RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 NOL10Q9BSC4 688 aaKnown RBP9.99□□□□□ -0.81
NANOG-201ENST00000229307 DISP3Q9P2K9 1392 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 MBD5Q9P267 1494 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 CDC42BPAQ5VT25 1732 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 NPHP3Q7Z494 1330 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 ZRSR1Q15695 479 aaKnown RBP9.99□□□□□ -0.81
NANOG-201ENST00000229307 ADGRF5Q8IZF2 1346 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 APAF1O14727 1248 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 ZKSCAN2Q63HK3 967 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 RBM42Q9BTD8 480 aaKnown RBP9.99□□□□□ -0.81
NANOG-201ENST00000229307 ADAMTSL3P82987 1691 aa9.98□□□□□ -0.81
NANOG-201ENST00000229307 FRMPD1Q5SYB0 1578 aa9.98□□□□□ -0.81
NANOG-201ENST00000229307 CDC42BPBQ9Y5S2 1711 aa9.98□□□□□ -0.81
NANOG-201ENST00000229307 BRD4O60885 1362 aaPredicted RBP9.98□□□□□ -0.81
NANOG-201ENST00000229307 UGGT1Q9NYU2 1555 aa9.98□□□□□ -0.81
NANOG-201ENST00000229307 DDX54Q8TDD1 881 aaKnown RBP9.98□□□□□ -0.81
NANOG-201ENST00000229307 ELL2O00472 640 aaPredicted RBP9.97□□□□□ -0.81
NANOG-201ENST00000229307 ZC3H6P61129 1189 aaKnown RBP9.97□□□□□ -0.81
NANOG-201ENST00000229307 ZNF530Q6P9A1 599 aaPredicted RBP9.97□□□□□ -0.81
NANOG-201ENST00000229307 SCAF11Q99590 1463 aaKnown RBP9.97□□□□□ -0.81
NANOG-201ENST00000229307 RBM33Q96EV2 1170 aaKnown RBP9.97□□□□□ -0.81
NANOG-201ENST00000229307 NBPF8Q3BBV2 869 aa9.97□□□□□ -0.81
NANOG-201ENST00000229307 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
NANOG-201ENST00000229307 ABCA6Q8N139 1617 aa9.97□□□□□ -0.81
NANOG-201ENST00000229307 FOXO3O43524 673 aa9.97□□□□□ -0.81
NANOG-201ENST00000229307 ADAMTS2O95450 1211 aa9.96□□□□□ -0.81
NANOG-201ENST00000229307 WWC1Q8IX03 1113 aa9.96□□□□□ -0.81
NANOG-201ENST00000229307 C19orf44Q9H6X5 657 aa9.96□□□□□ -0.81
NANOG-201ENST00000229307 FKBP5Q13451 457 aaPredicted RBP9.96□□□□□ -0.82
NANOG-201ENST00000229307 AMOTL1Q8IY63 956 aa9.96□□□□□ -0.82
NANOG-201ENST00000229307 PLA2R1Q13018 1463 aa9.96□□□□□ -0.82
NANOG-201ENST00000229307 KCNA6P17658 529 aa9.96□□□□□ -0.82
NANOG-201ENST00000229307 CCDC30Q5VVM6 783 aa9.96□□□□□ -0.82
NANOG-201ENST00000229307 PPP2R1AP30153 589 aa9.95□□□□□ -0.82
NANOG-201ENST00000229307 ZNF335Q9H4Z2 1342 aaPredicted RBP9.95□□□□□ -0.82
NANOG-201ENST00000229307 PRKAR2BP31323 418 aa9.95□□□□□ -0.82
NANOG-201ENST00000229307 KIF16BQ96L93 1317 aa9.95□□□□□ -0.82
NANOG-201ENST00000229307 SULT6B1Q6IMI4 303 aa9.95□□□□□ -0.82
NANOG-201ENST00000229307 VPS37DQ86XT2 251 aa9.95□□□□□ -0.82
NANOG-201ENST00000229307 TBX22Q9Y458 520 aa9.95□□□□□ -0.82
NANOG-201ENST00000229307 PREX1Q8TCU6 1659 aa9.95□□□□□ -0.82
NANOG-201ENST00000229307 CAMSAP1Q5T5Y3 1602 aa9.94□□□□□ -0.82
NANOG-201ENST00000229307 AMOTQ4VCS5 1084 aa9.94□□□□□ -0.82
NANOG-201ENST00000229307 HSP90AB4PQ58FF6 505 aa9.94□□□□□ -0.82
NANOG-201ENST00000229307 NSD3Q9BZ95 1437 aa9.94□□□□□ -0.82
NANOG-201ENST00000229307 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
NANOG-201ENST00000229307 TRIM34Q9BYJ4 488 aa9.93□□□□□ -0.82
NANOG-201ENST00000229307 TTC21AQ8NDW8 1320 aa9.93□□□□□ -0.82
NANOG-201ENST00000229307 INO80Q9ULG1 1556 aaPredicted RBP9.93□□□□□ -0.82
NANOG-201ENST00000229307 TMEM2Q9UHN6 1383 aa9.93□□□□□ -0.82
NANOG-201ENST00000229307 RPRD2Q5VT52 1461 aaKnown RBP9.92□□□□□ -0.82
NANOG-201ENST00000229307 NSD2O96028 1365 aa9.92□□□□□ -0.82
NANOG-201ENST00000229307 TRIM6-TRIM34B2RNG4 842 aa9.92□□□□□ -0.82
NANOG-201ENST00000229307 DDX19BQ9UMR2 479 aa9.92□□□□□ -0.82
NANOG-201ENST00000229307 EXOC5O00471 708 aa9.92□□□□□ -0.82
NANOG-201ENST00000229307 G3BP1Q13283 466 aaKnown RBP eCLIP9.92□□□□□ -0.82
NANOG-201ENST00000229307 NECTIN2Q92692 538 aa9.92□□□□□ -0.82
NANOG-201ENST00000229307 LRRC59Q96AG4 307 aaKnown RBP9.92□□□□□ -0.82
NANOG-201ENST00000229307 ERVK-7P63135 1459 aa9.92□□□□□ -0.82
NANOG-201ENST00000229307 DNMT1P26358 1616 aaKnown RBP9.91□□□□□ -0.82
NANOG-201ENST00000229307 MAST1Q9Y2H9 1570 aa9.91□□□□□ -0.82
NANOG-201ENST00000229307 CEP170BQ9Y4F5 1589 aaPredicted RBP9.91□□□□□ -0.82
NANOG-201ENST00000229307 KIDINS220Q9ULH0 1771 aa9.91□□□□□ -0.82
NANOG-201ENST00000229307 CLTCQ00610 1675 aaKnown RBP9.91□□□□□ -0.82
NANOG-201ENST00000229307 ZBED9Q6R2W3 1325 aa9.91□□□□□ -0.82
NANOG-201ENST00000229307 FCHSD2O94868 740 aa9.91□□□□□ -0.82
NANOG-201ENST00000229307 B4GALNT3Q6L9W6 998 aa9.91□□□□□ -0.82
NANOG-201ENST00000229307 ARHGAP31Q2M1Z3 1444 aa9.91□□□□□ -0.82
NANOG-201ENST00000229307 GNL2Q13823 731 aaKnown RBP9.9□□□□□ -0.82
NANOG-201ENST00000229307 TMOD3Q9NYL9 352 aa9.9□□□□□ -0.82
NANOG-201ENST00000229307 STARD3NLO95772 234 aa9.9□□□□□ -0.82
NANOG-201ENST00000229307 AIMP1Q12904 312 aaKnown RBP9.9□□□□□ -0.82
NANOG-201ENST00000229307 RRS1Q15050 365 aaKnown RBP9.9□□□□□ -0.82
NANOG-201ENST00000229307 TTC21BQ7Z4L5 1316 aa9.9□□□□□ -0.82
NANOG-201ENST00000229307 CHMP4CQ96CF2 233 aa9.9□□□□□ -0.82
NANOG-201ENST00000229307 HSCBQ8IWL3 235 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 TCP11L2Q8N4U5 519 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 ANO8Q9HCE9 1232 aaPredicted RBP9.89□□□□□ -0.83
NANOG-201ENST00000229307 CPS1P31327 1500 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 ADGRL2O95490 1459 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 EIF2AK4Q9P2K8 1649 aaKnown RBP9.89□□□□□ -0.83
NANOG-201ENST00000229307 AAMPQ13685 434 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 FBXW7Q969H0 707 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 ABCC3O15438 1527 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 PLXNC1O60486 1568 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 ACEP12821 1306 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 TRPM2O94759 1503 aa9.89□□□□□ -0.83
NANOG-201ENST00000229307 GNAT3A8MTJ3 354 aa9.88□□□□□ -0.83
NANOG-201ENST00000229307 DZIP1LQ8IYY4 767 aaKnown RBP9.88□□□□□ -0.83
NANOG-201ENST00000229307 IFIT2P09913 472 aaKnown RBP9.88□□□□□ -0.83
NANOG-201ENST00000229307 EFCAB6Q5THR3 1501 aa9.88□□□□□ -0.83
NANOG-201ENST00000229307 TAOK2Q9UL54 1235 aa9.88□□□□□ -0.83
NANOG-201ENST00000229307 ZNF652Q9Y2D9 606 aa9.88□□□□□ -0.83
NANOG-201ENST00000229307 MROH2AA6NES4 1674 aa9.88□□□□□ -0.83
NANOG-201ENST00000229307 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
NANOG-201ENST00000229307 PUS7Q96PZ0 661 aaKnown RBP9.87□□□□□ -0.83
NANOG-201ENST00000229307 PPP1R1BQ9UD71 204 aaPredicted RBP9.87□□□□□ -0.83
NANOG-201ENST00000229307 NME9Q86XW9 330 aa9.87□□□□□ -0.83
NANOG-201ENST00000229307 GNAI3P08754 354 aa9.87□□□□□ -0.83
NANOG-201ENST00000229307 UBTFL1P0CB47 393 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms