RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 SMG6Q86US8 1419 aaKnown RBP31.62■■■□□ 2.65
RRP9-201ENST00000232888 NME9Q86XW9 330 aa31.6■■■□□ 2.65
RRP9-201ENST00000232888 NGDNQ8NEJ9 315 aaKnown RBP31.6■■■□□ 2.65
RRP9-201ENST00000232888 NCOA3Q9Y6Q9 1424 aa31.59■■■□□ 2.65
RRP9-201ENST00000232888 SHPRHQ149N8 1683 aa31.59■■■□□ 2.65
RRP9-201ENST00000232888 PNPLA6Q8IY17 1366 aa31.58■■■□□ 2.65
RRP9-201ENST00000232888 PROSER2Q86WR7 435 aaPredicted RBP31.58■■■□□ 2.65
RRP9-201ENST00000232888 HSPA2P54652 639 aa31.57■■■□□ 2.64
RRP9-201ENST00000232888 NUDCQ9Y266 331 aa31.56■■■□□ 2.64
RRP9-201ENST00000232888 C14orf37Q86TY3 774 aa31.55■■■□□ 2.64
RRP9-201ENST00000232888 PMFBP1Q8TBY8 1022 aa31.55■■■□□ 2.64
RRP9-201ENST00000232888 RGPD8O14715 1765 aaPredicted RBP31.54■■■□□ 2.64
RRP9-201ENST00000232888 COL3A1P02461 1466 aaPredicted RBP31.53■■■□□ 2.64
RRP9-201ENST00000232888 POLKQ9UBT6 870 aa31.52■■■□□ 2.64
RRP9-201ENST00000232888 PHF8Q9UPP1 1060 aa31.51■■■□□ 2.64
RRP9-201ENST00000232888 OVOS2A0A0J9YW53 1432 aa31.51■■■□□ 2.63
RRP9-201ENST00000232888 OVOS2Q6IE36 1432 aa31.51■■■□□ 2.63
RRP9-201ENST00000232888 C19orf44Q9H6X5 657 aa31.51■■■□□ 2.63
RRP9-201ENST00000232888 USP31Q70CQ4 1352 aa31.5■■■□□ 2.63
RRP9-201ENST00000232888 DIAPH1O60610 1272 aaKnown RBP31.47■■■□□ 2.63
RRP9-201ENST00000232888 RUNDC1Q96C34 613 aa31.47■■■□□ 2.63
RRP9-201ENST00000232888 RBM33Q96EV2 1170 aaKnown RBP31.47■■■□□ 2.63
RRP9-201ENST00000232888 ZRANB1Q9UGI0 708 aa31.47■■■□□ 2.63
RRP9-201ENST00000232888 NCBP3Q53F19 620 aaKnown RBP31.47■■■□□ 2.63
RRP9-201ENST00000232888 CDK12Q9NYV4 1490 aaPredicted RBP31.46■■■□□ 2.63
RRP9-201ENST00000232888 DCCP43146 1447 aa31.46■■■□□ 2.63
RRP9-201ENST00000232888 NEFLP07196 543 aa31.45■■■□□ 2.63
RRP9-201ENST00000232888 CCDC146Q8IYE0 955 aa31.44■■■□□ 2.62
RRP9-201ENST00000232888 STRCQ7RTU9 1775 aa31.44■■■□□ 2.62
RRP9-201ENST00000232888 U2AF1L5P0DN76 240 aaPredicted RBP31.43■■■□□ 2.62
RRP9-201ENST00000232888 U2AF1Q01081 240 aaKnown RBP eCLIP31.43■■■□□ 2.62
RRP9-201ENST00000232888 PNNQ9H307 717 aaKnown RBP31.43■■■□□ 2.62
RRP9-201ENST00000232888 SALL2Q9Y467 1007 aaPredicted RBP31.43■■■□□ 2.62
RRP9-201ENST00000232888 ZNF521Q96K83 1311 aa31.42■■■□□ 2.62
RRP9-201ENST00000232888 MAP2P11137 1827 aaKnown RBP31.42■■■□□ 2.62
RRP9-201ENST00000232888 APAF1O14727 1248 aa31.42■■■□□ 2.62
RRP9-201ENST00000232888 TMEM94Q12767 1356 aa31.41■■■□□ 2.62
RRP9-201ENST00000232888 SENP3-EIF4A1A0A087X0R7 540 aa31.4■■■□□ 2.62
RRP9-201ENST00000232888 ESCO1Q5FWF5 840 aa31.4■■■□□ 2.62
RRP9-201ENST00000232888 SUPT16HQ9Y5B9 1047 aaKnown RBP31.39■■■□□ 2.62
RRP9-201ENST00000232888 LRRC7Q96NW7 1537 aa31.39■■■□□ 2.62
RRP9-201ENST00000232888 STRCP1A6NGW2 1772 aa31.39■■■□□ 2.62
RRP9-201ENST00000232888 EMILIN1Q9Y6C2 1016 aa31.38■■■□□ 2.61
RRP9-201ENST00000232888 USP54Q70EL1 1684 aa31.37■■■□□ 2.61
RRP9-201ENST00000232888 U2SURPO15042 1029 aaKnown RBP31.36■■■□□ 2.61
RRP9-201ENST00000232888 PPM1GO15355 546 aaPredicted RBP31.36■■■□□ 2.61
RRP9-201ENST00000232888 ATF3P18847 181 aa31.36■■■□□ 2.61
RRP9-201ENST00000232888 IQSEC2Q5JU85 1478 aa31.35■■■□□ 2.61
RRP9-201ENST00000232888 C1orf167Q5SNV9 1468 aa31.35■■■□□ 2.61
RRP9-201ENST00000232888 PIK3C2AO00443 1686 aa31.35■■■□□ 2.61
RRP9-201ENST00000232888 GOLGA2Q08379 1002 aa31.34■■■□□ 2.61
RRP9-201ENST00000232888 FBLN1P23142 703 aa31.34■■■□□ 2.61
RRP9-201ENST00000232888 PSME1Q06323 249 aa31.34■■■□□ 2.61
RRP9-201ENST00000232888 FCHSD2O94868 740 aa31.33■■■□□ 2.61
RRP9-201ENST00000232888 CADPS2Q86UW7 1296 aa31.33■■■□□ 2.61
RRP9-201ENST00000232888 DMRT2Q9Y5R5 561 aa31.33■■■□□ 2.61
RRP9-201ENST00000232888 KIF1AQ12756 1690 aa31.33■■■□□ 2.61
RRP9-201ENST00000232888 CCDC27Q2M243 656 aa31.32■■■□□ 2.6
RRP9-201ENST00000232888 TCP11L2Q8N4U5 519 aa31.32■■■□□ 2.6
RRP9-201ENST00000232888 IL13P35225 146 aa31.31■■■□□ 2.6
RRP9-201ENST00000232888 NLRP6P59044 892 aa31.31■■■□□ 2.6
RRP9-201ENST00000232888 RRS1Q15050 365 aaKnown RBP31.31■■■□□ 2.6
RRP9-201ENST00000232888 PLEKHF1Q96S99 279 aa31.3■■■□□ 2.6
RRP9-201ENST00000232888 ABTB2Q8N961 1025 aa31.3■■■□□ 2.6
RRP9-201ENST00000232888 MSH6P52701 1360 aa31.29■■■□□ 2.6
RRP9-201ENST00000232888 CDCA7LQ96GN5 454 aa31.29■■■□□ 2.6
RRP9-201ENST00000232888 KIF24Q5T7B8 1368 aa31.29■■■□□ 2.6
RRP9-201ENST00000232888 MST1RQ04912 1400 aa31.28■■■□□ 2.6
RRP9-201ENST00000232888 FKBP8Q14318 412 aa31.28■■■□□ 2.6
RRP9-201ENST00000232888 ORAI2Q96SN7 254 aa31.28■■■□□ 2.6
RRP9-201ENST00000232888 PHF23Q9BUL5 403 aaPredicted RBP31.28■■■□□ 2.6
RRP9-201ENST00000232888 PAK3O75914 559 aaPredicted RBP31.27■■■□□ 2.6
RRP9-201ENST00000232888 RNF123Q5XPI4 1314 aa31.26■■■□□ 2.59
RRP9-201ENST00000232888 ERICH6BQ5W0A0 696 aa31.26■■■□□ 2.59
RRP9-201ENST00000232888 MAPK8IP3Q9UPT6 1336 aa31.25■■■□□ 2.59
RRP9-201ENST00000232888 SLFN5Q08AF3 891 aa31.25■■■□□ 2.59
RRP9-201ENST00000232888 WWC1Q8IX03 1113 aa31.25■■■□□ 2.59
RRP9-201ENST00000232888 SBNO1A3KN83 1393 aa31.24■■■□□ 2.59
RRP9-201ENST00000232888 E9PSI1 815 aa31.24■■■□□ 2.59
RRP9-201ENST00000232888 TRMT2AQ8IZ69 625 aaKnown RBP31.24■■■□□ 2.59
RRP9-201ENST00000232888 WDR63Q8IWG1 891 aa31.23■■■□□ 2.59
RRP9-201ENST00000232888 NEFMP07197 916 aa31.22■■■□□ 2.59
RRP9-201ENST00000232888 FLT4P35916 1363 aa31.22■■■□□ 2.59
RRP9-201ENST00000232888 FOXO3O43524 673 aa31.22■■■□□ 2.59
RRP9-201ENST00000232888 RSPH6AQ9H0K4 717 aa31.22■■■□□ 2.59
RRP9-201ENST00000232888 MAP3K19Q56UN5 1328 aa31.21■■■□□ 2.59
RRP9-201ENST00000232888 DUSP27Q5VZP5 1158 aa31.21■■■□□ 2.59
RRP9-201ENST00000232888 RCAN3Q9UKA8 241 aa31.2■■■□□ 2.58
RRP9-201ENST00000232888 MARF1Q9Y4F3 1742 aaKnown RBP31.2■■■□□ 2.58
RRP9-201ENST00000232888 KCNH5Q8NCM2 988 aa31.18■■■□□ 2.58
RRP9-201ENST00000232888 TMPOP42166 694 aaKnown RBP31.17■■■□□ 2.58
RRP9-201ENST00000232888 KRT28Q7Z3Y7 464 aa31.17■■■□□ 2.58
RRP9-201ENST00000232888 PEAK1Q9H792 1746 aa31.17■■■□□ 2.58
RRP9-201ENST00000232888 ZNF335Q9H4Z2 1342 aaPredicted RBP31.17■■■□□ 2.58
RRP9-201ENST00000232888 EIF4A2Q14240 407 aaKnown RBP31.17■■■□□ 2.58
RRP9-201ENST00000232888 RTL1A6NKG5 1358 aa31.15■■■□□ 2.58
RRP9-201ENST00000232888 XIRP1Q702N8 1843 aaKnown RBP31.15■■■□□ 2.58
RRP9-201ENST00000232888 AMPHP49418 695 aa31.15■■■□□ 2.58
RRP9-201ENST00000232888 RRP7AQ9Y3A4 280 aaKnown RBP31.15■■■□□ 2.58
RRP9-201ENST00000232888 PRKAR2BP31323 418 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms