RNA–Protein interactions for RNA: ENST00000223215.8

MEST-201, mesoderm specific transcript, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MEST, Length 2,465 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-201ENST00000223215 SIRT1Q96EB6 747 aa23.75■■□□□ 1.39
MEST-201ENST00000223215 DIAPH1O60610 1272 aaKnown RBP23.74■■□□□ 1.39
MEST-201ENST00000223215 ATP7BP35670 1465 aa23.73■■□□□ 1.39
MEST-201ENST00000223215 TECPR2O15040 1411 aa23.73■■□□□ 1.39
MEST-201ENST00000223215 NGEFQ8N5V2 710 aa23.73■■□□□ 1.39
MEST-201ENST00000223215 POLKQ9UBT6 870 aa23.72■■□□□ 1.39
MEST-201ENST00000223215 NKTRP30414 1462 aaKnown RBP23.72■■□□□ 1.39
MEST-201ENST00000223215 PTPRUQ92729 1446 aa23.71■■□□□ 1.39
MEST-201ENST00000223215 EMILIN1Q9Y6C2 1016 aa23.71■■□□□ 1.39
MEST-201ENST00000223215 CPSF1Q10570 1443 aaKnown RBP23.7■■□□□ 1.38
MEST-201ENST00000223215 KIF20BQ96Q89 1820 aa23.7■■□□□ 1.38
MEST-201ENST00000223215 CPS1P31327 1500 aa23.69■■□□□ 1.38
MEST-201ENST00000223215 MED14O60244 1454 aa23.69■■□□□ 1.38
MEST-201ENST00000223215 NPM2Q86SE8 214 aaKnown RBP23.69■■□□□ 1.38
MEST-201ENST00000223215 MAPK8IP3Q9UPT6 1336 aa23.69■■□□□ 1.38
MEST-201ENST00000223215 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
MEST-201ENST00000223215 KNDC1Q76NI1 1749 aa23.68■■□□□ 1.38
MEST-201ENST00000223215 RRS1Q15050 365 aaKnown RBP23.68■■□□□ 1.38
MEST-201ENST00000223215 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.68■■□□□ 1.38
MEST-201ENST00000223215 COG3Q96JB2 828 aa23.68■■□□□ 1.38
MEST-201ENST00000223215 PLEKHF1Q96S99 279 aa23.67■■□□□ 1.38
MEST-201ENST00000223215 EDC4Q6P2E9 1401 aaKnown RBP23.67■■□□□ 1.38
MEST-201ENST00000223215 IQSEC2Q5JU85 1478 aa23.67■■□□□ 1.38
MEST-201ENST00000223215 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.66■■□□□ 1.38
MEST-201ENST00000223215 PMFBP1Q8TBY8 1022 aa23.66■■□□□ 1.38
MEST-201ENST00000223215 TBX22Q9Y458 520 aa23.66■■□□□ 1.38
MEST-201ENST00000223215 HMOX1P09601 288 aa23.66■■□□□ 1.38
MEST-201ENST00000223215 ACEP12821 1306 aa23.66■■□□□ 1.38
MEST-201ENST00000223215 COL3A1P02461 1466 aaPredicted RBP23.65■■□□□ 1.38
MEST-201ENST00000223215 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
MEST-201ENST00000223215 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
MEST-201ENST00000223215 NOP58Q9Y2X3 529 aaKnown RBP23.65■■□□□ 1.38
MEST-201ENST00000223215 MAP2P11137 1827 aaKnown RBP23.64■■□□□ 1.38
MEST-201ENST00000223215 SOX12O15370 315 aa23.64■■□□□ 1.37
MEST-201ENST00000223215 TMPOP42166 694 aaKnown RBP23.64■■□□□ 1.37
MEST-201ENST00000223215 ZNF692Q9BU19 519 aaPredicted RBP23.64■■□□□ 1.37
MEST-201ENST00000223215 FRAT1Q92837 279 aaPredicted RBP23.63■■□□□ 1.37
MEST-201ENST00000223215 BCL2L13Q9BXK5 485 aa23.63■■□□□ 1.37
MEST-201ENST00000223215 SLIT1O75093 1534 aa23.63■■□□□ 1.37
MEST-201ENST00000223215 CANXP27824 592 aaKnown RBP23.62■■□□□ 1.37
MEST-201ENST00000223215 ARHGAP23Q9P227 1491 aa23.62■■□□□ 1.37
MEST-201ENST00000223215 RIPK4P57078 832 aa23.62■■□□□ 1.37
MEST-201ENST00000223215 TSR2Q969E8 191 aaKnown RBP23.62■■□□□ 1.37
MEST-201ENST00000223215 PNPLA6Q8IY17 1366 aa23.62■■□□□ 1.37
MEST-201ENST00000223215 CCDC27Q2M243 656 aa23.61■■□□□ 1.37
MEST-201ENST00000223215 RBM33Q96EV2 1170 aaKnown RBP23.61■■□□□ 1.37
MEST-201ENST00000223215 PDE4AP27815 886 aa23.61■■□□□ 1.37
MEST-201ENST00000223215 ANP32AP39687 249 aaKnown RBP23.61■■□□□ 1.37
MEST-201ENST00000223215 CDC42BPGQ6DT37 1551 aa23.61■■□□□ 1.37
MEST-201ENST00000223215 KCNA6P17658 529 aa23.6■■□□□ 1.37
MEST-201ENST00000223215 PRKAR2BP31323 418 aa23.6■■□□□ 1.37
MEST-201ENST00000223215 TRIM35Q9UPQ4 493 aa23.59■■□□□ 1.37
MEST-201ENST00000223215 TCERG1O14776 1098 aaKnown RBP23.59■■□□□ 1.37
MEST-201ENST00000223215 RIMS1Q86UR5 1692 aaKnown RBP23.59■■□□□ 1.37
MEST-201ENST00000223215 NBR1Q14596 966 aa23.58■■□□□ 1.37
MEST-201ENST00000223215 IPO9Q96P70 1041 aaKnown RBP23.58■■□□□ 1.37
MEST-201ENST00000223215 TTC21BQ7Z4L5 1316 aa23.58■■□□□ 1.36
MEST-201ENST00000223215 MYH16Q9H6N6 1097 aa23.57■■□□□ 1.36
MEST-201ENST00000223215 FCHSD2O94868 740 aa23.56■■□□□ 1.36
MEST-201ENST00000223215 NGDNQ8NEJ9 315 aaKnown RBP23.56■■□□□ 1.36
MEST-201ENST00000223215 PHACTR3Q96KR7 559 aa23.56■■□□□ 1.36
MEST-201ENST00000223215 RARSP54136 660 aaKnown RBP23.55■■□□□ 1.36
MEST-201ENST00000223215 PANK1Q8TE04 598 aa23.55■■□□□ 1.36
MEST-201ENST00000223215 ITSN1Q15811 1721 aa23.55■■□□□ 1.36
MEST-201ENST00000223215 PLEKHG3A1L390 1219 aa23.55■■□□□ 1.36
MEST-201ENST00000223215 NEFMP07197 916 aa23.55■■□□□ 1.36
MEST-201ENST00000223215 RSPH6AQ9H0K4 717 aa23.55■■□□□ 1.36
MEST-201ENST00000223215 PNNQ9H307 717 aaKnown RBP23.55■■□□□ 1.36
MEST-201ENST00000223215 IL13P35225 146 aa23.54■■□□□ 1.36
MEST-201ENST00000223215 BACH2Q9BYV9 841 aa23.54■■□□□ 1.36
MEST-201ENST00000223215 ANKLE2Q86XL3 938 aa23.53■■□□□ 1.36
MEST-201ENST00000223215 MON2Q7Z3U7 1717 aa23.53■■□□□ 1.36
MEST-201ENST00000223215 LAS1LQ9Y4W2 734 aaKnown RBP23.53■■□□□ 1.36
MEST-201ENST00000223215 CEP170BQ9Y4F5 1589 aaPredicted RBP23.52■■□□□ 1.36
MEST-201ENST00000223215 COG6Q9Y2V7 657 aa23.52■■□□□ 1.36
MEST-201ENST00000223215 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
MEST-201ENST00000223215 EXOSC9Q06265 439 aaKnown RBP23.52■■□□□ 1.36
MEST-201ENST00000223215 TNNQ9UQP3 1299 aa23.52■■□□□ 1.36
MEST-201ENST00000223215 AKAP12Q02952 1782 aa23.52■■□□□ 1.36
MEST-201ENST00000223215 CLUAP1Q96AJ1 413 aa23.51■■□□□ 1.35
MEST-201ENST00000223215 ZBTB47Q9UFB7 747 aaPredicted RBP23.51■■□□□ 1.35
MEST-201ENST00000223215 THUMPD2Q9BTF0 503 aaKnown RBP23.5■■□□□ 1.35
MEST-201ENST00000223215 USP6P35125 1406 aa23.49■■□□□ 1.35
MEST-201ENST00000223215 LRRC7Q96NW7 1537 aa23.49■■□□□ 1.35
MEST-201ENST00000223215 AATKQ6ZMQ8 1374 aa23.48■■□□□ 1.35
MEST-201ENST00000223215 RGPD8O14715 1765 aaPredicted RBP23.48■■□□□ 1.35
MEST-201ENST00000223215 KDM2BQ8NHM5 1336 aa23.48■■□□□ 1.35
MEST-201ENST00000223215 NUTM2GQ5VZR2 741 aa23.48■■□□□ 1.35
MEST-201ENST00000223215 PTCH1Q13635 1447 aa23.47■■□□□ 1.35
MEST-201ENST00000223215 NCBP3Q53F19 620 aaKnown RBP23.47■■□□□ 1.35
MEST-201ENST00000223215 HSP90AB2PQ58FF8 381 aa23.46■■□□□ 1.35
MEST-201ENST00000223215 MS4A1P11836 297 aa23.44■■□□□ 1.34
MEST-201ENST00000223215 PDE3AQ14432 1141 aa23.44■■□□□ 1.34
MEST-201ENST00000223215 DIP2AQ14689 1571 aa23.44■■□□□ 1.34
MEST-201ENST00000223215 CDK12Q9NYV4 1490 aaPredicted RBP23.44■■□□□ 1.34
MEST-201ENST00000223215 RLBP1P12271 317 aa23.44■■□□□ 1.34
MEST-201ENST00000223215 AEBP1Q8IUX7 1158 aa23.44■■□□□ 1.34
MEST-201ENST00000223215 DNAJC5Q9H3Z4 198 aa23.44■■□□□ 1.34
MEST-201ENST00000223215 TOPAZ1Q8N9V7 1692 aa23.43■■□□□ 1.34
MEST-201ENST00000223215 EIF4A2Q14240 407 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms