RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 TBC1D9Q6ZT07 1266 aa17.59■□□□□ 0.41
SHPK-201ENST00000225519 ZBTB40Q9NUA8 1239 aa17.59■□□□□ 0.41
SHPK-201ENST00000225519 MADDQ8WXG6 1647 aa17.59■□□□□ 0.41
SHPK-201ENST00000225519 KIF16BQ96L93 1317 aa17.58■□□□□ 0.41
SHPK-201ENST00000225519 DNTTIP2Q5QJE6 756 aaKnown RBP17.58■□□□□ 0.41
SHPK-201ENST00000225519 IQGAP1P46940 1657 aa17.58■□□□□ 0.4
SHPK-201ENST00000225519 MAST1Q9Y2H9 1570 aa17.58■□□□□ 0.4
SHPK-201ENST00000225519 EFCAB2Q5VUJ9 269 aa17.58■□□□□ 0.4
SHPK-201ENST00000225519 ERVK-7P63135 1459 aa17.58■□□□□ 0.4
SHPK-201ENST00000225519 DUOX2Q9NRD8 1548 aa17.58■□□□□ 0.4
SHPK-201ENST00000225519 NUCB2P80303 420 aa17.58■□□□□ 0.4
SHPK-201ENST00000225519 SPAG9O60271 1321 aaKnown RBP17.57■□□□□ 0.4
SHPK-201ENST00000225519 ZSCAN23Q3MJ62 389 aa17.57■□□□□ 0.4
SHPK-201ENST00000225519 PRPF40AO75400 957 aaKnown RBP17.56■□□□□ 0.4
SHPK-201ENST00000225519 TMPOP42166 694 aaKnown RBP17.55■□□□□ 0.4
SHPK-201ENST00000225519 CSPP1Q1MSJ5 1256 aa17.55■□□□□ 0.4
SHPK-201ENST00000225519 FOXD4L5Q5VV16 416 aaPredicted RBP17.55■□□□□ 0.4
SHPK-201ENST00000225519 FOXD4L4Q8WXT5 416 aaPredicted RBP17.55■□□□□ 0.4
SHPK-201ENST00000225519 KANK1Q14678 1352 aa17.55■□□□□ 0.4
SHPK-201ENST00000225519 CDC45O75419 566 aa17.55■□□□□ 0.4
SHPK-201ENST00000225519 RBSNQ9H1K0 784 aa17.54■□□□□ 0.4
SHPK-201ENST00000225519 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
SHPK-201ENST00000225519 KIF3BO15066 747 aa17.54■□□□□ 0.4
SHPK-201ENST00000225519 TERF1P54274 439 aa17.54■□□□□ 0.4
SHPK-201ENST00000225519 KIF2CQ99661 725 aa17.54■□□□□ 0.4
SHPK-201ENST00000225519 NOL7Q9UMY1 257 aaKnown RBP17.54■□□□□ 0.4
SHPK-201ENST00000225519 MYOM1P52179 1685 aa17.54■□□□□ 0.4
SHPK-201ENST00000225519 MLECQ14165 292 aa17.53■□□□□ 0.4
SHPK-201ENST00000225519 RNF214Q8ND24 703 aa17.53■□□□□ 0.4
SHPK-201ENST00000225519 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
SHPK-201ENST00000225519 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
SHPK-201ENST00000225519 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
SHPK-201ENST00000225519 TTC37Q6PGP7 1564 aa17.53■□□□□ 0.4
SHPK-201ENST00000225519 CDC42BPBQ9Y5S2 1711 aa17.53■□□□□ 0.4
SHPK-201ENST00000225519 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
SHPK-201ENST00000225519 ZNF445P59923 1031 aa17.52■□□□□ 0.4
SHPK-201ENST00000225519 RABEP1Q15276 862 aa17.52■□□□□ 0.4
SHPK-201ENST00000225519 HS1BP3Q53T59 392 aa17.52■□□□□ 0.4
SHPK-201ENST00000225519 PREX2Q70Z35 1606 aa17.52■□□□□ 0.39
SHPK-201ENST00000225519 AFAP1Q8N556 730 aa17.52■□□□□ 0.39
SHPK-201ENST00000225519 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
SHPK-201ENST00000225519 PRDM10Q9NQV6 1147 aa17.51■□□□□ 0.39
SHPK-201ENST00000225519 SAFB2Q14151 953 aaKnown RBP eCLIP17.51■□□□□ 0.39
SHPK-201ENST00000225519 MTERF4Q7Z6M4 381 aaKnown RBP17.51■□□□□ 0.39
SHPK-201ENST00000225519 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
SHPK-201ENST00000225519 ZKSCAN5Q9Y2L8 839 aa17.5■□□□□ 0.39
SHPK-201ENST00000225519 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
SHPK-201ENST00000225519 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
SHPK-201ENST00000225519 IQSEC2Q5JU85 1478 aa17.5■□□□□ 0.39
SHPK-201ENST00000225519 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
SHPK-201ENST00000225519 SYCE3A1L190 88 aa17.49■□□□□ 0.39
SHPK-201ENST00000225519 PTPRTO14522 1441 aa17.49■□□□□ 0.39
SHPK-201ENST00000225519 ST18O60284 1047 aa17.48■□□□□ 0.39
SHPK-201ENST00000225519 ZNF500O60304 480 aaPredicted RBP17.48■□□□□ 0.39
SHPK-201ENST00000225519 LMBRD1Q9NUN5 540 aa17.48■□□□□ 0.39
SHPK-201ENST00000225519 APBB1O00213 710 aa17.48■□□□□ 0.39
SHPK-201ENST00000225519 DYNC1I1O14576 645 aa17.48■□□□□ 0.39
SHPK-201ENST00000225519 ESF1Q9H501 851 aaKnown RBP17.48■□□□□ 0.39
SHPK-201ENST00000225519 GGNBP2Q9H3C7 697 aa17.48■□□□□ 0.39
SHPK-201ENST00000225519 CEP152O94986 1710 aa17.48■□□□□ 0.39
SHPK-201ENST00000225519 PKP1Q13835 747 aa17.47■□□□□ 0.39
SHPK-201ENST00000225519 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
SHPK-201ENST00000225519 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
SHPK-201ENST00000225519 SASS6Q6UVJ0 657 aa17.47■□□□□ 0.39
SHPK-201ENST00000225519 ABCC11Q96J66 1382 aa17.47■□□□□ 0.39
SHPK-201ENST00000225519 ZNF518AQ6AHZ1 1483 aa17.47■□□□□ 0.39
SHPK-201ENST00000225519 MPNDQ8N594 471 aa17.46■□□□□ 0.39
SHPK-201ENST00000225519 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
SHPK-201ENST00000225519 TPRNQ4KMQ1 711 aa17.45■□□□□ 0.38
SHPK-201ENST00000225519 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
SHPK-201ENST00000225519 ZHX1Q9UKY1 873 aaPredicted RBP17.45■□□□□ 0.38
SHPK-201ENST00000225519 CLEC17AQ6ZS10 378 aa17.44■□□□□ 0.38
SHPK-201ENST00000225519 CWC22Q9HCG8 908 aaKnown RBP17.44■□□□□ 0.38
SHPK-201ENST00000225519 TRPM2O94759 1503 aa17.44■□□□□ 0.38
SHPK-201ENST00000225519 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
SHPK-201ENST00000225519 AK9Q5TCS8 1911 aa17.44■□□□□ 0.38
SHPK-201ENST00000225519 MCM5P33992 734 aa17.44■□□□□ 0.38
SHPK-201ENST00000225519 SPHKAPQ2M3C7 1700 aa17.44■□□□□ 0.38
SHPK-201ENST00000225519 ALDH1L2Q3SY69 923 aa17.43■□□□□ 0.38
SHPK-201ENST00000225519 ZGPATQ8N5A5 531 aaKnown RBP17.43■□□□□ 0.38
SHPK-201ENST00000225519 LRSAM1Q6UWE0 723 aa17.43■□□□□ 0.38
SHPK-201ENST00000225519 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
SHPK-201ENST00000225519 SRPK2P78362 688 aaKnown RBP17.43■□□□□ 0.38
SHPK-201ENST00000225519 KIAA2012Q0VF49 1180 aa17.43■□□□□ 0.38
SHPK-201ENST00000225519 FOXD4L6Q3SYB3 417 aaPredicted RBP17.43■□□□□ 0.38
SHPK-201ENST00000225519 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
SHPK-201ENST00000225519 INTS3Q68E01 1043 aaKnown RBP17.43■□□□□ 0.38
SHPK-201ENST00000225519 FOXD4L3Q6VB84 417 aaPredicted RBP17.43■□□□□ 0.38
SHPK-201ENST00000225519 PRDM4Q9UKN5 801 aa17.43■□□□□ 0.38
SHPK-201ENST00000225519 CHAMP1Q96JM3 812 aa17.42■□□□□ 0.38
SHPK-201ENST00000225519 PDLIM2Q96JY6 352 aa17.42■□□□□ 0.38
SHPK-201ENST00000225519 TRAPPC8Q9Y2L5 1435 aa17.42■□□□□ 0.38
SHPK-201ENST00000225519 ZBTB7BO15156 539 aaPredicted RBP17.42■□□□□ 0.38
SHPK-201ENST00000225519 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
SHPK-201ENST00000225519 SMAP1Q8IYB5 467 aaPredicted RBP17.42■□□□□ 0.38
SHPK-201ENST00000225519 CLTCL1P53675 1640 aa17.42■□□□□ 0.38
SHPK-201ENST00000225519 IL16Q14005 1332 aa17.41■□□□□ 0.38
SHPK-201ENST00000225519 DIAPH1O60610 1272 aaKnown RBP17.41■□□□□ 0.38
SHPK-201ENST00000225519 GPT2Q8TD30 523 aa17.41■□□□□ 0.38
SHPK-201ENST00000225519 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms