RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 LETM1O95202 739 aaPredicted RBP17.88■□□□□ 0.45
NDFIP2-201ENST00000218652 AXDND1Q5T1B0 1012 aaPredicted RBP17.88■□□□□ 0.45
NDFIP2-201ENST00000218652 AKNAQ7Z591 1439 aa17.88■□□□□ 0.45
NDFIP2-201ENST00000218652 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
NDFIP2-201ENST00000218652 NOB1Q9ULX3 412 aaKnown RBP17.87■□□□□ 0.45
NDFIP2-201ENST00000218652 NINLQ9Y2I6 1382 aa17.87■□□□□ 0.45
NDFIP2-201ENST00000218652 TSPYL1Q9H0U9 437 aa17.87■□□□□ 0.45
NDFIP2-201ENST00000218652 CCDC66A2RUB6 948 aa17.87■□□□□ 0.45
NDFIP2-201ENST00000218652 STK3Q13188 491 aa17.87■□□□□ 0.45
NDFIP2-201ENST00000218652 NBPF1Q3BBV0 1214 aa17.87■□□□□ 0.45
NDFIP2-201ENST00000218652 GRPEL1Q9HAV7 217 aa17.86■□□□□ 0.45
NDFIP2-201ENST00000218652 CCDC30Q5VVM6 783 aa17.86■□□□□ 0.45
NDFIP2-201ENST00000218652 RBM33Q96EV2 1170 aaKnown RBP17.86■□□□□ 0.45
NDFIP2-201ENST00000218652 SART3Q15020 963 aaKnown RBP17.86■□□□□ 0.45
NDFIP2-201ENST00000218652 FAM177A1Q8N128 213 aaPredicted RBP17.86■□□□□ 0.45
NDFIP2-201ENST00000218652 ERCC4Q92889 916 aaPredicted RBP17.86■□□□□ 0.45
NDFIP2-201ENST00000218652 GCC1Q96CN9 775 aa17.86■□□□□ 0.45
NDFIP2-201ENST00000218652 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
NDFIP2-201ENST00000218652 FILIP1LQ4L180 1135 aa17.86■□□□□ 0.45
NDFIP2-201ENST00000218652 CYB5RLQ6IPT4 315 aa17.85■□□□□ 0.45
NDFIP2-201ENST00000218652 SLC12A5Q9H2X9 1139 aa17.85■□□□□ 0.45
NDFIP2-201ENST00000218652 ESPNB1AK53 854 aa17.85■□□□□ 0.45
NDFIP2-201ENST00000218652 CWC15Q9P013 229 aaKnown RBP17.85■□□□□ 0.45
NDFIP2-201ENST00000218652 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
NDFIP2-201ENST00000218652 CCDC192P0DO97 292 aa17.84■□□□□ 0.45
NDFIP2-201ENST00000218652 CCDC191Q8NCU4 936 aa17.84■□□□□ 0.45
NDFIP2-201ENST00000218652 SERPINC1P01008 464 aa17.84■□□□□ 0.45
NDFIP2-201ENST00000218652 GNAI2P04899 355 aa17.84■□□□□ 0.45
NDFIP2-201ENST00000218652 ME1P48163 572 aa17.84■□□□□ 0.45
NDFIP2-201ENST00000218652 PNISRQ8TF01 805 aaKnown RBP17.84■□□□□ 0.45
NDFIP2-201ENST00000218652 MCM4P33991 863 aa17.84■□□□□ 0.45
NDFIP2-201ENST00000218652 CCDC112Q8NEF3 446 aa17.84■□□□□ 0.45
NDFIP2-201ENST00000218652 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
NDFIP2-201ENST00000218652 CCDC184Q52MB2 194 aa17.83■□□□□ 0.45
NDFIP2-201ENST00000218652 STAC3Q96MF2 364 aa17.83■□□□□ 0.45
NDFIP2-201ENST00000218652 IKQ13123 557 aaPredicted RBP17.83■□□□□ 0.44
NDFIP2-201ENST00000218652 MYOM3Q5VTT5 1437 aa17.83■□□□□ 0.44
NDFIP2-201ENST00000218652 K7ELQ4 463 aaPredicted RBP17.83■□□□□ 0.44
NDFIP2-201ENST00000218652 DCTN1Q14203 1278 aa17.83■□□□□ 0.44
NDFIP2-201ENST00000218652 FILIP1Q7Z7B0 1213 aa17.83■□□□□ 0.44
NDFIP2-201ENST00000218652 CYP46A1Q9Y6A2 500 aa17.83■□□□□ 0.44
NDFIP2-201ENST00000218652 TNMDQ9H2S6 317 aa17.82■□□□□ 0.44
NDFIP2-201ENST00000218652 CT47B1P0C2W7 299 aaPredicted RBP17.82■□□□□ 0.44
NDFIP2-201ENST00000218652 HDGFL1Q5TGJ6 251 aa17.82■□□□□ 0.44
NDFIP2-201ENST00000218652 LARP1BQ659C4 914 aaKnown RBP17.82■□□□□ 0.44
NDFIP2-201ENST00000218652 CALRP27797 417 aaKnown RBP17.81■□□□□ 0.44
NDFIP2-201ENST00000218652 KRT85P78386 507 aa17.81■□□□□ 0.44
NDFIP2-201ENST00000218652 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
NDFIP2-201ENST00000218652 SMARCE1Q969G3 411 aa17.81■□□□□ 0.44
NDFIP2-201ENST00000218652 CWC22Q9HCG8 908 aaKnown RBP17.81■□□□□ 0.44
NDFIP2-201ENST00000218652 ZNF396Q96N95 335 aaPredicted RBP17.81■□□□□ 0.44
NDFIP2-201ENST00000218652 SIL1Q9H173 461 aa17.81■□□□□ 0.44
NDFIP2-201ENST00000218652 WDR33Q9C0J8 1336 aaKnown RBP17.81■□□□□ 0.44
NDFIP2-201ENST00000218652 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
NDFIP2-201ENST00000218652 PKNOX2Q96KN3 472 aa17.8■□□□□ 0.44
NDFIP2-201ENST00000218652 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
NDFIP2-201ENST00000218652 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.8■□□□□ 0.44
NDFIP2-201ENST00000218652 LEKR1Q6ZMV7 388 aa17.79■□□□□ 0.44
NDFIP2-201ENST00000218652 FGD6Q6ZV73 1430 aa17.79■□□□□ 0.44
NDFIP2-201ENST00000218652 SULT6B1Q6IMI4 303 aa17.79■□□□□ 0.44
NDFIP2-201ENST00000218652 GAS2L2Q8NHY3 880 aa17.79■□□□□ 0.44
NDFIP2-201ENST00000218652 JMYQ8N9B5 988 aa17.79■□□□□ 0.44
NDFIP2-201ENST00000218652 HIP1O00291 1037 aa17.78■□□□□ 0.44
NDFIP2-201ENST00000218652 RDXP35241 583 aaKnown RBP17.78■□□□□ 0.44
NDFIP2-201ENST00000218652 TXLNAP40222 546 aa17.78■□□□□ 0.44
NDFIP2-201ENST00000218652 ANKRD50Q9ULJ7 1429 aa17.78■□□□□ 0.44
NDFIP2-201ENST00000218652 ABTB2Q8N961 1025 aa17.78■□□□□ 0.44
NDFIP2-201ENST00000218652 MAGEC2Q9UBF1 373 aaPredicted RBP17.78■□□□□ 0.44
NDFIP2-201ENST00000218652 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.44
NDFIP2-201ENST00000218652 LRRCC1Q9C099 1032 aa17.77■□□□□ 0.44
NDFIP2-201ENST00000218652 UQCRHLA0A096LP55 91 aa17.77■□□□□ 0.43
NDFIP2-201ENST00000218652 CCP110O43303 1012 aa17.77■□□□□ 0.43
NDFIP2-201ENST00000218652 UQCRHP07919 91 aa17.77■□□□□ 0.43
NDFIP2-201ENST00000218652 CDK5RAP3Q96JB5 506 aa17.77■□□□□ 0.43
NDFIP2-201ENST00000218652 ZNHIT6Q9NWK9 470 aaKnown RBP17.77■□□□□ 0.43
NDFIP2-201ENST00000218652 MIA2Q96PC5 1412 aa17.77■□□□□ 0.43
NDFIP2-201ENST00000218652 AFAP1Q8N556 730 aa17.76■□□□□ 0.43
NDFIP2-201ENST00000218652 UBE2Q2Q8WVN8 375 aa17.76■□□□□ 0.43
NDFIP2-201ENST00000218652 IL1RAPL2Q9NP60 686 aa17.76■□□□□ 0.43
NDFIP2-201ENST00000218652 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
NDFIP2-201ENST00000218652 CCAR1Q8IX12 1150 aaKnown RBP17.76■□□□□ 0.43
NDFIP2-201ENST00000218652 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
NDFIP2-201ENST00000218652 MVPQ14764 893 aaKnown RBP17.76■□□□□ 0.43
NDFIP2-201ENST00000218652 PPFIBP1Q86W92 1011 aa17.76■□□□□ 0.43
NDFIP2-201ENST00000218652 PLCD4Q9BRC7 762 aa17.75■□□□□ 0.43
NDFIP2-201ENST00000218652 BLOC1S2Q6QNY1 142 aa17.75■□□□□ 0.43
NDFIP2-201ENST00000218652 KRT18P05783 430 aaKnown RBP17.75■□□□□ 0.43
NDFIP2-201ENST00000218652 NEFHP12036 1026 aa17.74■□□□□ 0.43
NDFIP2-201ENST00000218652 SRCIN1Q9C0H9 1055 aa17.74■□□□□ 0.43
NDFIP2-201ENST00000218652 SKAP1Q86WV1 359 aa17.74■□□□□ 0.43
NDFIP2-201ENST00000218652 ERC1Q8IUD2 1116 aa17.74■□□□□ 0.43
NDFIP2-201ENST00000218652 FERMT3Q86UX7 667 aa17.74■□□□□ 0.43
NDFIP2-201ENST00000218652 HSP90AB3PQ58FF7 597 aa17.73■□□□□ 0.43
NDFIP2-201ENST00000218652 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
NDFIP2-201ENST00000218652 ZHX3Q9H4I2 956 aa17.73■□□□□ 0.43
NDFIP2-201ENST00000218652 TRIM22Q8IYM9 498 aa17.73■□□□□ 0.43
NDFIP2-201ENST00000218652 SPATA32Q96LK8 384 aa17.73■□□□□ 0.43
NDFIP2-201ENST00000218652 RBM42Q9BTD8 480 aaKnown RBP17.73■□□□□ 0.43
NDFIP2-201ENST00000218652 CNNM1Q9NRU3 951 aa17.73■□□□□ 0.43
NDFIP2-201ENST00000218652 MYO6Q9UM54 1294 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms