RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 ZNF428Q96B54 188 aa11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 HSP90B2PQ58FF3 399 aa11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 SSH1Q8WYL5 1049 aa11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 CHMP4CQ96CF2 233 aa11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 NOL7Q9UMY1 257 aaKnown RBP11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 CCDC183Q5T5S1 534 aa11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 NAT10Q9H0A0 1025 aaKnown RBP11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 NOLC1Q14978 699 aaKnown RBP eCLIP11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 CFAP70Q5T0N1 1121 aa11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 RNF20Q5VTR2 975 aa11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 GGNBP2Q9H3C7 697 aa11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 UVSSAQ2YD98 709 aa11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 TBC1D9Q6ZT07 1266 aa11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 ACBD3Q9H3P7 528 aa11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 AK7Q96M32 723 aa11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 RALGAPBQ86X10 1494 aa11.42□□□□□ -0.58
NUDCD1-201ENST00000239690 EPRSP07814 1512 aaKnown RBP11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 FSD2A1L4K1 749 aa11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 TNMDQ9H2S6 317 aa11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 ADCY5O95622 1261 aa11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 TRIM27P14373 513 aa11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 TWISTNBQ3B726 338 aaPredicted RBP11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 KIF20AO95235 890 aa11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 KRT85P78386 507 aa11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 BIVM-ERCC5R4GMW8 1640 aa11.41□□□□□ -0.58
NUDCD1-201ENST00000239690 LEKR1Q6ZMV7 388 aa11.4□□□□□ -0.58
NUDCD1-201ENST00000239690 SLC12A5Q9H2X9 1139 aa11.4□□□□□ -0.58
NUDCD1-201ENST00000239690 GORABQ5T7V8 394 aa11.4□□□□□ -0.58
NUDCD1-201ENST00000239690 NUTM2DQ5VT03 806 aaPredicted RBP11.4□□□□□ -0.58
NUDCD1-201ENST00000239690 AEBP1Q8IUX7 1158 aa11.4□□□□□ -0.58
NUDCD1-201ENST00000239690 CCP110O43303 1012 aa11.4□□□□□ -0.58
NUDCD1-201ENST00000239690 APPP05067 770 aa11.4□□□□□ -0.58
NUDCD1-201ENST00000239690 HMOX1P09601 288 aa11.4□□□□□ -0.58
NUDCD1-201ENST00000239690 TROQ12816 1431 aaPredicted RBP11.4□□□□□ -0.58
NUDCD1-201ENST00000239690 RBM25P49756 843 aaKnown RBP11.4□□□□□ -0.59
NUDCD1-201ENST00000239690 NUP62CLQ9H1M0 184 aa11.4□□□□□ -0.59
NUDCD1-201ENST00000239690 FBXW7Q969H0 707 aa11.39□□□□□ -0.59
NUDCD1-201ENST00000239690 SDF4Q9BRK5 362 aa11.39□□□□□ -0.59
NUDCD1-201ENST00000239690 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
NUDCD1-201ENST00000239690 TNNT1P13805 278 aa11.39□□□□□ -0.59
NUDCD1-201ENST00000239690 PRKAR2BP31323 418 aa11.39□□□□□ -0.59
NUDCD1-201ENST00000239690 FKBP5Q13451 457 aaPredicted RBP11.39□□□□□ -0.59
NUDCD1-201ENST00000239690 NOC3LQ8WTT2 800 aaKnown RBP11.39□□□□□ -0.59
NUDCD1-201ENST00000239690 TIGD1Q96MW7 591 aa11.39□□□□□ -0.59
NUDCD1-201ENST00000239690 DISP3Q9P2K9 1392 aa11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 KINO60870 393 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 KIF2AO00139 706 aaPredicted RBP11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 TPM1P09493 284 aa11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 TMPOP42166 694 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 DHX8Q14562 1220 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 PTPN14Q15678 1187 aa11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 MAP3K11Q16584 847 aa11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 GAS2L2Q8NHY3 880 aa11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 C16orf45Q96MC5 204 aaPredicted RBP11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 RPAP2Q8IXW5 612 aaPredicted RBP11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 CDK13Q14004 1512 aaKnown RBP11.38□□□□□ -0.59
NUDCD1-201ENST00000239690 GNAI3P08754 354 aa11.37□□□□□ -0.59
NUDCD1-201ENST00000239690 NUCB1Q02818 461 aa11.37□□□□□ -0.59
NUDCD1-201ENST00000239690 ALDH1L2Q3SY69 923 aa11.37□□□□□ -0.59
NUDCD1-201ENST00000239690 HSP90AB4PQ58FF6 505 aa11.37□□□□□ -0.59
NUDCD1-201ENST00000239690 FILIP1Q7Z7B0 1213 aa11.37□□□□□ -0.59
NUDCD1-201ENST00000239690 CNTROBQ8N137 903 aa11.37□□□□□ -0.59
NUDCD1-201ENST00000239690 ZNF830Q96NB3 372 aaPredicted RBP11.37□□□□□ -0.59
NUDCD1-201ENST00000239690 PRG4Q92954 1404 aaPredicted RBP11.37□□□□□ -0.59
NUDCD1-201ENST00000239690 MINK1Q8N4C8 1332 aaPredicted RBP11.37□□□□□ -0.59
NUDCD1-201ENST00000239690 IFIT2P09913 472 aaKnown RBP11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 PSMA5P28066 241 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 KIF18AQ8NI77 898 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 COG3Q96JB2 828 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 SMC2O95347 1197 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 CCDC70Q6NSX1 233 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 UBXN4Q92575 508 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 PPP1R9BQ96SB3 815 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 KRT222Q8N1A0 295 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 TTC12Q9H892 705 aaPredicted RBP11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 GDPD2Q9HCC8 539 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 PEG3Q9GZU2 1588 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 HCLS1P14317 486 aaPredicted RBP11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 ZNF445P59923 1031 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 UPF3BQ9BZI7 483 aaKnown RBP11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 INSRP06213 1382 aa11.36□□□□□ -0.59
NUDCD1-201ENST00000239690 TMCO3Q6UWJ1 677 aa11.35□□□□□ -0.59
NUDCD1-201ENST00000239690 RBSNQ9H1K0 784 aa11.35□□□□□ -0.59
NUDCD1-201ENST00000239690 ABCC11Q96J66 1382 aa11.35□□□□□ -0.59
NUDCD1-201ENST00000239690 RLBP1P12271 317 aa11.35□□□□□ -0.59
NUDCD1-201ENST00000239690 LARP1BQ659C4 914 aaKnown RBP11.35□□□□□ -0.59
NUDCD1-201ENST00000239690 FEZ1Q99689 392 aa11.35□□□□□ -0.59
NUDCD1-201ENST00000239690 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.35□□□□□ -0.59
NUDCD1-201ENST00000239690 PDIA4P13667 645 aaKnown RBP11.34□□□□□ -0.59
NUDCD1-201ENST00000239690 TRERF1Q96PN7 1200 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms