RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 KINO60870 393 aaKnown RBP10.35□□□□□ -0.75
YIPF4-201ENST00000238831 ZNHIT6Q9NWK9 470 aaKnown RBP10.35□□□□□ -0.75
YIPF4-201ENST00000238831 TRIM5Q9C035 493 aa10.34□□□□□ -0.75
YIPF4-201ENST00000238831 EZRP15311 586 aaKnown RBP10.34□□□□□ -0.75
YIPF4-201ENST00000238831 SSBP05455 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
YIPF4-201ENST00000238831 DESP17661 470 aa10.34□□□□□ -0.75
YIPF4-201ENST00000238831 ZNF76P36508 570 aa10.33□□□□□ -0.76
YIPF4-201ENST00000238831 KANK4Q5T7N3 995 aaPredicted RBP10.33□□□□□ -0.76
YIPF4-201ENST00000238831 RNF214Q8ND24 703 aa10.33□□□□□ -0.76
YIPF4-201ENST00000238831 CWC15Q9P013 229 aaKnown RBP10.33□□□□□ -0.76
YIPF4-201ENST00000238831 HMGN5P82970 282 aaKnown RBP10.33□□□□□ -0.76
YIPF4-201ENST00000238831 CCDC181Q5TID7 509 aa10.33□□□□□ -0.76
YIPF4-201ENST00000238831 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.33□□□□□ -0.76
YIPF4-201ENST00000238831 NUCB2P80303 420 aa10.33□□□□□ -0.76
YIPF4-201ENST00000238831 PIBF1Q8WXW3 757 aa10.33□□□□□ -0.76
YIPF4-201ENST00000238831 ERC1Q8IUD2 1116 aa10.33□□□□□ -0.76
YIPF4-201ENST00000238831 RRP1P56182 461 aaKnown RBP10.33□□□□□ -0.76
YIPF4-201ENST00000238831 NUP133Q8WUM0 1156 aa10.33□□□□□ -0.76
YIPF4-201ENST00000238831 FMN1Q68DA7 1419 aa10.33□□□□□ -0.76
YIPF4-201ENST00000238831 ABTB2Q8N961 1025 aa10.32□□□□□ -0.76
YIPF4-201ENST00000238831 CCDC18Q5T9S5 1454 aa10.32□□□□□ -0.76
YIPF4-201ENST00000238831 TRIM21P19474 475 aaKnown RBP10.32□□□□□ -0.76
YIPF4-201ENST00000238831 SOGA1O94964 1423 aa10.32□□□□□ -0.76
YIPF4-201ENST00000238831 STIM1Q13586 685 aa10.32□□□□□ -0.76
YIPF4-201ENST00000238831 SCLT1Q96NL6 688 aa10.32□□□□□ -0.76
YIPF4-201ENST00000238831 DDX54Q8TDD1 881 aaKnown RBP10.32□□□□□ -0.76
YIPF4-201ENST00000238831 ESCO1Q5FWF5 840 aa10.32□□□□□ -0.76
YIPF4-201ENST00000238831 SOGA3Q5TF21 947 aa10.32□□□□□ -0.76
YIPF4-201ENST00000238831 PSMD1Q99460 953 aa10.32□□□□□ -0.76
YIPF4-201ENST00000238831 SPC24Q8NBT2 197 aa10.31□□□□□ -0.76
YIPF4-201ENST00000238831 CCDC69A6NI79 296 aa10.31□□□□□ -0.76
YIPF4-201ENST00000238831 CCDC158Q5M9N0 1113 aa10.31□□□□□ -0.76
YIPF4-201ENST00000238831 STK3Q13188 491 aa10.31□□□□□ -0.76
YIPF4-201ENST00000238831 FAM193AP78312 1265 aa10.31□□□□□ -0.76
YIPF4-201ENST00000238831 SPINK5Q9NQ38 1064 aaPredicted RBP10.31□□□□□ -0.76
YIPF4-201ENST00000238831 NLRP6P59044 892 aa10.31□□□□□ -0.76
YIPF4-201ENST00000238831 TDRD9Q8NDG6 1382 aaKnown RBP10.31□□□□□ -0.76
YIPF4-201ENST00000238831 SERPINC1P01008 464 aa10.31□□□□□ -0.76
YIPF4-201ENST00000238831 CLASRPQ8N2M8 674 aaKnown RBP10.31□□□□□ -0.76
YIPF4-201ENST00000238831 USP5P45974 858 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 STK38Q15208 465 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 SURF6O75683 361 aaKnown RBP10.3□□□□□ -0.76
YIPF4-201ENST00000238831 FAM177A1Q8N128 213 aaPredicted RBP10.3□□□□□ -0.76
YIPF4-201ENST00000238831 LUC7LQ9NQ29 371 aaKnown RBP10.3□□□□□ -0.76
YIPF4-201ENST00000238831 PLCD3Q8N3E9 789 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 CCDC112Q8NEF3 446 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.76
YIPF4-201ENST00000238831 TTLL12Q14166 644 aaPredicted RBP10.3□□□□□ -0.76
YIPF4-201ENST00000238831 LEKR1Q6ZMV7 388 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 SIL1Q9H173 461 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 ANAPC15P60006 121 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 FAM43AQ8N2R8 423 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 GNAI1P63096 354 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 PPFIBP1Q86W92 1011 aa10.3□□□□□ -0.76
YIPF4-201ENST00000238831 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
YIPF4-201ENST00000238831 ZNF396Q96N95 335 aaPredicted RBP10.29□□□□□ -0.76
YIPF4-201ENST00000238831 MPHOSPH8Q99549 860 aa10.29□□□□□ -0.76
YIPF4-201ENST00000238831 BICDL1Q6ZP65 573 aa10.29□□□□□ -0.76
YIPF4-201ENST00000238831 C22orf23Q9BZE7 217 aa10.29□□□□□ -0.76
YIPF4-201ENST00000238831 MAP4K4O95819 1239 aaPredicted RBP10.29□□□□□ -0.76
YIPF4-201ENST00000238831 CCDC39Q9UFE4 941 aa10.29□□□□□ -0.76
YIPF4-201ENST00000238831 RUNDC1Q96C34 613 aa10.29□□□□□ -0.76
YIPF4-201ENST00000238831 MYL6BP14649 208 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 NASPP49321 788 aaPredicted RBP10.28□□□□□ -0.76
YIPF4-201ENST00000238831 CABP4P57796 275 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 GPRASP1Q5JY77 1395 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 WDR78Q5VTH9 848 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 KIAA0754O94854 1291 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 CCDC30Q5VVM6 783 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 SMG6Q86US8 1419 aaKnown RBP10.28□□□□□ -0.76
YIPF4-201ENST00000238831 FAM69CQ0P6D2 419 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 TOM1L2Q6ZVM7 507 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 TRIM22Q8IYM9 498 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
YIPF4-201ENST00000238831 LRRFIP2Q9Y608 721 aaKnown RBP10.28□□□□□ -0.76
YIPF4-201ENST00000238831 CABP2Q9NPB3 220 aa10.27□□□□□ -0.76
YIPF4-201ENST00000238831 PIP4K2AP48426 406 aaPredicted RBP10.27□□□□□ -0.76
YIPF4-201ENST00000238831 NACAP1Q9BZK3 213 aa10.27□□□□□ -0.76
YIPF4-201ENST00000238831 PDS5BQ9NTI5 1447 aa10.27□□□□□ -0.76
YIPF4-201ENST00000238831 CA8P35219 290 aa10.27□□□□□ -0.76
YIPF4-201ENST00000238831 FKBP4Q02790 459 aaKnown RBP eCLIP10.27□□□□□ -0.76
YIPF4-201ENST00000238831 TAF3Q5VWG9 929 aa10.27□□□□□ -0.76
YIPF4-201ENST00000238831 GOLGA6L7A0A1B0GV03 622 aa10.27□□□□□ -0.77
YIPF4-201ENST00000238831 CCP110O43303 1012 aa10.27□□□□□ -0.77
YIPF4-201ENST00000238831 CAVIN1Q6NZI2 390 aaKnown RBP10.27□□□□□ -0.77
YIPF4-201ENST00000238831 FIBPO43427 364 aa10.27□□□□□ -0.77
YIPF4-201ENST00000238831 CDC45O75419 566 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 GGNBP2Q9H3C7 697 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 TTC16Q8NEE8 873 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 PANK1Q8TE04 598 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 DRC1Q96MC2 740 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 ABCC8Q09428 1581 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 MIA2Q96PC5 1412 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 WDHD1O75717 1129 aaPredicted RBP10.26□□□□□ -0.77
YIPF4-201ENST00000238831 HIP1O00291 1037 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 PLEKHO1Q53GL0 409 aaPredicted RBP10.26□□□□□ -0.77
YIPF4-201ENST00000238831 TDO2P48775 406 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 NFKBIBQ15653 356 aa10.26□□□□□ -0.77
YIPF4-201ENST00000238831 BMP2KQ9NSY1 1161 aaPredicted RBP10.26□□□□□ -0.77
YIPF4-201ENST00000238831 LETM1O95202 739 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms