RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 TBX22Q9Y458 520 aa24.33■■□□□ 1.49
TUBA4A-201ENST00000248437 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.48
TUBA4A-201ENST00000248437 RBM19Q9Y4C8 960 aaKnown RBP24.33■■□□□ 1.48
TUBA4A-201ENST00000248437 CCDC27Q2M243 656 aa24.32■■□□□ 1.48
TUBA4A-201ENST00000248437 SPINK5Q9NQ38 1064 aaPredicted RBP24.32■■□□□ 1.48
TUBA4A-201ENST00000248437 TCP11L2Q8N4U5 519 aa24.31■■□□□ 1.48
TUBA4A-201ENST00000248437 PNPLA6Q8IY17 1366 aa24.31■■□□□ 1.48
TUBA4A-201ENST00000248437 DIP2AQ14689 1571 aa24.31■■□□□ 1.48
TUBA4A-201ENST00000248437 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.3■■□□□ 1.48
TUBA4A-201ENST00000248437 NUDT16Q96DE0 195 aaKnown RBP24.29■■□□□ 1.48
TUBA4A-201ENST00000248437 CCDC61Q9Y6R9 512 aa24.29■■□□□ 1.48
TUBA4A-201ENST00000248437 PLIN1O60240 522 aa24.29■■□□□ 1.48
TUBA4A-201ENST00000248437 U2AF1L5P0DN76 240 aaPredicted RBP24.29■■□□□ 1.48
TUBA4A-201ENST00000248437 U2AF1Q01081 240 aaKnown RBP eCLIP24.29■■□□□ 1.48
TUBA4A-201ENST00000248437 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.29■■□□□ 1.48
TUBA4A-201ENST00000248437 AMOTL2Q9Y2J4 779 aa24.29■■□□□ 1.48
TUBA4A-201ENST00000248437 TOPAZ1Q8N9V7 1692 aa24.28■■□□□ 1.48
TUBA4A-201ENST00000248437 MAP2P11137 1827 aaKnown RBP24.28■■□□□ 1.48
TUBA4A-201ENST00000248437 WDR63Q8IWG1 891 aa24.27■■□□□ 1.48
TUBA4A-201ENST00000248437 DMRT2Q9Y5R5 561 aa24.26■■□□□ 1.47
TUBA4A-201ENST00000248437 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
TUBA4A-201ENST00000248437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.24■■□□□ 1.47
TUBA4A-201ENST00000248437 CRBNQ96SW2 442 aa24.23■■□□□ 1.47
TUBA4A-201ENST00000248437 NPHP4O75161 1426 aaPredicted RBP24.23■■□□□ 1.47
TUBA4A-201ENST00000248437 PTCH1Q13635 1447 aa24.23■■□□□ 1.47
TUBA4A-201ENST00000248437 ZNF692Q9BU19 519 aaPredicted RBP24.22■■□□□ 1.47
TUBA4A-201ENST00000248437 DIAPH1O60610 1272 aaKnown RBP24.22■■□□□ 1.47
TUBA4A-201ENST00000248437 HSPA2P54652 639 aa24.22■■□□□ 1.47
TUBA4A-201ENST00000248437 RRP7AQ9Y3A4 280 aaKnown RBP24.22■■□□□ 1.47
TUBA4A-201ENST00000248437 XRN1Q8IZH2 1706 aaKnown RBP24.21■■□□□ 1.47
TUBA4A-201ENST00000248437 PRR36Q9H6K5 1346 aa24.21■■□□□ 1.47
TUBA4A-201ENST00000248437 KCNA6P17658 529 aa24.21■■□□□ 1.47
TUBA4A-201ENST00000248437 PLEKHF1Q96S99 279 aa24.21■■□□□ 1.47
TUBA4A-201ENST00000248437 NRKQ7Z2Y5 1582 aa24.21■■□□□ 1.47
TUBA4A-201ENST00000248437 NEUROD2Q15784 382 aa24.2■■□□□ 1.47
TUBA4A-201ENST00000248437 AATKQ6ZMQ8 1374 aa24.2■■□□□ 1.46
TUBA4A-201ENST00000248437 U2SURPO15042 1029 aaKnown RBP24.2■■□□□ 1.46
TUBA4A-201ENST00000248437 PNNQ9H307 717 aaKnown RBP24.2■■□□□ 1.46
TUBA4A-201ENST00000248437 C20orf194Q5TEA3 1177 aa24.18■■□□□ 1.46
TUBA4A-201ENST00000248437 POLKQ9UBT6 870 aa24.18■■□□□ 1.46
TUBA4A-201ENST00000248437 CDK12Q9NYV4 1490 aaPredicted RBP24.18■■□□□ 1.46
TUBA4A-201ENST00000248437 PIK3R4Q99570 1358 aa24.17■■□□□ 1.46
TUBA4A-201ENST00000248437 MAPK8IP3Q9UPT6 1336 aa24.15■■□□□ 1.46
TUBA4A-201ENST00000248437 NME9Q86XW9 330 aa24.15■■□□□ 1.46
TUBA4A-201ENST00000248437 CHD2O14647 1828 aaKnown RBP24.15■■□□□ 1.46
TUBA4A-201ENST00000248437 PLEKHG3A1L390 1219 aa24.14■■□□□ 1.45
TUBA4A-201ENST00000248437 MYH16Q9H6N6 1097 aa24.14■■□□□ 1.45
TUBA4A-201ENST00000248437 LMTK3Q96Q04 1460 aa24.14■■□□□ 1.45
TUBA4A-201ENST00000248437 COG3Q96JB2 828 aa24.13■■□□□ 1.45
TUBA4A-201ENST00000248437 LRRC7Q96NW7 1537 aa24.13■■□□□ 1.45
TUBA4A-201ENST00000248437 TMPOP42166 694 aaKnown RBP24.13■■□□□ 1.45
TUBA4A-201ENST00000248437 FCHSD2O94868 740 aa24.12■■□□□ 1.45
TUBA4A-201ENST00000248437 RBM33Q96EV2 1170 aaKnown RBP24.12■■□□□ 1.45
TUBA4A-201ENST00000248437 BCAR3O75815 825 aa24.12■■□□□ 1.45
TUBA4A-201ENST00000248437 NUTM2FA1L443 756 aa24.11■■□□□ 1.45
TUBA4A-201ENST00000248437 NALCNQ8IZF0 1738 aa24.1■■□□□ 1.45
TUBA4A-201ENST00000248437 USP6P35125 1406 aa24.09■■□□□ 1.45
TUBA4A-201ENST00000248437 PDE3AQ14432 1141 aa24.09■■□□□ 1.45
TUBA4A-201ENST00000248437 IL16Q14005 1332 aa24.09■■□□□ 1.45
TUBA4A-201ENST00000248437 ACEP12821 1306 aa24.08■■□□□ 1.45
TUBA4A-201ENST00000248437 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.45
TUBA4A-201ENST00000248437 TRIM35Q9UPQ4 493 aa24.08■■□□□ 1.44
TUBA4A-201ENST00000248437 PPM1GO15355 546 aaPredicted RBP24.07■■□□□ 1.44
TUBA4A-201ENST00000248437 ZRANB1Q9UGI0 708 aa24.07■■□□□ 1.44
TUBA4A-201ENST00000248437 TTC21BQ7Z4L5 1316 aa24.07■■□□□ 1.44
TUBA4A-201ENST00000248437 CT47B1P0C2W7 299 aaPredicted RBP24.06■■□□□ 1.44
TUBA4A-201ENST00000248437 FBLN1P23142 703 aa24.06■■□□□ 1.44
TUBA4A-201ENST00000248437 RSPH6AQ9H0K4 717 aa24.06■■□□□ 1.44
TUBA4A-201ENST00000248437 EMILIN1Q9Y6C2 1016 aa24.06■■□□□ 1.44
TUBA4A-201ENST00000248437 RGPD8O14715 1765 aaPredicted RBP24.06■■□□□ 1.44
TUBA4A-201ENST00000248437 OVOS2A0A0J9YW53 1432 aa24.06■■□□□ 1.44
TUBA4A-201ENST00000248437 OVOS2Q6IE36 1432 aa24.06■■□□□ 1.44
TUBA4A-201ENST00000248437 RARSP54136 660 aaKnown RBP24.06■■□□□ 1.44
TUBA4A-201ENST00000248437 SSH2Q76I76 1423 aa24.04■■□□□ 1.44
TUBA4A-201ENST00000248437 TCERG1O14776 1098 aaKnown RBP24.04■■□□□ 1.44
TUBA4A-201ENST00000248437 IL13P35225 146 aa24.04■■□□□ 1.44
TUBA4A-201ENST00000248437 KDM2BQ8NHM5 1336 aa24.04■■□□□ 1.44
TUBA4A-201ENST00000248437 NEFMP07197 916 aa24.03■■□□□ 1.44
TUBA4A-201ENST00000248437 RIPK4P57078 832 aa24.03■■□□□ 1.44
TUBA4A-201ENST00000248437 ANKARQ7Z5J8 1434 aa24.02■■□□□ 1.44
TUBA4A-201ENST00000248437 FMN2Q9NZ56 1722 aa24.02■■□□□ 1.44
TUBA4A-201ENST00000248437 PRKAR2BP31323 418 aa24.01■■□□□ 1.43
TUBA4A-201ENST00000248437 CENPQQ7L2Z9 268 aaPredicted RBP24.01■■□□□ 1.43
TUBA4A-201ENST00000248437 NWD1Q149M9 1564 aa24■■□□□ 1.43
TUBA4A-201ENST00000248437 TTC21AQ8NDW8 1320 aa24■■□□□ 1.43
TUBA4A-201ENST00000248437 CANXP27824 592 aaKnown RBP23.99■■□□□ 1.43
TUBA4A-201ENST00000248437 USP31Q70CQ4 1352 aa23.99■■□□□ 1.43
TUBA4A-201ENST00000248437 STRCQ7RTU9 1775 aa23.99■■□□□ 1.43
TUBA4A-201ENST00000248437 MS4A1P11836 297 aa23.98■■□□□ 1.43
TUBA4A-201ENST00000248437 RRS1Q15050 365 aaKnown RBP23.98■■□□□ 1.43
TUBA4A-201ENST00000248437 DLG5Q8TDM6 1919 aa23.97■■□□□ 1.43
TUBA4A-201ENST00000248437 NFE2L2Q16236 605 aa23.96■■□□□ 1.43
TUBA4A-201ENST00000248437 AAMPQ13685 434 aa23.96■■□□□ 1.43
TUBA4A-201ENST00000248437 STRCP1A6NGW2 1772 aa23.95■■□□□ 1.42
TUBA4A-201ENST00000248437 TSR2Q969E8 191 aaKnown RBP23.95■■□□□ 1.42
TUBA4A-201ENST00000248437 HMOX1P09601 288 aa23.94■■□□□ 1.42
TUBA4A-201ENST00000248437 PEAK1Q9H792 1746 aa23.94■■□□□ 1.42
TUBA4A-201ENST00000248437 ADGRL3Q9HAR2 1447 aa23.93■■□□□ 1.42
TUBA4A-201ENST00000248437 USP54Q70EL1 1684 aa23.93■■□□□ 1.42
TUBA4A-201ENST00000248437 PMFBP1Q8TBY8 1022 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms