RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 PRPF40AO75400 957 aaKnown RBP17.83■□□□□ 0.45
SFXN3-201ENST00000224807 PLCB2Q00722 1185 aa17.83■□□□□ 0.45
SFXN3-201ENST00000224807 CALD1Q05682 793 aaKnown RBP17.83■□□□□ 0.45
SFXN3-201ENST00000224807 ABCC1P33527 1531 aa17.83■□□□□ 0.45
SFXN3-201ENST00000224807 PTMAP06454 111 aaKnown RBP17.83■□□□□ 0.44
SFXN3-201ENST00000224807 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.44
SFXN3-201ENST00000224807 SHPRHQ149N8 1683 aa17.83■□□□□ 0.44
SFXN3-201ENST00000224807 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.44
SFXN3-201ENST00000224807 JARID2Q92833 1246 aaPredicted RBP17.83■□□□□ 0.44
SFXN3-201ENST00000224807 FAM177BA6PVY3 158 aa17.82■□□□□ 0.44
SFXN3-201ENST00000224807 BCL11BQ9C0K0 894 aaPredicted RBP17.82■□□□□ 0.44
SFXN3-201ENST00000224807 SRPK2P78362 688 aaKnown RBP17.81■□□□□ 0.44
SFXN3-201ENST00000224807 TSC1Q92574 1164 aa17.81■□□□□ 0.44
SFXN3-201ENST00000224807 HMOX1P09601 288 aa17.81■□□□□ 0.44
SFXN3-201ENST00000224807 TBC1D9Q6ZT07 1266 aa17.81■□□□□ 0.44
SFXN3-201ENST00000224807 ZMYM3Q14202 1370 aa17.81■□□□□ 0.44
SFXN3-201ENST00000224807 ATAD2Q6PL18 1390 aa17.81■□□□□ 0.44
SFXN3-201ENST00000224807 ABCA6Q8N139 1617 aa17.81■□□□□ 0.44
SFXN3-201ENST00000224807 K7ELQ4 463 aaPredicted RBP17.8■□□□□ 0.44
SFXN3-201ENST00000224807 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
SFXN3-201ENST00000224807 DTNBO60941 627 aa17.8■□□□□ 0.44
SFXN3-201ENST00000224807 WDR63Q8IWG1 891 aa17.8■□□□□ 0.44
SFXN3-201ENST00000224807 SPAG9O60271 1321 aaKnown RBP17.8■□□□□ 0.44
SFXN3-201ENST00000224807 AAMPQ13685 434 aa17.8■□□□□ 0.44
SFXN3-201ENST00000224807 ZSCAN30Q86W11 494 aa17.8■□□□□ 0.44
SFXN3-201ENST00000224807 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
SFXN3-201ENST00000224807 BAG4O95429 457 aaKnown RBP17.79■□□□□ 0.44
SFXN3-201ENST00000224807 RAB3GAP1Q15042 981 aa17.79■□□□□ 0.44
SFXN3-201ENST00000224807 MAP3K4Q9Y6R4 1608 aa17.79■□□□□ 0.44
SFXN3-201ENST00000224807 GGT6Q6P531 493 aa17.78■□□□□ 0.44
SFXN3-201ENST00000224807 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
SFXN3-201ENST00000224807 ZHX1Q9UKY1 873 aaPredicted RBP17.78■□□□□ 0.44
SFXN3-201ENST00000224807 TET3O43151 1660 aa17.78■□□□□ 0.44
SFXN3-201ENST00000224807 UQCRHLA0A096LP55 91 aa17.78■□□□□ 0.44
SFXN3-201ENST00000224807 UQCRHP07919 91 aa17.78■□□□□ 0.44
SFXN3-201ENST00000224807 SHROOM2Q13796 1616 aa17.78■□□□□ 0.44
SFXN3-201ENST00000224807 UGGT1Q9NYU2 1555 aa17.77■□□□□ 0.44
SFXN3-201ENST00000224807 DEPDC5O75140 1603 aa17.77■□□□□ 0.44
SFXN3-201ENST00000224807 SLC24A1O60721 1099 aa17.77■□□□□ 0.44
SFXN3-201ENST00000224807 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
SFXN3-201ENST00000224807 ZGPATQ8N5A5 531 aaKnown RBP17.77■□□□□ 0.44
SFXN3-201ENST00000224807 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.44
SFXN3-201ENST00000224807 PRIM1P49642 420 aaKnown RBP17.77■□□□□ 0.43
SFXN3-201ENST00000224807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.77■□□□□ 0.43
SFXN3-201ENST00000224807 SYCE3A1L190 88 aa17.76■□□□□ 0.43
SFXN3-201ENST00000224807 CCDC173Q0VFZ6 552 aa17.76■□□□□ 0.43
SFXN3-201ENST00000224807 ZFYVE16Q7Z3T8 1539 aa17.76■□□□□ 0.43
SFXN3-201ENST00000224807 RBSNQ9H1K0 784 aa17.76■□□□□ 0.43
SFXN3-201ENST00000224807 MYOM2P54296 1465 aa17.75■□□□□ 0.43
SFXN3-201ENST00000224807 TPM2P07951 284 aa17.75■□□□□ 0.43
SFXN3-201ENST00000224807 SKOR2Q2VWA4 1001 aaPredicted RBP17.75■□□□□ 0.43
SFXN3-201ENST00000224807 RTEL1-TNFRSF6BF6WH68 1400 aa17.75■□□□□ 0.43
SFXN3-201ENST00000224807 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
SFXN3-201ENST00000224807 ZNF830Q96NB3 372 aaPredicted RBP17.74■□□□□ 0.43
SFXN3-201ENST00000224807 PDCL3Q9H2J4 239 aa17.74■□□□□ 0.43
SFXN3-201ENST00000224807 SMC5Q8IY18 1101 aa17.74■□□□□ 0.43
SFXN3-201ENST00000224807 GDPD2Q9HCC8 539 aa17.74■□□□□ 0.43
SFXN3-201ENST00000224807 ZBTB40Q9NUA8 1239 aa17.74■□□□□ 0.43
SFXN3-201ENST00000224807 NUCB1Q02818 461 aa17.73■□□□□ 0.43
SFXN3-201ENST00000224807 OTUD7AQ8TE49 926 aaPredicted RBP17.73■□□□□ 0.43
SFXN3-201ENST00000224807 KIF2CQ99661 725 aa17.73■□□□□ 0.43
SFXN3-201ENST00000224807 MYO3AQ8NEV4 1616 aa17.73■□□□□ 0.43
SFXN3-201ENST00000224807 IPO8O15397 1037 aaKnown RBP17.73■□□□□ 0.43
SFXN3-201ENST00000224807 ZSCAN23Q3MJ62 389 aa17.73■□□□□ 0.43
SFXN3-201ENST00000224807 TSPYL6Q8N831 410 aa17.73■□□□□ 0.43
SFXN3-201ENST00000224807 VWDEQ8N2E2 1590 aa17.72■□□□□ 0.43
SFXN3-201ENST00000224807 NEURL4Q96JN8 1562 aa17.72■□□□□ 0.43
SFXN3-201ENST00000224807 SBNO2Q9Y2G9 1366 aa17.72■□□□□ 0.43
SFXN3-201ENST00000224807 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
SFXN3-201ENST00000224807 CHD1O14646 1710 aa17.71■□□□□ 0.43
SFXN3-201ENST00000224807 TSHZ3Q63HK5 1081 aa17.71■□□□□ 0.43
SFXN3-201ENST00000224807 KANK1Q14678 1352 aa17.71■□□□□ 0.43
SFXN3-201ENST00000224807 MINK1Q8N4C8 1332 aaPredicted RBP17.71■□□□□ 0.43
SFXN3-201ENST00000224807 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
SFXN3-201ENST00000224807 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.71■□□□□ 0.43
SFXN3-201ENST00000224807 TRIM35Q9UPQ4 493 aa17.7■□□□□ 0.42
SFXN3-201ENST00000224807 RBM25P49756 843 aaKnown RBP17.7■□□□□ 0.42
SFXN3-201ENST00000224807 C17orf53Q8N3J3 647 aaPredicted RBP17.7■□□□□ 0.42
SFXN3-201ENST00000224807 NSFL1CQ9UNZ2 370 aaKnown RBP17.7■□□□□ 0.42
SFXN3-201ENST00000224807 ZNF518AQ6AHZ1 1483 aa17.7■□□□□ 0.42
SFXN3-201ENST00000224807 ZCCHC11Q5TAX3 1644 aaKnown RBP17.7■□□□□ 0.42
SFXN3-201ENST00000224807 DCTN1Q14203 1278 aa17.69■□□□□ 0.42
SFXN3-201ENST00000224807 IFT172Q9UG01 1749 aa17.69■□□□□ 0.42
SFXN3-201ENST00000224807 SOX12O15370 315 aa17.68■□□□□ 0.42
SFXN3-201ENST00000224807 OFD1O75665 1012 aa17.68■□□□□ 0.42
SFXN3-201ENST00000224807 PRKAR2BP31323 418 aa17.68■□□□□ 0.42
SFXN3-201ENST00000224807 MROH2AA6NES4 1674 aa17.68■□□□□ 0.42
SFXN3-201ENST00000224807 KIF1BO60333 1816 aa17.67■□□□□ 0.42
SFXN3-201ENST00000224807 KLHL40Q2TBA0 621 aa17.67■□□□□ 0.42
SFXN3-201ENST00000224807 AK9Q5TCS8 1911 aa17.67■□□□□ 0.42
SFXN3-201ENST00000224807 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
SFXN3-201ENST00000224807 SNX21Q969T3 373 aa17.67■□□□□ 0.42
SFXN3-201ENST00000224807 NRXN1Q9ULB1 1477 aa17.67■□□□□ 0.42
SFXN3-201ENST00000224807 IGSF3O75054 1194 aa17.66■□□□□ 0.42
SFXN3-201ENST00000224807 LARP6Q9BRS8 491 aaKnown RBP17.66■□□□□ 0.42
SFXN3-201ENST00000224807 CIZ1Q9ULV3 898 aaPredicted RBP17.66■□□□□ 0.42
SFXN3-201ENST00000224807 CDC45O75419 566 aa17.66■□□□□ 0.42
SFXN3-201ENST00000224807 BMP2KLQ5H9B9 411 aa17.66■□□□□ 0.42
SFXN3-201ENST00000224807 MROH1Q8NDA8 1641 aa17.65■□□□□ 0.42
SFXN3-201ENST00000224807 ATP7AQ04656 1500 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms