RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 POLR3AO14802 1390 aaPredicted RBP20.32■□□□□ 0.84
GPN3-201ENST00000228827 PPIP5K1Q6PFW1 1433 aa20.32■□□□□ 0.84
GPN3-201ENST00000228827 FAM83GA6ND36 823 aa20.31■□□□□ 0.84
GPN3-201ENST00000228827 NUTM2GQ5VZR2 741 aa20.31■□□□□ 0.84
GPN3-201ENST00000228827 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
GPN3-201ENST00000228827 ALS2Q96Q42 1657 aa20.31■□□□□ 0.84
GPN3-201ENST00000228827 TOPAZ1Q8N9V7 1692 aa20.3■□□□□ 0.84
GPN3-201ENST00000228827 ABCA3Q99758 1704 aa20.3■□□□□ 0.84
GPN3-201ENST00000228827 CCDC9Q9Y3X0 531 aaKnown RBP20.29■□□□□ 0.84
GPN3-201ENST00000228827 EVC2Q86UK5 1308 aa20.28■□□□□ 0.84
GPN3-201ENST00000228827 RALGAPBQ86X10 1494 aa20.28■□□□□ 0.84
GPN3-201ENST00000228827 CARD11Q9BXL7 1154 aa20.28■□□□□ 0.84
GPN3-201ENST00000228827 CABP1Q9NZU7 370 aa20.28■□□□□ 0.84
GPN3-201ENST00000228827 BTG4Q9NY30 223 aa20.26■□□□□ 0.83
GPN3-201ENST00000228827 VPS72Q15906 364 aa20.25■□□□□ 0.83
GPN3-201ENST00000228827 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.25■□□□□ 0.83
GPN3-201ENST00000228827 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
GPN3-201ENST00000228827 PLCH1Q4KWH8 1693 aa20.24■□□□□ 0.83
GPN3-201ENST00000228827 ATAD2Q6PL18 1390 aa20.24■□□□□ 0.83
GPN3-201ENST00000228827 GLI3P10071 1580 aa20.24■□□□□ 0.83
GPN3-201ENST00000228827 PRDM11Q9NQV5 511 aa20.24■□□□□ 0.83
GPN3-201ENST00000228827 ZC3H6P61129 1189 aaKnown RBP20.23■□□□□ 0.83
GPN3-201ENST00000228827 KIAA0232Q92628 1395 aa20.21■□□□□ 0.83
GPN3-201ENST00000228827 CHRNA2Q15822 529 aa20.21■□□□□ 0.83
GPN3-201ENST00000228827 CRYBG1Q9Y4K1 1723 aa20.2■□□□□ 0.82
GPN3-201ENST00000228827 SEPT12Q8IYM1 358 aa20.19■□□□□ 0.82
GPN3-201ENST00000228827 NWD2Q9ULI1 1742 aa20.19■□□□□ 0.82
GPN3-201ENST00000228827 USP6P35125 1406 aa20.19■□□□□ 0.82
GPN3-201ENST00000228827 COL14A1Q05707 1796 aaKnown RBP20.19■□□□□ 0.82
GPN3-201ENST00000228827 A0A0G2JS52 829 aa20.18■□□□□ 0.82
GPN3-201ENST00000228827 MYT1Q01538 1121 aa20.18■□□□□ 0.82
GPN3-201ENST00000228827 NLRP13Q86W25 1043 aa20.18■□□□□ 0.82
GPN3-201ENST00000228827 PCGF6Q9BYE7 350 aa20.18■□□□□ 0.82
GPN3-201ENST00000228827 PHRF1Q9P1Y6 1649 aaKnown RBP20.17■□□□□ 0.82
GPN3-201ENST00000228827 USP19O94966 1318 aa20.16■□□□□ 0.82
GPN3-201ENST00000228827 BRD4O60885 1362 aaPredicted RBP20.16■□□□□ 0.82
GPN3-201ENST00000228827 FAM98CQ17RN3 349 aaKnown RBP20.16■□□□□ 0.82
GPN3-201ENST00000228827 STRN4Q9NRL3 753 aa20.16■□□□□ 0.82
GPN3-201ENST00000228827 NRAPQ86VF7 1730 aa20.15■□□□□ 0.82
GPN3-201ENST00000228827 NLRP6P59044 892 aa20.15■□□□□ 0.82
GPN3-201ENST00000228827 SBNO2Q9Y2G9 1366 aa20.14■□□□□ 0.82
GPN3-201ENST00000228827 GCP02774 474 aa20.14■□□□□ 0.81
GPN3-201ENST00000228827 ZBTB7CA1YPR0 619 aa20.13■□□□□ 0.81
GPN3-201ENST00000228827 ONECUT3O60422 494 aaPredicted RBP20.13■□□□□ 0.81
GPN3-201ENST00000228827 NRKQ7Z2Y5 1582 aa20.13■□□□□ 0.81
GPN3-201ENST00000228827 ZNF692Q9BU19 519 aaPredicted RBP20.12■□□□□ 0.81
GPN3-201ENST00000228827 SPATA31A5Q5VU36 1347 aa20.12■□□□□ 0.81
GPN3-201ENST00000228827 SPATA31A7Q8IWB4 1347 aa20.12■□□□□ 0.81
GPN3-201ENST00000228827 SSH2Q76I76 1423 aa20.12■□□□□ 0.81
GPN3-201ENST00000228827 TTC21BQ7Z4L5 1316 aa20.11■□□□□ 0.81
GPN3-201ENST00000228827 KRT27Q7Z3Y8 459 aa20.11■□□□□ 0.81
GPN3-201ENST00000228827 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
GPN3-201ENST00000228827 ST20-MTHFSA0A0A6YYL1 179 aa20.1■□□□□ 0.81
GPN3-201ENST00000228827 EVA1CP58658 441 aa20.1■□□□□ 0.81
GPN3-201ENST00000228827 CPDO75976 1380 aa20.09■□□□□ 0.81
GPN3-201ENST00000228827 KTN1Q86UP2 1357 aaKnown RBP20.09■□□□□ 0.81
GPN3-201ENST00000228827 USP35Q9P2H5 1018 aa20.09■□□□□ 0.81
GPN3-201ENST00000228827 CPSF1Q10570 1443 aaKnown RBP20.09■□□□□ 0.81
GPN3-201ENST00000228827 SOX12O15370 315 aa20.07■□□□□ 0.8
GPN3-201ENST00000228827 SPATA31A1Q5TZJ5 1347 aa20.07■□□□□ 0.8
GPN3-201ENST00000228827 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
GPN3-201ENST00000228827 SLC12A5Q9H2X9 1139 aa20.06■□□□□ 0.8
GPN3-201ENST00000228827 CAMTA1Q9Y6Y1 1673 aa20.06■□□□□ 0.8
GPN3-201ENST00000228827 PIK3C2AO00443 1686 aa20.06■□□□□ 0.8
GPN3-201ENST00000228827 TTC21AQ8NDW8 1320 aa20.05■□□□□ 0.8
GPN3-201ENST00000228827 CCDC125Q86Z20 511 aa20.05■□□□□ 0.8
GPN3-201ENST00000228827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.05■□□□□ 0.8
GPN3-201ENST00000228827 TESK2Q96S53 571 aa20.05■□□□□ 0.8
GPN3-201ENST00000228827 BRWD3Q6RI45 1802 aa20.05■□□□□ 0.8
GPN3-201ENST00000228827 SLIT3O75094 1523 aa20.05■□□□□ 0.8
GPN3-201ENST00000228827 FAM182BQ5T319 152 aa20.04■□□□□ 0.8
GPN3-201ENST00000228827 HDGFL2Q7Z4V5 671 aaPredicted RBP20.04■□□□□ 0.8
GPN3-201ENST00000228827 CD163L1Q9NR16 1453 aa20.03■□□□□ 0.8
GPN3-201ENST00000228827 ZRANB1Q9UGI0 708 aa20.03■□□□□ 0.8
GPN3-201ENST00000228827 EP400Q96L91 3159 aa20.03■□□□□ 0.8
GPN3-201ENST00000228827 AKAP12Q02952 1782 aa20.02■□□□□ 0.8
GPN3-201ENST00000228827 BLMP54132 1417 aaPredicted RBP20.02■□□□□ 0.8
GPN3-201ENST00000228827 LMO7Q8WWI1 1683 aa20.02■□□□□ 0.79
GPN3-201ENST00000228827 USP47Q96K76 1375 aa20.01■□□□□ 0.79
GPN3-201ENST00000228827 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
GPN3-201ENST00000228827 SF3B2Q13435 895 aaKnown RBP20.01■□□□□ 0.79
GPN3-201ENST00000228827 KCNH5Q8NCM2 988 aa20.01■□□□□ 0.79
GPN3-201ENST00000228827 COL5A2P05997 1499 aaPredicted RBP20■□□□□ 0.79
GPN3-201ENST00000228827 NME9Q86XW9 330 aa20■□□□□ 0.79
GPN3-201ENST00000228827 PUS7Q96PZ0 661 aaKnown RBP20■□□□□ 0.79
GPN3-201ENST00000228827 TERF2IPQ9NYB0 399 aa20■□□□□ 0.79
GPN3-201ENST00000228827 AATKQ6ZMQ8 1374 aa20■□□□□ 0.79
GPN3-201ENST00000228827 TCP11L2Q8N4U5 519 aa19.99■□□□□ 0.79
GPN3-201ENST00000228827 TIMELESSQ9UNS1 1208 aa19.99■□□□□ 0.79
GPN3-201ENST00000228827 A0A1W2PP64 1363 aa19.99■□□□□ 0.79
GPN3-201ENST00000228827 THSD7AQ9UPZ6 1657 aa19.99■□□□□ 0.79
GPN3-201ENST00000228827 DEFB132Q7Z7B7 95 aa19.99■□□□□ 0.79
GPN3-201ENST00000228827 ARHGEF25Q86VW2 580 aa19.99■□□□□ 0.79
GPN3-201ENST00000228827 CCER1Q8TC90 406 aaPredicted RBP19.99■□□□□ 0.79
GPN3-201ENST00000228827 AXIN2Q9Y2T1 843 aa19.99■□□□□ 0.79
GPN3-201ENST00000228827 BARGINQ6ZT62 677 aa19.98■□□□□ 0.79
GPN3-201ENST00000228827 MON2Q7Z3U7 1717 aa19.97■□□□□ 0.79
GPN3-201ENST00000228827 SLC24A1O60721 1099 aa19.97■□□□□ 0.79
GPN3-201ENST00000228827 EDC4Q6P2E9 1401 aaKnown RBP19.96■□□□□ 0.79
GPN3-201ENST00000228827 TMF1P82094 1093 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms