RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 RBM6P78332 1123 aaKnown RBP21.8■■□□□ 1.08
APOA1-201ENST00000236850 ALS2Q96Q42 1657 aa21.79■■□□□ 1.08
APOA1-201ENST00000236850 SLC24A1O60721 1099 aa21.79■■□□□ 1.08
APOA1-201ENST00000236850 BRD4O60885 1362 aaPredicted RBP21.78■■□□□ 1.08
APOA1-201ENST00000236850 CABLES1Q8TDN4 633 aa21.78■■□□□ 1.08
APOA1-201ENST00000236850 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.08
APOA1-201ENST00000236850 ATAD2Q6PL18 1390 aa21.76■■□□□ 1.07
APOA1-201ENST00000236850 CABP1Q9NZU7 370 aa21.76■■□□□ 1.07
APOA1-201ENST00000236850 PLEKHG5O94827 1062 aa21.75■■□□□ 1.07
APOA1-201ENST00000236850 ABCA3Q99758 1704 aa21.74■■□□□ 1.07
APOA1-201ENST00000236850 UNC5CLQ8IV45 518 aa21.73■■□□□ 1.07
APOA1-201ENST00000236850 ZNF692Q9BU19 519 aaPredicted RBP21.73■■□□□ 1.07
APOA1-201ENST00000236850 BCL9LQ86UU0 1499 aa21.72■■□□□ 1.07
APOA1-201ENST00000236850 ABTB2Q8N961 1025 aa21.72■■□□□ 1.07
APOA1-201ENST00000236850 ATRNO75882 1429 aa21.72■■□□□ 1.07
APOA1-201ENST00000236850 SLIT2O94813 1529 aa21.71■■□□□ 1.07
APOA1-201ENST00000236850 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.71■■□□□ 1.07
APOA1-201ENST00000236850 PUS7Q96PZ0 661 aaKnown RBP21.7■■□□□ 1.06
APOA1-201ENST00000236850 NWD2Q9ULI1 1742 aa21.69■■□□□ 1.06
APOA1-201ENST00000236850 NLRP13Q86W25 1043 aa21.69■■□□□ 1.06
APOA1-201ENST00000236850 USP6P35125 1406 aa21.68■■□□□ 1.06
APOA1-201ENST00000236850 ST20-MTHFSA0A0A6YYL1 179 aa21.67■■□□□ 1.06
APOA1-201ENST00000236850 FAM83GA6ND36 823 aa21.67■■□□□ 1.06
APOA1-201ENST00000236850 GJD4Q96KN9 370 aaPredicted RBP21.67■■□□□ 1.06
APOA1-201ENST00000236850 PRDM11Q9NQV5 511 aa21.66■■□□□ 1.06
APOA1-201ENST00000236850 PLCH1Q4KWH8 1693 aa21.66■■□□□ 1.06
APOA1-201ENST00000236850 NUTM2GQ5VZR2 741 aa21.65■■□□□ 1.06
APOA1-201ENST00000236850 COL14A1Q05707 1796 aaKnown RBP21.65■■□□□ 1.06
APOA1-201ENST00000236850 CRYBG1Q9Y4K1 1723 aa21.65■■□□□ 1.06
APOA1-201ENST00000236850 VPS72Q15906 364 aa21.64■■□□□ 1.05
APOA1-201ENST00000236850 UPF1Q92900 1129 aaKnown RBP eCLIP21.63■■□□□ 1.05
APOA1-201ENST00000236850 AKAP12Q02952 1782 aa21.63■■□□□ 1.05
APOA1-201ENST00000236850 RGS12O14924 1447 aa21.63■■□□□ 1.05
APOA1-201ENST00000236850 USP47Q96K76 1375 aa21.62■■□□□ 1.05
APOA1-201ENST00000236850 USP19O94966 1318 aa21.62■■□□□ 1.05
APOA1-201ENST00000236850 TTC21AQ8NDW8 1320 aa21.62■■□□□ 1.05
APOA1-201ENST00000236850 NLRP6P59044 892 aa21.62■■□□□ 1.05
APOA1-201ENST00000236850 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
APOA1-201ENST00000236850 TESK2Q96S53 571 aa21.62■■□□□ 1.05
APOA1-201ENST00000236850 BTG4Q9NY30 223 aa21.62■■□□□ 1.05
APOA1-201ENST00000236850 CCDC9Q9Y3X0 531 aaKnown RBP21.62■■□□□ 1.05
APOA1-201ENST00000236850 PHRF1Q9P1Y6 1649 aaKnown RBP21.62■■□□□ 1.05
APOA1-201ENST00000236850 KTN1Q86UP2 1357 aaKnown RBP21.61■■□□□ 1.05
APOA1-201ENST00000236850 HDGFL2Q7Z4V5 671 aaPredicted RBP21.61■■□□□ 1.05
APOA1-201ENST00000236850 TERF2IPQ9NYB0 399 aa21.61■■□□□ 1.05
APOA1-201ENST00000236850 CPSF1Q10570 1443 aaKnown RBP21.61■■□□□ 1.05
APOA1-201ENST00000236850 TMF1P82094 1093 aa21.6■■□□□ 1.05
APOA1-201ENST00000236850 SSH2Q76I76 1423 aa21.6■■□□□ 1.05
APOA1-201ENST00000236850 KIAA0232Q92628 1395 aa21.6■■□□□ 1.05
APOA1-201ENST00000236850 NINLQ9Y2I6 1382 aa21.6■■□□□ 1.05
APOA1-201ENST00000236850 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
APOA1-201ENST00000236850 ZC3H6P61129 1189 aaKnown RBP21.59■■□□□ 1.05
APOA1-201ENST00000236850 CDCA8Q53HL2 280 aa21.59■■□□□ 1.05
APOA1-201ENST00000236850 GCP02774 474 aa21.58■■□□□ 1.05
APOA1-201ENST00000236850 CPDO75976 1380 aa21.58■■□□□ 1.04
APOA1-201ENST00000236850 NRAPQ86VF7 1730 aa21.55■■□□□ 1.04
APOA1-201ENST00000236850 KCNH5Q8NCM2 988 aa21.55■■□□□ 1.04
APOA1-201ENST00000236850 SLC12A5Q9H2X9 1139 aa21.55■■□□□ 1.04
APOA1-201ENST00000236850 GLI3P10071 1580 aa21.55■■□□□ 1.04
APOA1-201ENST00000236850 NRKQ7Z2Y5 1582 aa21.55■■□□□ 1.04
APOA1-201ENST00000236850 MON2Q7Z3U7 1717 aa21.55■■□□□ 1.04
APOA1-201ENST00000236850 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
APOA1-201ENST00000236850 CHRNA2Q15822 529 aa21.54■■□□□ 1.04
APOA1-201ENST00000236850 ONECUT3O60422 494 aaPredicted RBP21.53■■□□□ 1.04
APOA1-201ENST00000236850 EVA1CP58658 441 aa21.53■■□□□ 1.04
APOA1-201ENST00000236850 PIK3C2AO00443 1686 aa21.53■■□□□ 1.04
APOA1-201ENST00000236850 SLIT3O75094 1523 aa21.51■■□□□ 1.03
APOA1-201ENST00000236850 EDC4Q6P2E9 1401 aaKnown RBP21.51■■□□□ 1.03
APOA1-201ENST00000236850 SPATA31A5Q5VU36 1347 aa21.51■■□□□ 1.03
APOA1-201ENST00000236850 SPATA31A7Q8IWB4 1347 aa21.51■■□□□ 1.03
APOA1-201ENST00000236850 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.5■■□□□ 1.03
APOA1-201ENST00000236850 SEPT12Q8IYM1 358 aa21.5■■□□□ 1.03
APOA1-201ENST00000236850 CD163L1Q9NR16 1453 aa21.5■■□□□ 1.03
APOA1-201ENST00000236850 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
APOA1-201ENST00000236850 A0A1W2PP64 1363 aa21.48■■□□□ 1.03
APOA1-201ENST00000236850 A0A0G2JS52 829 aa21.48■■□□□ 1.03
APOA1-201ENST00000236850 MYT1Q01538 1121 aa21.48■■□□□ 1.03
APOA1-201ENST00000236850 AATKQ6ZMQ8 1374 aa21.48■■□□□ 1.03
APOA1-201ENST00000236850 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
APOA1-201ENST00000236850 EIF4G2P78344 907 aaKnown RBP eCLIP21.47■■□□□ 1.03
APOA1-201ENST00000236850 ZBTB7CA1YPR0 619 aa21.46■■□□□ 1.03
APOA1-201ENST00000236850 FAM98CQ17RN3 349 aaKnown RBP21.46■■□□□ 1.03
APOA1-201ENST00000236850 CCDC125Q86Z20 511 aa21.46■■□□□ 1.03
APOA1-201ENST00000236850 LMO7Q8WWI1 1683 aa21.45■■□□□ 1.02
APOA1-201ENST00000236850 CAMTA1Q9Y6Y1 1673 aa21.45■■□□□ 1.02
APOA1-201ENST00000236850 SPATA31A1Q5TZJ5 1347 aa21.45■■□□□ 1.02
APOA1-201ENST00000236850 ANKRD36BQ8N2N9 1353 aa21.45■■□□□ 1.02
APOA1-201ENST00000236850 KRT27Q7Z3Y8 459 aa21.44■■□□□ 1.02
APOA1-201ENST00000236850 ARHGEF25Q86VW2 580 aa21.44■■□□□ 1.02
APOA1-201ENST00000236850 NME9Q86XW9 330 aa21.44■■□□□ 1.02
APOA1-201ENST00000236850 BRWD3Q6RI45 1802 aa21.43■■□□□ 1.02
APOA1-201ENST00000236850 USP54Q70EL1 1684 aa21.43■■□□□ 1.02
APOA1-201ENST00000236850 SOX12O15370 315 aa21.42■■□□□ 1.02
APOA1-201ENST00000236850 THRAP3Q9Y2W1 955 aaKnown RBP21.42■■□□□ 1.02
APOA1-201ENST00000236850 LARP1Q6PKG0 1096 aaKnown RBP21.41■■□□□ 1.02
APOA1-201ENST00000236850 BARGINQ6ZT62 677 aa21.41■■□□□ 1.02
APOA1-201ENST00000236850 COL5A2P05997 1499 aaPredicted RBP21.4■■□□□ 1.02
APOA1-201ENST00000236850 TCP11L2Q8N4U5 519 aa21.4■■□□□ 1.02
APOA1-201ENST00000236850 COG3Q96JB2 828 aa21.39■■□□□ 1.01
APOA1-201ENST00000236850 USP35Q9P2H5 1018 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms