RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 SLC3A2P08195 630 aaKnown RBP8.04□□□□□ -1.12
CSMD2-201ENST00000241312 ZFYVE27Q5T4F4 411 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 MPNDQ8N594 471 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 PANK1Q8TE04 598 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 FYCO1Q9BQS8 1478 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 RRP9O43818 475 aaKnown RBP8.03□□□□□ -1.12
CSMD2-201ENST00000241312 TRAK2O60296 914 aa8.03□□□□□ -1.12
CSMD2-201ENST00000241312 MINK1Q8N4C8 1332 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-201ENST00000241312 RBM33Q96EV2 1170 aaKnown RBP8.03□□□□□ -1.12
CSMD2-201ENST00000241312 TSPYL4Q9UJ04 414 aa8.03□□□□□ -1.12
CSMD2-201ENST00000241312 TBC1D2BQ9UPU7 963 aa8.03□□□□□ -1.12
CSMD2-201ENST00000241312 FIBPO43427 364 aa8.03□□□□□ -1.12
CSMD2-201ENST00000241312 KIF21BO75037 1637 aa8.03□□□□□ -1.12
CSMD2-201ENST00000241312 TTLL5Q6EMB2 1281 aa8.02□□□□□ -1.12
CSMD2-201ENST00000241312 STK38Q15208 465 aa8.02□□□□□ -1.13
CSMD2-201ENST00000241312 PPFIBP1Q86W92 1011 aa8.02□□□□□ -1.13
CSMD2-201ENST00000241312 GNAI3P08754 354 aa8.02□□□□□ -1.13
CSMD2-201ENST00000241312 CCAR1Q8IX12 1150 aaKnown RBP8.02□□□□□ -1.13
CSMD2-201ENST00000241312 ERC1Q8IUD2 1116 aa8.02□□□□□ -1.13
CSMD2-201ENST00000241312 CWC22Q9HCG8 908 aaKnown RBP8.02□□□□□ -1.13
CSMD2-201ENST00000241312 SUPT6HQ7KZ85 1726 aaKnown RBP8.02□□□□□ -1.13
CSMD2-201ENST00000241312 ENOX2Q16206 610 aaKnown RBP8.02□□□□□ -1.13
CSMD2-201ENST00000241312 WASHC4Q2M389 1173 aa8.02□□□□□ -1.13
CSMD2-201ENST00000241312 HSP90AB3PQ58FF7 597 aa8.02□□□□□ -1.13
CSMD2-201ENST00000241312 CBFA2T2O43439 604 aa8.02□□□□□ -1.13
CSMD2-201ENST00000241312 SYCP1Q15431 976 aa8.02□□□□□ -1.13
CSMD2-201ENST00000241312 AEBP1Q8IUX7 1158 aa8.01□□□□□ -1.13
CSMD2-201ENST00000241312 DACH1Q9UI36 760 aa8.01□□□□□ -1.13
CSMD2-201ENST00000241312 TNMDQ9H2S6 317 aa8.01□□□□□ -1.13
CSMD2-201ENST00000241312 MAPK8IP2Q13387 824 aaPredicted RBP8.01□□□□□ -1.13
CSMD2-201ENST00000241312 WDR33Q9C0J8 1336 aaKnown RBP8.01□□□□□ -1.13
CSMD2-201ENST00000241312 NEK4P51957 841 aa8.01□□□□□ -1.13
CSMD2-201ENST00000241312 ANKRD1Q15327 319 aa8.01□□□□□ -1.13
CSMD2-201ENST00000241312 KIF2AO00139 706 aaPredicted RBP8.01□□□□□ -1.13
CSMD2-201ENST00000241312 CEP57L1Q8IYX8 460 aa8.01□□□□□ -1.13
CSMD2-201ENST00000241312 SMG6Q86US8 1419 aaKnown RBP8.01□□□□□ -1.13
CSMD2-201ENST00000241312 EVA1CP58658 441 aa8.01□□□□□ -1.13
CSMD2-201ENST00000241312 CCDC27Q2M243 656 aa8.01□□□□□ -1.13
CSMD2-201ENST00000241312 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
CSMD2-201ENST00000241312 PDIA4P13667 645 aaKnown RBP8□□□□□ -1.13
CSMD2-201ENST00000241312 CLASRPQ8N2M8 674 aaKnown RBP8□□□□□ -1.13
CSMD2-201ENST00000241312 TRIM22Q8IYM9 498 aa8□□□□□ -1.13
CSMD2-201ENST00000241312 SEPT7Q16181 437 aaKnown RBP8□□□□□ -1.13
CSMD2-201ENST00000241312 CIZ1Q9ULV3 898 aaPredicted RBP8□□□□□ -1.13
CSMD2-201ENST00000241312 SERPINC1P01008 464 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 UQCRHLA0A096LP55 91 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 UQCRHP07919 91 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 ME1P48163 572 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 KRT18P05783 430 aaKnown RBP7.99□□□□□ -1.13
CSMD2-201ENST00000241312 DEF6Q9H4E7 631 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 GNL3LQ9NVN8 582 aaKnown RBP7.99□□□□□ -1.13
CSMD2-201ENST00000241312 FMNL2Q96PY5 1086 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 CDKL5O76039 1030 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 SYTL4Q96C24 671 aaPredicted RBP7.99□□□□□ -1.13
CSMD2-201ENST00000241312 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.99□□□□□ -1.13
CSMD2-201ENST00000241312 CCDC181Q5TID7 509 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 SKIDA1Q1XH10 827 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 PDE3AQ14432 1141 aa7.99□□□□□ -1.13
CSMD2-201ENST00000241312 PRPF40AO75400 957 aaKnown RBP7.98□□□□□ -1.13
CSMD2-201ENST00000241312 GCC1Q96CN9 775 aa7.98□□□□□ -1.13
CSMD2-201ENST00000241312 LRRCC1Q9C099 1032 aa7.98□□□□□ -1.13
CSMD2-201ENST00000241312 CENPHQ9H3R5 247 aa7.98□□□□□ -1.13
CSMD2-201ENST00000241312 CYP46A1Q9Y6A2 500 aa7.98□□□□□ -1.13
CSMD2-201ENST00000241312 RIC3Q7Z5B4 369 aa7.98□□□□□ -1.13
CSMD2-201ENST00000241312 KRT85P78386 507 aa7.98□□□□□ -1.13
CSMD2-201ENST00000241312 GRPEL1Q9HAV7 217 aa7.98□□□□□ -1.13
CSMD2-201ENST00000241312 GBP2P32456 591 aaPredicted RBP7.98□□□□□ -1.13
CSMD2-201ENST00000241312 DHX37Q8IY37 1157 aaKnown RBP7.98□□□□□ -1.13
CSMD2-201ENST00000241312 SPC24Q8NBT2 197 aa7.98□□□□□ -1.13
CSMD2-201ENST00000241312 PLCD4Q9BRC7 762 aa7.98□□□□□ -1.13
CSMD2-201ENST00000241312 CADPSQ9ULU8 1353 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 RAPGEF4Q8WZA2 1011 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 ERICH3Q5RHP9 1530 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 CCDC30Q5VVM6 783 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 ZNF428Q96B54 188 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 PTPRGP23470 1445 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 PSME1Q06323 249 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 TMEM132AQ24JP5 1023 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 SLC26A8Q96RN1 970 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 ANKRD50Q9ULJ7 1429 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 DYDC1Q8WWB3 177 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 BRPF1P55201 1214 aaPredicted RBP7.97□□□□□ -1.13
CSMD2-201ENST00000241312 PDCL2Q8N4E4 241 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 PLEKHH2Q8IVE3 1493 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 ARHGAP5Q13017 1502 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 MSH5O43196 834 aa7.97□□□□□ -1.13
CSMD2-201ENST00000241312 POLA1P09884 1462 aaPredicted RBP7.97□□□□□ -1.13
CSMD2-201ENST00000241312 HECW1Q76N89 1606 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 MAP9Q49MG5 647 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 GAS2L2Q8NHY3 880 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 HMOX1P09601 288 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 PAF1Q8N7H5 531 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 SRCIN1Q9C0H9 1055 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 ESPNB1AK53 854 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 FYB1O15117 783 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 NEFHP12036 1026 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 NACAP1Q9BZK3 213 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 EHBP1L1Q8N3D4 1523 aa7.96□□□□□ -1.13
CSMD2-201ENST00000241312 PODXL2Q9NZ53 605 aa7.96□□□□□ -1.14
CSMD2-201ENST00000241312 K7ELQ4 463 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms