□□□□ -1.66
PHTF2-201ENST00000248550 BICDL1Q6ZP65 573 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 GJD4Q96KN9 370 aaPredicted RBP4.69□□□□□ -1.66
PHTF2-201ENST00000248550 TMOD2Q9NZR1 351 aa4.69□□□□□ -1.66
PHTF2-201ENST00000248550 PSDA5PKW4 1024 aaPredicted RBP4.69□□□□□ -1.66
PHTF2-201ENST00000248550 REM2Q8IYK8 340 aaPredicted RBP4.68□□□□□ -1.66
PHTF2-201ENST00000248550 KIF7Q2M1P5 1343 aa4.68□□□□□ -1.66
PHTF2-201ENST00000248550 SETD1AO15047 1707 aaKnown RBP4.68□□□□□ -1.66
PHTF2-201ENST00000248550 UBR1Q8IWV7 1749 aa4.68□□□□□ -1.66
PHTF2-201ENST00000248550 KIF1AQ12756 1690 aa4.68□□□□□ -1.66
PHTF2-201ENST00000248550 ST5P78524 1137 aa4.68□□□□□ -1.66
PHTF2-201ENST00000248550 ZNF526Q8TF50 670 aaPredicted RBP4.68□□□□□ -1.66
PHTF2-201ENST00000248550 NOL10Q9BSC4 688 aaKnown RBP4.68□□□□□ -1.66
PHTF2-201ENST00000248550 HOXD10P28358 340 aa4.68□□□□□ -1.66
PHTF2-201ENST00000248550 RFC4P35249 363 aa4.68□□□□□ -1.66
PHTF2-201ENST00000248550 RTF1Q92541 710 aaKnown RBP4.68□□□□□ -1.66
PHTF2-201ENST00000248550 TMEM94Q12767 1356 aa4.68□□□□□ -1.66
PHTF2-201ENST00000248550 NEXMIFQ5QGS0 1516 aa4.68□□□□□ -1.66
PHTF2-201ENST00000248550 CEP152O94986 1710 aa4.68□□□□□ -1.66
PHTF2-201ENST00000248550 THRAP3Q9Y2W1 955 aaKnown RBP4.68□□□□□ -1.66
PHTF2-201ENST00000248550 ALKQ9UM73 1620 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 C1QTNF8P60827 252 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 MTFR1LQ9H019 292 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 MTIF3Q9H2K0 278 aaKnown RBP4.67□□□□□ -1.66
PHTF2-201ENST00000248550 ZNF330Q9Y3S2 320 aaPredicted RBP4.67□□□□□ -1.66
PHTF2-201ENST00000248550 ADGRB2O60241 1585 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 TCP11L2Q8N4U5 519 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 ABTB2Q8N961 1025 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 CABP1Q9NZU7 370 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 BCS1LQ9Y276 419 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 LAMC1P11047 1609 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 GRIPAP1Q4V328 841 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 ZNF692Q9BU19 519 aaPredicted RBP4.67□□□□□ -1.66
PHTF2-201ENST00000248550 SETBP1Q9Y6X0 1596 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 BLMP54132 1417 aaPredicted RBP4.67□□□□□ -1.66
PHTF2-201ENST00000248550 ANKRD50Q9ULJ7 1429 aa4.67□□□□□ -1.66
PHTF2-201ENST00000248550 CRBNQ96SW2 442 aa4.66□□□□□ -1.66
PHTF2-201ENST00000248550 RALGAPBQ86X10 1494 aa4.66□□□□□ -1.66
PHTF2-201ENST00000248550 EIF5P55010 431 aaKnown RBP4.66□□□□□ -1.66
PHTF2-201ENST00000248550 AKAP4Q5JQC9 854 aa4.66□□□□□ -1.66
PHTF2-201ENST00000248550 HTATIP2Q9BUP3 242 aa4.66□□□□□ -1.66
PHTF2-201ENST00000248550 FSTL1Q12841 308 aa4.66□□□□□ -1.66
PHTF2-201ENST00000248550 NBPF11Q86T75 865 aa4.66□□□□□ -1.66
PHTF2-201ENST00000248550 CLSPNQ9HAW4 1339 aa4.66□□□□□ -1.66
PHTF2-201ENST00000248550 NLGN1Q8N2Q7 840 aa4.66□□□□□ -1.66
PHTF2-201ENST00000248550 ANKARQ7Z5J8 1434 aa4.65□□□□□ -1.66
PHTF2-201ENST00000248550 ADGRL3Q9HAR2 1447 aa4.65□□□□□ -1.66
PHTF2-201ENST00000248550 RGL3Q3MIN7 710 aa4.65□□□□□ -1.66
PHTF2-201ENST00000248550 ILDR2Q71H61 639 aa4.65□□□□□ -1.66
PHTF2-201ENST00000248550 CCDC144AA2RUR9 1427 aa4.65□□□□□ -1.67
PHTF2-201ENST00000248550 CAPN2P17655 700 aa4.65□□□□□ -1.67
PHTF2-201ENST00000248550 NLRP6P59044 892 aa4.65□□□□□ -1.67
PHTF2-201ENST00000248550 FAM98CQ17RN3 349 aaKnown RBP4.65□□□□□ -1.67
PHTF2-201ENST00000248550 ATF5Q9Y2D1 282 aaPredicted RBP4.65□□□□□ -1.67
PHTF2-201ENST00000248550 USP19O94966 1318 aa4.65□□□□□ -1.67
PHTF2-201ENST00000248550 PHLPP1O60346 1717 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms