RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 BRINP3Q76B58 766 aa22.53■■□□□ 1.2
CHMP5-201ENST00000223500 NRKQ7Z2Y5 1582 aa22.52■■□□□ 1.2
CHMP5-201ENST00000223500 MIER1Q8N108 512 aa22.52■■□□□ 1.2
CHMP5-201ENST00000223500 CERKQ8TCT0 537 aa22.52■■□□□ 1.2
CHMP5-201ENST00000223500 NPHP3Q7Z494 1330 aa22.52■■□□□ 1.2
CHMP5-201ENST00000223500 SSH2Q76I76 1423 aa22.51■■□□□ 1.19
CHMP5-201ENST00000223500 FYB1O15117 783 aa22.5■■□□□ 1.19
CHMP5-201ENST00000223500 KRT28Q7Z3Y7 464 aa22.49■■□□□ 1.19
CHMP5-201ENST00000223500 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
CHMP5-201ENST00000223500 PARD3Q8TEW0 1356 aa22.48■■□□□ 1.19
CHMP5-201ENST00000223500 PAK3O75914 559 aaPredicted RBP22.48■■□□□ 1.19
CHMP5-201ENST00000223500 ANKRD26Q9UPS8 1709 aa22.48■■□□□ 1.19
CHMP5-201ENST00000223500 GGNBP2Q9H3C7 697 aa22.47■■□□□ 1.19
CHMP5-201ENST00000223500 NME9Q86XW9 330 aa22.47■■□□□ 1.19
CHMP5-201ENST00000223500 UBAP1LF5GYI3 381 aa22.46■■□□□ 1.19
CHMP5-201ENST00000223500 XPCQ01831 940 aaPredicted RBP22.45■■□□□ 1.18
CHMP5-201ENST00000223500 COG3Q96JB2 828 aa22.45■■□□□ 1.18
CHMP5-201ENST00000223500 ABTB2Q8N961 1025 aa22.44■■□□□ 1.18
CHMP5-201ENST00000223500 MYBBP1AQ9BQG0 1328 aaKnown RBP22.43■■□□□ 1.18
CHMP5-201ENST00000223500 ROBO1Q9Y6N7 1651 aa22.43■■□□□ 1.18
CHMP5-201ENST00000223500 SBNO1A3KN83 1393 aa22.43■■□□□ 1.18
CHMP5-201ENST00000223500 TRPM3Q9HCF6 1732 aaPredicted RBP22.43■■□□□ 1.18
CHMP5-201ENST00000223500 DDX17Q92841 729 aaKnown RBP22.42■■□□□ 1.18
CHMP5-201ENST00000223500 NHSL1Q5SYE7 1610 aa22.42■■□□□ 1.18
CHMP5-201ENST00000223500 CCER2I3L3R5 266 aa22.41■■□□□ 1.18
CHMP5-201ENST00000223500 USP31Q70CQ4 1352 aa22.41■■□□□ 1.18
CHMP5-201ENST00000223500 PXDNQ92626 1479 aa22.41■■□□□ 1.18
CHMP5-201ENST00000223500 NLRP6P59044 892 aa22.41■■□□□ 1.18
CHMP5-201ENST00000223500 PIK3C2AO00443 1686 aa22.4■■□□□ 1.18
CHMP5-201ENST00000223500 ZRANB1Q9UGI0 708 aa22.4■■□□□ 1.18
CHMP5-201ENST00000223500 SOS2Q07890 1332 aaPredicted RBP22.39■■□□□ 1.18
CHMP5-201ENST00000223500 PIP4K2BP78356 416 aa22.39■■□□□ 1.17
CHMP5-201ENST00000223500 LMOD2Q6P5Q4 547 aa22.39■■□□□ 1.17
CHMP5-201ENST00000223500 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
CHMP5-201ENST00000223500 OVOS2A0A0J9YW53 1432 aa22.38■■□□□ 1.17
CHMP5-201ENST00000223500 OVOS2Q6IE36 1432 aa22.38■■□□□ 1.17
CHMP5-201ENST00000223500 TNNT2P45379 298 aaPredicted RBP22.38■■□□□ 1.17
CHMP5-201ENST00000223500 NLRP13Q86W25 1043 aa22.38■■□□□ 1.17
CHMP5-201ENST00000223500 PPP2R1AP30153 589 aa22.37■■□□□ 1.17
CHMP5-201ENST00000223500 TNS3Q68CZ2 1445 aa22.37■■□□□ 1.17
CHMP5-201ENST00000223500 USP54Q70EL1 1684 aa22.36■■□□□ 1.17
CHMP5-201ENST00000223500 AHDC1Q5TGY3 1603 aaPredicted RBP22.36■■□□□ 1.17
CHMP5-201ENST00000223500 SPATA31A3Q5VYP0 1347 aa22.36■■□□□ 1.17
CHMP5-201ENST00000223500 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
CHMP5-201ENST00000223500 ARHGEF10O15013 1369 aa22.36■■□□□ 1.17
CHMP5-201ENST00000223500 NUTM2GQ5VZR2 741 aa22.34■■□□□ 1.17
CHMP5-201ENST00000223500 AATKQ6ZMQ8 1374 aa22.32■■□□□ 1.16
CHMP5-201ENST00000223500 MAP2P11137 1827 aaKnown RBP22.32■■□□□ 1.16
CHMP5-201ENST00000223500 MARF1Q9Y4F3 1742 aaKnown RBP22.31■■□□□ 1.16
CHMP5-201ENST00000223500 LRRC59Q96AG4 307 aaKnown RBP22.31■■□□□ 1.16
CHMP5-201ENST00000223500 MRS2Q9HD23 443 aa22.31■■□□□ 1.16
CHMP5-201ENST00000223500 PHLPP1O60346 1717 aa22.3■■□□□ 1.16
CHMP5-201ENST00000223500 KCNH5Q8NCM2 988 aa22.3■■□□□ 1.16
CHMP5-201ENST00000223500 MTHFSP49914 203 aa22.28■■□□□ 1.16
CHMP5-201ENST00000223500 SOX12O15370 315 aa22.28■■□□□ 1.16
CHMP5-201ENST00000223500 CFAP53Q96M91 514 aa22.28■■□□□ 1.16
CHMP5-201ENST00000223500 USP19O94966 1318 aa22.28■■□□□ 1.16
CHMP5-201ENST00000223500 SLIT3O75094 1523 aa22.26■■□□□ 1.15
CHMP5-201ENST00000223500 POLKQ9UBT6 870 aa22.26■■□□□ 1.15
CHMP5-201ENST00000223500 GCP02774 474 aa22.25■■□□□ 1.15
CHMP5-201ENST00000223500 FBLN1P23142 703 aa22.25■■□□□ 1.15
CHMP5-201ENST00000223500 PLEKHG5O94827 1062 aa22.24■■□□□ 1.15
CHMP5-201ENST00000223500 CCDC184Q52MB2 194 aa22.24■■□□□ 1.15
CHMP5-201ENST00000223500 MED1Q15648 1581 aaPredicted RBP22.24■■□□□ 1.15
CHMP5-201ENST00000223500 PPM1GO15355 546 aaPredicted RBP22.23■■□□□ 1.15
CHMP5-201ENST00000223500 RRS1Q15050 365 aaKnown RBP22.23■■□□□ 1.15
CHMP5-201ENST00000223500 COL16A1Q07092 1604 aaPredicted RBP22.23■■□□□ 1.15
CHMP5-201ENST00000223500 SMG6Q86US8 1419 aaKnown RBP22.22■■□□□ 1.15
CHMP5-201ENST00000223500 EMILIN1Q9Y6C2 1016 aa22.22■■□□□ 1.15
CHMP5-201ENST00000223500 PHRF1Q9P1Y6 1649 aaKnown RBP22.21■■□□□ 1.15
CHMP5-201ENST00000223500 NFAT5O94916 1531 aa22.21■■□□□ 1.15
CHMP5-201ENST00000223500 KIF24Q5T7B8 1368 aa22.2■■□□□ 1.14
CHMP5-201ENST00000223500 MAP3K19Q56UN5 1328 aa22.2■■□□□ 1.14
CHMP5-201ENST00000223500 AMPHP49418 695 aa22.2■■□□□ 1.14
CHMP5-201ENST00000223500 HAP1P54257 671 aaPredicted RBP22.2■■□□□ 1.14
CHMP5-201ENST00000223500 CDK12Q9NYV4 1490 aaPredicted RBP22.19■■□□□ 1.14
CHMP5-201ENST00000223500 LTN1O94822 1766 aa22.19■■□□□ 1.14
CHMP5-201ENST00000223500 CABLES1Q8TDN4 633 aa22.19■■□□□ 1.14
CHMP5-201ENST00000223500 CRYBG1Q9Y4K1 1723 aa22.19■■□□□ 1.14
CHMP5-201ENST00000223500 INSRP06213 1382 aa22.18■■□□□ 1.14
CHMP5-201ENST00000223500 PNPLA6Q8IY17 1366 aa22.18■■□□□ 1.14
CHMP5-201ENST00000223500 FLT4P35916 1363 aa22.17■■□□□ 1.14
CHMP5-201ENST00000223500 COL22A1Q8NFW1 1626 aaPredicted RBP22.16■■□□□ 1.14
CHMP5-201ENST00000223500 ARHGEF25Q86VW2 580 aa22.16■■□□□ 1.14
CHMP5-201ENST00000223500 PNISRQ8TF01 805 aaKnown RBP22.16■■□□□ 1.14
CHMP5-201ENST00000223500 RTL1A6NKG5 1358 aa22.16■■□□□ 1.14
CHMP5-201ENST00000223500 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
CHMP5-201ENST00000223500 NUDCQ9Y266 331 aa22.15■■□□□ 1.14
CHMP5-201ENST00000223500 ZBTB7CA1YPR0 619 aa22.15■■□□□ 1.14
CHMP5-201ENST00000223500 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
CHMP5-201ENST00000223500 ZC3H6P61129 1189 aaKnown RBP22.15■■□□□ 1.14
CHMP5-201ENST00000223500 ABCA3Q99758 1704 aa22.14■■□□□ 1.14
CHMP5-201ENST00000223500 PEAK1Q9H792 1746 aa22.14■■□□□ 1.13
CHMP5-201ENST00000223500 FAM9BQ8IZU0 186 aa22.14■■□□□ 1.13
CHMP5-201ENST00000223500 IP6K1Q92551 441 aa22.13■■□□□ 1.13
CHMP5-201ENST00000223500 CPDO75976 1380 aa22.12■■□□□ 1.13
CHMP5-201ENST00000223500 JCADQ9P266 1359 aa22.12■■□□□ 1.13
CHMP5-201ENST00000223500 HOXC9P31274 260 aa22.12■■□□□ 1.13
CHMP5-201ENST00000223500 COL3A1P02461 1466 aaPredicted RBP22.12■■□□□ 1.13
CHMP5-201ENST00000223500 SHPRHQ149N8 1683 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms