RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 TMEM87AQ8NBN3 555 aa12.63□□□□□ -0.39
TRPS1-201ENST00000220888 LNPKQ9C0E8 428 aa12.63□□□□□ -0.39
TRPS1-201ENST00000220888 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
TRPS1-201ENST00000220888 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
TRPS1-201ENST00000220888 PRAM1Q96QH2 718 aa12.62□□□□□ -0.39
TRPS1-201ENST00000220888 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
TRPS1-201ENST00000220888 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
TRPS1-201ENST00000220888 RRP1P56182 461 aaKnown RBP12.62□□□□□ -0.39
TRPS1-201ENST00000220888 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
TRPS1-201ENST00000220888 ZSCAN25Q6NSZ9 544 aa12.61□□□□□ -0.39
TRPS1-201ENST00000220888 TRIM21P19474 475 aaKnown RBP12.61□□□□□ -0.39
TRPS1-201ENST00000220888 PDILTQ8N807 584 aa12.61□□□□□ -0.39
TRPS1-201ENST00000220888 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.61□□□□□ -0.39
TRPS1-201ENST00000220888 ZPR1O75312 459 aa12.61□□□□□ -0.39
TRPS1-201ENST00000220888 NEBLO76041 1014 aa12.61□□□□□ -0.39
TRPS1-201ENST00000220888 IGHMBP2P38935 993 aaKnown RBP12.61□□□□□ -0.39
TRPS1-201ENST00000220888 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
TRPS1-201ENST00000220888 DESP17661 470 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 ZNF76P36508 570 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 PIP4K2AP48426 406 aaPredicted RBP12.6□□□□□ -0.39
TRPS1-201ENST00000220888 PPM1FP49593 454 aaPredicted RBP12.6□□□□□ -0.39
TRPS1-201ENST00000220888 STK11IPQ8N1F8 1099 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 SLC26A8Q96RN1 970 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 NUCB2P80303 420 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 VSIG10Q8N0Z9 540 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 CAGE1Q8TC20 777 aa12.6□□□□□ -0.39
TRPS1-201ENST00000220888 STARD3NLO95772 234 aa12.59□□□□□ -0.39
TRPS1-201ENST00000220888 MYL6BP14649 208 aa12.59□□□□□ -0.39
TRPS1-201ENST00000220888 PRKAR2BP31323 418 aa12.59□□□□□ -0.39
TRPS1-201ENST00000220888 MATR3P43243 847 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRPS1-201ENST00000220888 FILIP1LQ4L180 1135 aa12.59□□□□□ -0.39
TRPS1-201ENST00000220888 RAI14Q9P0K7 980 aa12.59□□□□□ -0.39
TRPS1-201ENST00000220888 ACBD3Q9H3P7 528 aa12.59□□□□□ -0.39
TRPS1-201ENST00000220888 PRKRIP1Q9H875 184 aaPredicted RBP12.59□□□□□ -0.39
TRPS1-201ENST00000220888 CHMP5Q9NZZ3 219 aa12.59□□□□□ -0.39
TRPS1-201ENST00000220888 CDC45O75419 566 aa12.59□□□□□ -0.39
TRPS1-201ENST00000220888 CHMP4BP1P59074 171 aa12.58□□□□□ -0.39
TRPS1-201ENST00000220888 NGLY1Q96IV0 654 aa12.58□□□□□ -0.39
TRPS1-201ENST00000220888 SCLT1Q96NL6 688 aa12.58□□□□□ -0.39
TRPS1-201ENST00000220888 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
TRPS1-201ENST00000220888 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
TRPS1-201ENST00000220888 ARHGAP5Q13017 1502 aa12.58□□□□□ -0.4
TRPS1-201ENST00000220888 MNS1Q8NEH6 495 aa12.58□□□□□ -0.4
TRPS1-201ENST00000220888 FYCO1Q9BQS8 1478 aa12.58□□□□□ -0.4
TRPS1-201ENST00000220888 RRBP1Q9P2E9 1410 aaKnown RBP12.58□□□□□ -0.4
TRPS1-201ENST00000220888 DNAI2Q9GZS0 605 aa12.58□□□□□ -0.4
TRPS1-201ENST00000220888 ADAMTS2O95450 1211 aa12.57□□□□□ -0.4
TRPS1-201ENST00000220888 XPCQ01831 940 aaPredicted RBP12.57□□□□□ -0.4
TRPS1-201ENST00000220888 WDR78Q5VTH9 848 aa12.57□□□□□ -0.4
TRPS1-201ENST00000220888 CCDC97Q96F63 343 aaPredicted RBP12.57□□□□□ -0.4
TRPS1-201ENST00000220888 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
TRPS1-201ENST00000220888 ZC3H6P61129 1189 aaKnown RBP12.57□□□□□ -0.4
TRPS1-201ENST00000220888 ATAD2BQ9ULI0 1458 aa12.57□□□□□ -0.4
TRPS1-201ENST00000220888 GNAI2P04899 355 aa12.57□□□□□ -0.4
TRPS1-201ENST00000220888 CFAP70Q5T0N1 1121 aa12.57□□□□□ -0.4
TRPS1-201ENST00000220888 SULT6B1Q6IMI4 303 aa12.57□□□□□ -0.4
TRPS1-201ENST00000220888 NUP133Q8WUM0 1156 aa12.57□□□□□ -0.4
TRPS1-201ENST00000220888 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
TRPS1-201ENST00000220888 SMARCE1Q969G3 411 aa12.57□□□□□ -0.4
TRPS1-201ENST00000220888 PDE4AP27815 886 aa12.56□□□□□ -0.4
TRPS1-201ENST00000220888 SIL1Q9H173 461 aa12.56□□□□□ -0.4
TRPS1-201ENST00000220888 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
TRPS1-201ENST00000220888 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
TRPS1-201ENST00000220888 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
TRPS1-201ENST00000220888 SLC52A1Q9NWF4 448 aa12.56□□□□□ -0.4
TRPS1-201ENST00000220888 LRP2BPQ9P2M1 347 aa12.56□□□□□ -0.4
TRPS1-201ENST00000220888 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
TRPS1-201ENST00000220888 JMYQ8N9B5 988 aa12.56□□□□□ -0.4
TRPS1-201ENST00000220888 KINO60870 393 aaKnown RBP12.56□□□□□ -0.4
TRPS1-201ENST00000220888 TDO2P48775 406 aa12.56□□□□□ -0.4
TRPS1-201ENST00000220888 AAMPQ13685 434 aa12.56□□□□□ -0.4
TRPS1-201ENST00000220888 STIM1Q13586 685 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 ZNF396Q96N95 335 aaPredicted RBP12.55□□□□□ -0.4
TRPS1-201ENST00000220888 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 DMRT2Q9Y5R5 561 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 PDCP20941 246 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 STK38Q15208 465 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 TTLL5Q6EMB2 1281 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRPS1-201ENST00000220888 NEFHP12036 1026 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRPS1-201ENST00000220888 TNIP1Q15025 636 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 ZRSR2Q15696 482 aaKnown RBP12.55□□□□□ -0.4
TRPS1-201ENST00000220888 UBAC1Q9BSL1 405 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 NOL7Q9UMY1 257 aaKnown RBP12.55□□□□□ -0.4
TRPS1-201ENST00000220888 TEX35Q5T0J7 233 aa12.55□□□□□ -0.4
TRPS1-201ENST00000220888 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
TRPS1-201ENST00000220888 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
TRPS1-201ENST00000220888 ZNF287Q9HBT7 754 aa12.54□□□□□ -0.4
TRPS1-201ENST00000220888 BRPF1P55201 1214 aaPredicted RBP12.54□□□□□ -0.4
TRPS1-201ENST00000220888 ARGLU1Q9NWB6 273 aaPredicted RBP12.54□□□□□ -0.4
TRPS1-201ENST00000220888 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
TRPS1-201ENST00000220888 HSP90B2PQ58FF3 399 aa12.54□□□□□ -0.4
TRPS1-201ENST00000220888 TANGO6Q9C0B7 1094 aa12.54□□□□□ -0.4
TRPS1-201ENST00000220888 LUC7LQ9NQ29 371 aaKnown RBP12.54□□□□□ -0.4
TRPS1-201ENST00000220888 ZNHIT6Q9NWK9 470 aaKnown RBP12.54□□□□□ -0.4
TRPS1-201ENST00000220888 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms