RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 TNNQ9UQP3 1299 aa22.36■■□□□ 1.17
PRPF19-201ENST00000227524 PCDHB15Q9Y5E8 787 aa22.36■■□□□ 1.17
PRPF19-201ENST00000227524 CEBPAP49715 358 aaPredicted RBP22.35■■□□□ 1.17
PRPF19-201ENST00000227524 CCDC27Q2M243 656 aa22.35■■□□□ 1.17
PRPF19-201ENST00000227524 SAFB2Q14151 953 aaKnown RBP eCLIP22.33■■□□□ 1.16
PRPF19-201ENST00000227524 ADGRB2O60241 1585 aa22.33■■□□□ 1.16
PRPF19-201ENST00000227524 MTHFSP49914 203 aa22.32■■□□□ 1.16
PRPF19-201ENST00000227524 PUS7Q96PZ0 661 aaKnown RBP22.32■■□□□ 1.16
PRPF19-201ENST00000227524 PDZRN3Q9UPQ7 1066 aa22.32■■□□□ 1.16
PRPF19-201ENST00000227524 EVC2Q86UK5 1308 aa22.32■■□□□ 1.16
PRPF19-201ENST00000227524 CFAP53Q96M91 514 aa22.31■■□□□ 1.16
PRPF19-201ENST00000227524 PRAM1Q96QH2 718 aa22.31■■□□□ 1.16
PRPF19-201ENST00000227524 BCL2L13Q9BXK5 485 aa22.31■■□□□ 1.16
PRPF19-201ENST00000227524 TMEM2Q9UHN6 1383 aa22.31■■□□□ 1.16
PRPF19-201ENST00000227524 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.29■■□□□ 1.16
PRPF19-201ENST00000227524 DLC1Q96QB1 1528 aa22.29■■□□□ 1.16
PRPF19-201ENST00000227524 TBC1D32Q96NH3 1257 aa22.29■■□□□ 1.16
PRPF19-201ENST00000227524 UPF2Q9HAU5 1272 aaKnown RBP22.29■■□□□ 1.16
PRPF19-201ENST00000227524 NCBP3Q53F19 620 aaKnown RBP22.28■■□□□ 1.16
PRPF19-201ENST00000227524 RWDD1Q9H446 243 aaPredicted RBP22.28■■□□□ 1.16
PRPF19-201ENST00000227524 MYH16Q9H6N6 1097 aa22.28■■□□□ 1.16
PRPF19-201ENST00000227524 METP08581 1390 aa22.27■■□□□ 1.16
PRPF19-201ENST00000227524 SLKQ9H2G2 1235 aaPredicted RBP22.27■■□□□ 1.16
PRPF19-201ENST00000227524 CABP2Q9NPB3 220 aa22.27■■□□□ 1.16
PRPF19-201ENST00000227524 NSD2O96028 1365 aa22.26■■□□□ 1.15
PRPF19-201ENST00000227524 ANTXR1Q9H6X2 564 aa22.26■■□□□ 1.15
PRPF19-201ENST00000227524 MVPQ14764 893 aaKnown RBP22.25■■□□□ 1.15
PRPF19-201ENST00000227524 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
PRPF19-201ENST00000227524 ABCC11Q96J66 1382 aa22.25■■□□□ 1.15
PRPF19-201ENST00000227524 MINK1Q8N4C8 1332 aaPredicted RBP22.25■■□□□ 1.15
PRPF19-201ENST00000227524 POGKQ9P215 609 aa22.25■■□□□ 1.15
PRPF19-201ENST00000227524 U2AF1L5P0DN76 240 aaPredicted RBP22.22■■□□□ 1.15
PRPF19-201ENST00000227524 LTKP29376 864 aa22.22■■□□□ 1.15
PRPF19-201ENST00000227524 U2AF1Q01081 240 aaKnown RBP eCLIP22.22■■□□□ 1.15
PRPF19-201ENST00000227524 ZKSCAN2Q63HK3 967 aa22.22■■□□□ 1.15
PRPF19-201ENST00000227524 TBC1D2Q9BYX2 928 aa22.22■■□□□ 1.15
PRPF19-201ENST00000227524 ADAMTS13Q76LX8 1427 aa22.21■■□□□ 1.15
PRPF19-201ENST00000227524 WAPLQ7Z5K2 1190 aa22.21■■□□□ 1.15
PRPF19-201ENST00000227524 KNDC1Q76NI1 1749 aa22.21■■□□□ 1.15
PRPF19-201ENST00000227524 HDGFP51858 240 aaKnown RBP22.21■■□□□ 1.15
PRPF19-201ENST00000227524 DZIP1LQ8IYY4 767 aaKnown RBP22.2■■□□□ 1.14
PRPF19-201ENST00000227524 CT47B1P0C2W7 299 aaPredicted RBP22.19■■□□□ 1.14
PRPF19-201ENST00000227524 ARHGAP23Q9P227 1491 aa22.19■■□□□ 1.14
PRPF19-201ENST00000227524 SRPK2P78362 688 aaKnown RBP22.19■■□□□ 1.14
PRPF19-201ENST00000227524 FTSJ3Q8IY81 847 aaKnown RBP22.19■■□□□ 1.14
PRPF19-201ENST00000227524 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.19■■□□□ 1.14
PRPF19-201ENST00000227524 SLIT1O75093 1534 aa22.19■■□□□ 1.14
PRPF19-201ENST00000227524 TECPR2O15040 1411 aa22.19■■□□□ 1.14
PRPF19-201ENST00000227524 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
PRPF19-201ENST00000227524 CD163L1Q9NR16 1453 aa22.17■■□□□ 1.14
PRPF19-201ENST00000227524 A0A1W2PP64 1363 aa22.17■■□□□ 1.14
PRPF19-201ENST00000227524 ATAD2Q6PL18 1390 aa22.17■■□□□ 1.14
PRPF19-201ENST00000227524 PLEKHG1Q9ULL1 1385 aa22.17■■□□□ 1.14
PRPF19-201ENST00000227524 TSR2Q969E8 191 aaKnown RBP22.16■■□□□ 1.14
PRPF19-201ENST00000227524 FAM43AQ8N2R8 423 aa22.16■■□□□ 1.14
PRPF19-201ENST00000227524 CDK19Q9BWU1 502 aa22.16■■□□□ 1.14
PRPF19-201ENST00000227524 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
PRPF19-201ENST00000227524 CPS1P31327 1500 aa22.16■■□□□ 1.14
PRPF19-201ENST00000227524 MED14O60244 1454 aa22.15■■□□□ 1.14
PRPF19-201ENST00000227524 COL3A1P02461 1466 aaPredicted RBP22.15■■□□□ 1.14
PRPF19-201ENST00000227524 RIMS1Q86UR5 1692 aaKnown RBP22.15■■□□□ 1.14
PRPF19-201ENST00000227524 SMC4Q9NTJ3 1288 aa22.14■■□□□ 1.13
PRPF19-201ENST00000227524 EXOSC9Q06265 439 aaKnown RBP22.14■■□□□ 1.13
PRPF19-201ENST00000227524 TXNDC2Q86VQ3 553 aa22.13■■□□□ 1.13
PRPF19-201ENST00000227524 PLEKHF1Q96S99 279 aa22.13■■□□□ 1.13
PRPF19-201ENST00000227524 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
PRPF19-201ENST00000227524 HDAC1Q13547 482 aaPredicted RBP22.12■■□□□ 1.13
PRPF19-201ENST00000227524 TRIM27P14373 513 aa22.12■■□□□ 1.13
PRPF19-201ENST00000227524 ADAMTSL3P82987 1691 aa22.11■■□□□ 1.13
PRPF19-201ENST00000227524 TMPOP42166 694 aaKnown RBP22.11■■□□□ 1.13
PRPF19-201ENST00000227524 L1TD1Q5T7N2 865 aaKnown RBP22.11■■□□□ 1.13
PRPF19-201ENST00000227524 AEBP2Q6ZN18 517 aaPredicted RBP22.11■■□□□ 1.13
PRPF19-201ENST00000227524 SIRT1Q96EB6 747 aa22.11■■□□□ 1.13
PRPF19-201ENST00000227524 C22orf23Q9BZE7 217 aa22.11■■□□□ 1.13
PRPF19-201ENST00000227524 TRIM35Q9UPQ4 493 aa22.11■■□□□ 1.13
PRPF19-201ENST00000227524 SSH1Q8WYL5 1049 aa22.1■■□□□ 1.13
PRPF19-201ENST00000227524 DDX19BQ9UMR2 479 aa22.1■■□□□ 1.13
PRPF19-201ENST00000227524 ROBO2Q9HCK4 1378 aa22.09■■□□□ 1.13
PRPF19-201ENST00000227524 U2SURPO15042 1029 aaKnown RBP22.09■■□□□ 1.13
PRPF19-201ENST00000227524 ATF7IPQ6VMQ6 1270 aa22.09■■□□□ 1.13
PRPF19-201ENST00000227524 ITPRIPQ8IWB1 547 aa22.09■■□□□ 1.13
PRPF19-201ENST00000227524 MFAP1P55081 439 aaKnown RBP22.08■■□□□ 1.13
PRPF19-201ENST00000227524 CEP170BQ9Y4F5 1589 aaPredicted RBP22.08■■□□□ 1.13
PRPF19-201ENST00000227524 IL16Q14005 1332 aa22.08■■□□□ 1.12
PRPF19-201ENST00000227524 PTPRUQ92729 1446 aa22.07■■□□□ 1.12
PRPF19-201ENST00000227524 SPRYD3Q8NCJ5 442 aa22.07■■□□□ 1.12
PRPF19-201ENST00000227524 CABP1Q9NZU7 370 aa22.06■■□□□ 1.12
PRPF19-201ENST00000227524 EID1Q9Y6B2 187 aa22.06■■□□□ 1.12
PRPF19-201ENST00000227524 SMC5Q8IY18 1101 aa22.06■■□□□ 1.12
PRPF19-201ENST00000227524 THEMISQ8N1K5 641 aaPredicted RBP22.06■■□□□ 1.12
PRPF19-201ENST00000227524 SLC26A8Q96RN1 970 aa22.06■■□□□ 1.12
PRPF19-201ENST00000227524 KDM4FA0A1W2PPD8 638 aa22.05■■□□□ 1.12
PRPF19-201ENST00000227524 WASLO00401 505 aaPredicted RBP22.05■■□□□ 1.12
PRPF19-201ENST00000227524 MCM4P33991 863 aa22.05■■□□□ 1.12
PRPF19-201ENST00000227524 GGNBP2Q9H3C7 697 aa22.05■■□□□ 1.12
PRPF19-201ENST00000227524 NOB1Q9ULX3 412 aaKnown RBP22.05■■□□□ 1.12
PRPF19-201ENST00000227524 TERF2IPQ9NYB0 399 aa22.04■■□□□ 1.12
PRPF19-201ENST00000227524 CHMP5Q9NZZ3 219 aa22.04■■□□□ 1.12
PRPF19-201ENST00000227524 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.04■■□□□ 1.12
PRPF19-201ENST00000227524 TMEM57Q8N5G2 664 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms