RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ASXL1Q8IXJ9 1541 aa19.43■□□□□ 0.7
SIN3B-201ENST00000248054 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
SIN3B-201ENST00000248054 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
SIN3B-201ENST00000248054 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
SIN3B-201ENST00000248054 WWC1Q8IX03 1113 aa19.41■□□□□ 0.7
SIN3B-201ENST00000248054 C9orf78Q9NZ63 289 aaPredicted RBP19.41■□□□□ 0.7
SIN3B-201ENST00000248054 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
SIN3B-201ENST00000248054 SULT6B1Q6IMI4 303 aa19.41■□□□□ 0.7
SIN3B-201ENST00000248054 WAPLQ7Z5K2 1190 aa19.41■□□□□ 0.7
SIN3B-201ENST00000248054 HTATSF1O43719 755 aaKnown RBP19.4■□□□□ 0.7
SIN3B-201ENST00000248054 NFE2L2Q16236 605 aa19.4■□□□□ 0.7
SIN3B-201ENST00000248054 NUTM2GQ5VZR2 741 aa19.39■□□□□ 0.7
SIN3B-201ENST00000248054 NLRP2Q9NX02 1062 aa19.39■□□□□ 0.7
SIN3B-201ENST00000248054 REC8O95072 547 aa19.39■□□□□ 0.69
SIN3B-201ENST00000248054 KCNH5Q8NCM2 988 aa19.39■□□□□ 0.69
SIN3B-201ENST00000248054 TMPOP42166 694 aaKnown RBP19.38■□□□□ 0.69
SIN3B-201ENST00000248054 CHD1O14646 1710 aa19.38■□□□□ 0.69
SIN3B-201ENST00000248054 GNAI3P08754 354 aa19.38■□□□□ 0.69
SIN3B-201ENST00000248054 PARD3Q8TEW0 1356 aa19.38■□□□□ 0.69
SIN3B-201ENST00000248054 FRAT2O75474 233 aaPredicted RBP19.38■□□□□ 0.69
SIN3B-201ENST00000248054 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
SIN3B-201ENST00000248054 KIAA2012Q0VF49 1180 aa19.37■□□□□ 0.69
SIN3B-201ENST00000248054 ZMYND15Q9H091 742 aa19.37■□□□□ 0.69
SIN3B-201ENST00000248054 RIMS2Q9UQ26 1411 aa19.36■□□□□ 0.69
SIN3B-201ENST00000248054 PREX2Q70Z35 1606 aa19.36■□□□□ 0.69
SIN3B-201ENST00000248054 TESK2Q96S53 571 aa19.36■□□□□ 0.69
SIN3B-201ENST00000248054 ATP10AO60312 1499 aa19.36■□□□□ 0.69
SIN3B-201ENST00000248054 AMOTL2Q9Y2J4 779 aa19.35■□□□□ 0.69
SIN3B-201ENST00000248054 RUFY2Q8WXA3 655 aa19.35■□□□□ 0.69
SIN3B-201ENST00000248054 DDX11L8A8MPP1 907 aa19.35■□□□□ 0.69
SIN3B-201ENST00000248054 LRRFIP1Q32MZ4 808 aaKnown RBP19.35■□□□□ 0.69
SIN3B-201ENST00000248054 NKTRP30414 1462 aaKnown RBP19.34■□□□□ 0.69
SIN3B-201ENST00000248054 COL17A1Q9UMD9 1497 aaPredicted RBP19.34■□□□□ 0.69
SIN3B-201ENST00000248054 CSPP1Q1MSJ5 1256 aa19.34■□□□□ 0.69
SIN3B-201ENST00000248054 GCC1Q96CN9 775 aa19.34■□□□□ 0.69
SIN3B-201ENST00000248054 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
SIN3B-201ENST00000248054 CHMP4CQ96CF2 233 aa19.34■□□□□ 0.69
SIN3B-201ENST00000248054 SAMD9LQ8IVG5 1584 aa19.34■□□□□ 0.69
SIN3B-201ENST00000248054 BACH2Q9BYV9 841 aa19.33■□□□□ 0.69
SIN3B-201ENST00000248054 TSR2Q969E8 191 aaKnown RBP19.33■□□□□ 0.68
SIN3B-201ENST00000248054 ADCY10Q96PN6 1610 aa19.32■□□□□ 0.68
SIN3B-201ENST00000248054 BCAR3O75815 825 aa19.32■□□□□ 0.68
SIN3B-201ENST00000248054 AMER1Q5JTC6 1135 aaPredicted RBP19.32■□□□□ 0.68
SIN3B-201ENST00000248054 TATP17735 454 aaPredicted RBP19.32■□□□□ 0.68
SIN3B-201ENST00000248054 MVPQ14764 893 aaKnown RBP19.31■□□□□ 0.68
SIN3B-201ENST00000248054 NOB1Q9ULX3 412 aaKnown RBP19.31■□□□□ 0.68
SIN3B-201ENST00000248054 RRS1Q15050 365 aaKnown RBP19.31■□□□□ 0.68
SIN3B-201ENST00000248054 UBTFL1P0CB47 393 aaPredicted RBP19.31■□□□□ 0.68
SIN3B-201ENST00000248054 CCT4P50991 539 aaKnown RBP19.31■□□□□ 0.68
SIN3B-201ENST00000248054 INTS3Q68E01 1043 aaKnown RBP19.31■□□□□ 0.68
SIN3B-201ENST00000248054 TTC21BQ7Z4L5 1316 aa19.31■□□□□ 0.68
SIN3B-201ENST00000248054 RILPL2Q969X0 211 aa19.3■□□□□ 0.68
SIN3B-201ENST00000248054 TPRNQ4KMQ1 711 aa19.3■□□□□ 0.68
SIN3B-201ENST00000248054 IFT57Q9NWB7 429 aa19.3■□□□□ 0.68
SIN3B-201ENST00000248054 ABCC1P33527 1531 aa19.29■□□□□ 0.68
SIN3B-201ENST00000248054 G3BP1Q13283 466 aaKnown RBP eCLIP19.29■□□□□ 0.68
SIN3B-201ENST00000248054 ALDH1L2Q3SY69 923 aa19.29■□□□□ 0.68
SIN3B-201ENST00000248054 NECTIN2Q92692 538 aa19.29■□□□□ 0.68
SIN3B-201ENST00000248054 NPC1L1Q9UHC9 1359 aa19.29■□□□□ 0.68
SIN3B-201ENST00000248054 RRP9O43818 475 aaKnown RBP19.29■□□□□ 0.68
SIN3B-201ENST00000248054 IFIT2P09913 472 aaKnown RBP19.29■□□□□ 0.68
SIN3B-201ENST00000248054 PIK3C2GO75747 1445 aa19.29■□□□□ 0.68
SIN3B-201ENST00000248054 SKOR2Q2VWA4 1001 aaPredicted RBP19.29■□□□□ 0.68
SIN3B-201ENST00000248054 DRC7Q8IY82 874 aa19.28■□□□□ 0.68
SIN3B-201ENST00000248054 DIAPH3Q9NSV4 1193 aa19.28■□□□□ 0.68
SIN3B-201ENST00000248054 KIF3AQ9Y496 699 aa19.28■□□□□ 0.68
SIN3B-201ENST00000248054 KDM5DQ9BY66 1539 aa19.28■□□□□ 0.68
SIN3B-201ENST00000248054 ERC2O15083 957 aa19.28■□□□□ 0.68
SIN3B-201ENST00000248054 SPG7Q9UQ90 795 aa19.28■□□□□ 0.68
SIN3B-201ENST00000248054 PHF14O94880 888 aa19.28■□□□□ 0.68
SIN3B-201ENST00000248054 POLR3AO14802 1390 aaPredicted RBP19.27■□□□□ 0.68
SIN3B-201ENST00000248054 IL16Q14005 1332 aa19.27■□□□□ 0.68
SIN3B-201ENST00000248054 NME9Q86XW9 330 aa19.27■□□□□ 0.68
SIN3B-201ENST00000248054 LNPKQ9C0E8 428 aa19.27■□□□□ 0.68
SIN3B-201ENST00000248054 ZCCHC11Q5TAX3 1644 aaKnown RBP19.27■□□□□ 0.68
SIN3B-201ENST00000248054 PHF8Q9UPP1 1060 aa19.27■□□□□ 0.68
SIN3B-201ENST00000248054 TMX4Q9H1E5 349 aaPredicted RBP19.27■□□□□ 0.67
SIN3B-201ENST00000248054 RIC3Q7Z5B4 369 aa19.26■□□□□ 0.67
SIN3B-201ENST00000248054 TTC37Q6PGP7 1564 aa19.26■□□□□ 0.67
SIN3B-201ENST00000248054 ZNF530Q6P9A1 599 aaPredicted RBP19.26■□□□□ 0.67
SIN3B-201ENST00000248054 ARAP3Q8WWN8 1544 aa19.26■□□□□ 0.67
SIN3B-201ENST00000248054 TTC21AQ8NDW8 1320 aa19.26■□□□□ 0.67
SIN3B-201ENST00000248054 CDC45O75419 566 aa19.26■□□□□ 0.67
SIN3B-201ENST00000248054 CEBPAP49715 358 aaPredicted RBP19.25■□□□□ 0.67
SIN3B-201ENST00000248054 GTF2E1P29083 439 aaPredicted RBP19.24■□□□□ 0.67
SIN3B-201ENST00000248054 HDGFL1Q5TGJ6 251 aa19.24■□□□□ 0.67
SIN3B-201ENST00000248054 GNAI2P04899 355 aa19.24■□□□□ 0.67
SIN3B-201ENST00000248054 PDZRN3Q9UPQ7 1066 aa19.24■□□□□ 0.67
SIN3B-201ENST00000248054 SLC4A2P04920 1241 aa19.24■□□□□ 0.67
SIN3B-201ENST00000248054 GNAT3A8MTJ3 354 aa19.23■□□□□ 0.67
SIN3B-201ENST00000248054 ZMYM3Q14202 1370 aa19.23■□□□□ 0.67
SIN3B-201ENST00000248054 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
SIN3B-201ENST00000248054 DUSP27Q5VZP5 1158 aa19.22■□□□□ 0.67
SIN3B-201ENST00000248054 GNL2Q13823 731 aaKnown RBP19.22■□□□□ 0.67
SIN3B-201ENST00000248054 ZFYVE16Q7Z3T8 1539 aa19.21■□□□□ 0.67
SIN3B-201ENST00000248054 MLH3Q9UHC1 1453 aa19.21■□□□□ 0.67
SIN3B-201ENST00000248054 YTHDC2Q9H6S0 1430 aaKnown RBP19.21■□□□□ 0.67
SIN3B-201ENST00000248054 LRPPRCP42704 1394 aaKnown RBP19.21■□□□□ 0.67
SIN3B-201ENST00000248054 ZKSCAN1P17029 563 aaPredicted RBP19.21■□□□□ 0.67
SIN3B-201ENST00000248054 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms