RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 R3HCC1Q9Y3T6 440 aaKnown RBP7.08□□□□□ -1.28
RFX4-201ENST00000229387 SAFB2Q14151 953 aaKnown RBP eCLIP7.07□□□□□ -1.28
RFX4-201ENST00000229387 POM121Q96HA1 1249 aa7.07□□□□□ -1.28
RFX4-201ENST00000229387 TIGD1Q96MW7 591 aa7.07□□□□□ -1.28
RFX4-201ENST00000229387 ZNF692Q9BU19 519 aaPredicted RBP7.07□□□□□ -1.28
RFX4-201ENST00000229387 ABCA8O94911 1581 aa7.07□□□□□ -1.28
RFX4-201ENST00000229387 DHX29Q7Z478 1369 aaKnown RBP7.07□□□□□ -1.28
RFX4-201ENST00000229387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.07□□□□□ -1.28
RFX4-201ENST00000229387 BECN1Q14457 450 aa7.07□□□□□ -1.28
RFX4-201ENST00000229387 KRI1Q8N9T8 703 aaKnown RBP7.07□□□□□ -1.28
RFX4-201ENST00000229387 KIF3AQ9Y496 699 aa7.07□□□□□ -1.28
RFX4-201ENST00000229387 PLIN1O60240 522 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 MSNP26038 577 aaKnown RBP7.06□□□□□ -1.28
RFX4-201ENST00000229387 SKAP1Q86WV1 359 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 PLEKHG3A1L390 1219 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 GABPB1Q06547 395 aaPredicted RBP7.06□□□□□ -1.28
RFX4-201ENST00000229387 PDE4DQ08499 809 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 LMOD3Q0VAK6 560 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 NBPF11Q86T75 865 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 PNISRQ8TF01 805 aaKnown RBP7.06□□□□□ -1.28
RFX4-201ENST00000229387 PSMD1Q99460 953 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 VIRMAQ69YN4 1812 aaKnown RBP7.06□□□□□ -1.28
RFX4-201ENST00000229387 ARHGEF12Q9NZN5 1544 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 CFAP65Q6ZU64 1925 aaKnown RBP7.06□□□□□ -1.28
RFX4-201ENST00000229387 MCM5P33992 734 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 BARGINQ6ZT62 677 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 ANTXR1Q9H6X2 564 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 RAI14Q9P0K7 980 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 SH3BP1Q9Y3L3 701 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 CCDC141Q6ZP82 1450 aa7.06□□□□□ -1.28
RFX4-201ENST00000229387 SCAPERQ9BY12 1400 aa7.05□□□□□ -1.28
RFX4-201ENST00000229387 ONECUT3O60422 494 aaPredicted RBP7.05□□□□□ -1.28
RFX4-201ENST00000229387 GTF2F1P35269 517 aaKnown RBP eCLIP7.05□□□□□ -1.28
RFX4-201ENST00000229387 SATB1Q01826 763 aa7.05□□□□□ -1.28
RFX4-201ENST00000229387 CFAP70Q5T0N1 1121 aa7.05□□□□□ -1.28
RFX4-201ENST00000229387 DISP3Q9P2K9 1392 aa7.05□□□□□ -1.28
RFX4-201ENST00000229387 RAPGEF3O95398 923 aa7.05□□□□□ -1.28
RFX4-201ENST00000229387 BANK1Q8NDB2 785 aa7.05□□□□□ -1.28
RFX4-201ENST00000229387 TRAIPQ9BWF2 469 aa7.05□□□□□ -1.28
RFX4-201ENST00000229387 CBX1P83916 185 aa7.05□□□□□ -1.28
RFX4-201ENST00000229387 FAM161AQ3B820 660 aa7.04□□□□□ -1.28
RFX4-201ENST00000229387 TMEM132EQ6IEE7 984 aa7.04□□□□□ -1.28
RFX4-201ENST00000229387 MYCBPQ99417 103 aaPredicted RBP7.04□□□□□ -1.28
RFX4-201ENST00000229387 NOL7Q9UMY1 257 aaKnown RBP7.04□□□□□ -1.28
RFX4-201ENST00000229387 CEP83Q9Y592 693 aa7.04□□□□□ -1.28
RFX4-201ENST00000229387 TTC37Q6PGP7 1564 aa7.04□□□□□ -1.28
RFX4-201ENST00000229387 SAMD9LQ8IVG5 1584 aa7.04□□□□□ -1.28
RFX4-201ENST00000229387 TTC36A6NLP5 189 aa7.04□□□□□ -1.28
RFX4-201ENST00000229387 CAPN2P17655 700 aa7.04□□□□□ -1.28
RFX4-201ENST00000229387 PLA2R1Q13018 1463 aa7.04□□□□□ -1.28
RFX4-201ENST00000229387 MCM4P33991 863 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 CTR9Q6PD62 1173 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 CCDC146Q8IYE0 955 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 CALCOCO1Q9P1Z2 691 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 ADGRL2O95490 1459 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.03□□□□□ -1.28
RFX4-201ENST00000229387 CDC42BPAQ5VT25 1732 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 FAM135AQ9P2D6 1515 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 RAD50Q92878 1312 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 LOC102724159A0A0B4J2E5 919 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 PRR29P0C7W0 189 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 PWP2Q15269 919 aaKnown RBP7.03□□□□□ -1.28
RFX4-201ENST00000229387 ATP2B3Q16720 1220 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 MYRIPQ8NFW9 859 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 AK7Q96M32 723 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 FEZ1Q99689 392 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 BCORL1Q5H9F3 1711 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 TRIM6-TRIM34B2RNG4 842 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 CYB5RLQ6IPT4 315 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 TESK2Q96S53 571 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 NCAPGQ9BPX3 1015 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 TRIM34Q9BYJ4 488 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 TRAK1Q9UPV9 953 aa7.03□□□□□ -1.28
RFX4-201ENST00000229387 TRIM66O15016 1216 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 ZNF771Q7L3S4 317 aaPredicted RBP7.02□□□□□ -1.29
RFX4-201ENST00000229387 CHD1O14646 1710 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 IRF6O14896 467 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 CCDC172P0C7W6 258 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 TMF1P82094 1093 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 NBPF9Q3BBW0 867 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 SIRT1Q96EB6 747 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 C8orf34Q49A92 452 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 CHMP4CQ96CF2 233 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 CWC22Q9HCG8 908 aaKnown RBP7.02□□□□□ -1.29
RFX4-201ENST00000229387 SMC4Q9NTJ3 1288 aa7.02□□□□□ -1.29
RFX4-201ENST00000229387 BSDC1Q9NW68 430 aaPredicted RBP7.02□□□□□ -1.29
RFX4-201ENST00000229387 IBTKQ9P2D0 1353 aaPredicted RBP7.01□□□□□ -1.29
RFX4-201ENST00000229387 ADGRF5Q8IZF2 1346 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 MAFGO15525 162 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 MAP2K1Q02750 393 aaPredicted RBP7.01□□□□□ -1.29
RFX4-201ENST00000229387 CC2D2BQ6DHV5 1058 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 CREBRFQ8IUR6 639 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 PRIMPOLQ96LW4 560 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 BRMS1Q9HCU9 246 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 ITSN2Q9NZM3 1697 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 MYBBP1AQ9BQG0 1328 aaKnown RBP7.01□□□□□ -1.29
RFX4-201ENST00000229387 ZNF710Q8N1W2 664 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 EXOC6Q8TAG9 804 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 STK26Q9P289 416 aa7.01□□□□□ -1.29
RFX4-201ENST00000229387 KNSTRNQ9Y448 316 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms