RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 HDGFP51858 240 aaKnown RBP8.44□□□□□ -1.06
AFP-201ENST00000226359 DSG2Q14126 1118 aa8.44□□□□□ -1.06
AFP-201ENST00000226359 SCAF11Q99590 1463 aaKnown RBP8.44□□□□□ -1.06
AFP-201ENST00000226359 DOK7Q18PE1 504 aa8.44□□□□□ -1.06
AFP-201ENST00000226359 PPP1R15AO75807 674 aaPredicted RBP8.43□□□□□ -1.06
AFP-201ENST00000226359 CAMK2BQ13554 666 aa8.43□□□□□ -1.06
AFP-201ENST00000226359 TET3O43151 1660 aa8.43□□□□□ -1.06
AFP-201ENST00000226359 ZNF335Q9H4Z2 1342 aaPredicted RBP8.43□□□□□ -1.06
AFP-201ENST00000226359 ACIN1Q9UKV3 1341 aaKnown RBP8.43□□□□□ -1.06
AFP-201ENST00000226359 POLR1AO95602 1720 aaPredicted RBP8.43□□□□□ -1.06
AFP-201ENST00000226359 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 TXNDC2Q86VQ3 553 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 ZNF687Q8N1G0 1237 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 ADGRB3O60242 1522 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 CPS1P31327 1500 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 NOS1P29475 1434 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 G3V3G9 751 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 TMEM92Q6UXU6 159 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 TRIM52Q96A61 297 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 MED14O60244 1454 aa8.42□□□□□ -1.06
AFP-201ENST00000226359 TMEM2Q9UHN6 1383 aa8.41□□□□□ -1.06
AFP-201ENST00000226359 HOXB3P14651 431 aaPredicted RBP8.41□□□□□ -1.06
AFP-201ENST00000226359 TRIM26Q12899 539 aaPredicted RBP8.41□□□□□ -1.06
AFP-201ENST00000226359 TMC2Q8TDI7 906 aa8.41□□□□□ -1.06
AFP-201ENST00000226359 IQGAP3Q86VI3 1631 aa8.41□□□□□ -1.06
AFP-201ENST00000226359 SLIT1O75093 1534 aa8.41□□□□□ -1.06
AFP-201ENST00000226359 RIMBP2O15034 1052 aa8.41□□□□□ -1.06
AFP-201ENST00000226359 IDI1Q13907 227 aa8.41□□□□□ -1.06
AFP-201ENST00000226359 VARS2Q5ST30 1063 aaKnown RBP8.41□□□□□ -1.06
AFP-201ENST00000226359 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.41□□□□□ -1.06
AFP-201ENST00000226359 EMILIN3Q9NT22 766 aa8.41□□□□□ -1.06
AFP-201ENST00000226359 GCC2Q8IWJ2 1684 aa8.4□□□□□ -1.06
AFP-201ENST00000226359 HFM1A2PYH4 1435 aa8.4□□□□□ -1.06
AFP-201ENST00000226359 NEURL4Q96JN8 1562 aa8.4□□□□□ -1.06
AFP-201ENST00000226359 ARHGAP23Q9P227 1491 aa8.4□□□□□ -1.06
AFP-201ENST00000226359 KIF3CO14782 793 aa8.4□□□□□ -1.06
AFP-201ENST00000226359 IQGAP1P46940 1657 aa8.39□□□□□ -1.07
AFP-201ENST00000226359 PIK3C2BO00750 1634 aa8.39□□□□□ -1.07
AFP-201ENST00000226359 LTBP4Q8N2S1 1624 aa8.39□□□□□ -1.07
AFP-201ENST00000226359 TESPA1A2RU30 521 aaPredicted RBP8.39□□□□□ -1.07
AFP-201ENST00000226359 UBAP1LF5GYI3 381 aa8.39□□□□□ -1.07
AFP-201ENST00000226359 FOXK1P85037 733 aa8.39□□□□□ -1.07
AFP-201ENST00000226359 NAIPQ13075 1403 aa8.39□□□□□ -1.07
AFP-201ENST00000226359 SYNMO15061 1565 aa8.39□□□□□ -1.07
AFP-201ENST00000226359 UBR1Q8IWV7 1749 aa8.39□□□□□ -1.07
AFP-201ENST00000226359 KDM5AP29375 1690 aaKnown RBP8.39□□□□□ -1.07
AFP-201ENST00000226359 RIMS2Q9UQ26 1411 aa8.37□□□□□ -1.07
AFP-201ENST00000226359 DPYSL4O14531 572 aa8.37□□□□□ -1.07
AFP-201ENST00000226359 TOM1O60784 492 aa8.37□□□□□ -1.07
AFP-201ENST00000226359 ZMYND10O75800 440 aa8.37□□□□□ -1.07
AFP-201ENST00000226359 PLPP6Q8IY26 295 aa8.37□□□□□ -1.07
AFP-201ENST00000226359 ARIH1Q9Y4X5 557 aaPredicted RBP8.37□□□□□ -1.07
AFP-201ENST00000226359 RGS20O76081 388 aa8.36□□□□□ -1.07
AFP-201ENST00000226359 LTKP29376 864 aa8.36□□□□□ -1.07
AFP-201ENST00000226359 ZNF326Q5BKZ1 582 aaKnown RBP8.36□□□□□ -1.07
AFP-201ENST00000226359 GPBP1L1Q9HC44 474 aaPredicted RBP8.36□□□□□ -1.07
AFP-201ENST00000226359 HCSTQ9UBK5 93 aa8.36□□□□□ -1.07
AFP-201ENST00000226359 PLEKHG1Q9ULL1 1385 aa8.35□□□□□ -1.07
AFP-201ENST00000226359 CFAP65Q6ZU64 1925 aaKnown RBP8.35□□□□□ -1.07
AFP-201ENST00000226359 E9PCH4 1651 aa8.34□□□□□ -1.07
AFP-201ENST00000226359 HRCP23327 699 aa8.34□□□□□ -1.07
AFP-201ENST00000226359 ZMYND15Q9H091 742 aa8.34□□□□□ -1.07
AFP-201ENST00000226359 MLLT3P42568 568 aaPredicted RBP8.33□□□□□ -1.08
AFP-201ENST00000226359 TRPM2O94759 1503 aa8.33□□□□□ -1.08
AFP-201ENST00000226359 ZFYVE9O95405 1425 aa8.33□□□□□ -1.08
AFP-201ENST00000226359 KCNA6P17658 529 aa8.33□□□□□ -1.08
AFP-201ENST00000226359 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
AFP-201ENST00000226359 UPF1Q92900 1129 aaKnown RBP eCLIP8.33□□□□□ -1.08
AFP-201ENST00000226359 SLC26A8Q96RN1 970 aa8.33□□□□□ -1.08
AFP-201ENST00000226359 ZSWIM6Q9HCJ5 1215 aa8.33□□□□□ -1.08
AFP-201ENST00000226359 SETD5Q9C0A6 1442 aa8.32□□□□□ -1.08
AFP-201ENST00000226359 TMEM131LA2VDJ0 1609 aa8.32□□□□□ -1.08
AFP-201ENST00000226359 PIP4K2BP78356 416 aa8.32□□□□□ -1.08
AFP-201ENST00000226359 PROSER2Q86WR7 435 aaPredicted RBP8.32□□□□□ -1.08
AFP-201ENST00000226359 ARID3AQ99856 593 aa8.32□□□□□ -1.08
AFP-201ENST00000226359 NKTRP30414 1462 aaKnown RBP8.32□□□□□ -1.08
AFP-201ENST00000226359 SPHKAPQ2M3C7 1700 aa8.32□□□□□ -1.08
AFP-201ENST00000226359 DIP2AQ14689 1571 aa8.32□□□□□ -1.08
AFP-201ENST00000226359 ANKRD13DQ6ZTN6 518 aa8.31□□□□□ -1.08
AFP-201ENST00000226359 LRRC7Q96NW7 1537 aa8.31□□□□□ -1.08
AFP-201ENST00000226359 IRX2Q9BZI1 471 aaPredicted RBP8.31□□□□□ -1.08
AFP-201ENST00000226359 CCDC144AA2RUR9 1427 aa8.3□□□□□ -1.08
AFP-201ENST00000226359 TBX22Q9Y458 520 aa8.3□□□□□ -1.08
AFP-201ENST00000226359 MSH6P52701 1360 aa8.3□□□□□ -1.08
AFP-201ENST00000226359 PIK3R4Q99570 1358 aa8.3□□□□□ -1.08
AFP-201ENST00000226359 PDIA6Q15084 440 aa8.29□□□□□ -1.08
AFP-201ENST00000226359 NUTM2DQ5VT03 806 aaPredicted RBP8.29□□□□□ -1.08
AFP-201ENST00000226359 BARGINQ6ZT62 677 aa8.29□□□□□ -1.08
AFP-201ENST00000226359 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
AFP-201ENST00000226359 RPGRIP1LQ68CZ1 1315 aa8.29□□□□□ -1.08
AFP-201ENST00000226359 TMEM94Q12767 1356 aa8.29□□□□□ -1.08
AFP-201ENST00000226359 PCGF6Q9BYE7 350 aa8.29□□□□□ -1.08
AFP-201ENST00000226359 MPHOSPH9Q99550 1183 aa8.28□□□□□ -1.08
AFP-201ENST00000226359 C1orf115Q9H7X2 142 aa8.28□□□□□ -1.08
AFP-201ENST00000226359 NWD1Q149M9 1564 aa8.28□□□□□ -1.08
AFP-201ENST00000226359 CLTCL1P53675 1640 aa8.27□□□□□ -1.09
AFP-201ENST00000226359 RBM26Q5T8P6 1007 aaKnown RBP8.27□□□□□ -1.09
AFP-201ENST00000226359 RAB3GAP2Q9H2M9 1393 aa8.27□□□□□ -1.09
AFP-201ENST00000226359 NCOA3Q9Y6Q9 1424 aa8.26□□□□□ -1.09
AFP-201ENST00000226359 ADAMTS13Q76LX8 1427 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms