RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 BRINP3Q76B58 766 aa16.94■□□□□ 0.3
RIPK3-201ENST00000216274 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
RIPK3-201ENST00000216274 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
RIPK3-201ENST00000216274 RRP1P56182 461 aaKnown RBP16.94■□□□□ 0.3
RIPK3-201ENST00000216274 PHLPP1O60346 1717 aa16.93■□□□□ 0.3
RIPK3-201ENST00000216274 NHSL1Q5SYE7 1610 aa16.93■□□□□ 0.3
RIPK3-201ENST00000216274 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
RIPK3-201ENST00000216274 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
RIPK3-201ENST00000216274 COL16A1Q07092 1604 aaPredicted RBP16.91■□□□□ 0.3
RIPK3-201ENST00000216274 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
RIPK3-201ENST00000216274 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
RIPK3-201ENST00000216274 ANKARQ7Z5J8 1434 aa16.9■□□□□ 0.3
RIPK3-201ENST00000216274 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
RIPK3-201ENST00000216274 KIF1AQ12756 1690 aa16.89■□□□□ 0.29
RIPK3-201ENST00000216274 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
RIPK3-201ENST00000216274 ZNF521Q96K83 1311 aa16.88■□□□□ 0.29
RIPK3-201ENST00000216274 SRPK2P78362 688 aaKnown RBP16.88■□□□□ 0.29
RIPK3-201ENST00000216274 GOLGA2Q08379 1002 aa16.86■□□□□ 0.29
RIPK3-201ENST00000216274 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
RIPK3-201ENST00000216274 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
RIPK3-201ENST00000216274 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
RIPK3-201ENST00000216274 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
RIPK3-201ENST00000216274 TERF2IPQ9NYB0 399 aa16.86■□□□□ 0.29
RIPK3-201ENST00000216274 ORAI2Q96SN7 254 aa16.85■□□□□ 0.29
RIPK3-201ENST00000216274 RGPD8O14715 1765 aaPredicted RBP16.85■□□□□ 0.29
RIPK3-201ENST00000216274 JCADQ9P266 1359 aa16.85■□□□□ 0.29
RIPK3-201ENST00000216274 ESCO1Q5FWF5 840 aa16.84■□□□□ 0.29
RIPK3-201ENST00000216274 A0A1W2PP64 1363 aa16.84■□□□□ 0.29
RIPK3-201ENST00000216274 SHPRHQ149N8 1683 aa16.84■□□□□ 0.29
RIPK3-201ENST00000216274 NPHP3Q7Z494 1330 aa16.84■□□□□ 0.29
RIPK3-201ENST00000216274 ITSN1Q15811 1721 aa16.83■□□□□ 0.28
RIPK3-201ENST00000216274 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.28
RIPK3-201ENST00000216274 SOS2Q07890 1332 aaPredicted RBP16.83■□□□□ 0.28
RIPK3-201ENST00000216274 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
RIPK3-201ENST00000216274 APAF1O14727 1248 aa16.82■□□□□ 0.28
RIPK3-201ENST00000216274 DUSP27Q5VZP5 1158 aa16.82■□□□□ 0.28
RIPK3-201ENST00000216274 HDGFL2Q7Z4V5 671 aaPredicted RBP16.82■□□□□ 0.28
RIPK3-201ENST00000216274 SLFN5Q08AF3 891 aa16.81■□□□□ 0.28
RIPK3-201ENST00000216274 LRRC59Q96AG4 307 aaKnown RBP16.81■□□□□ 0.28
RIPK3-201ENST00000216274 CDK19Q9BWU1 502 aa16.81■□□□□ 0.28
RIPK3-201ENST00000216274 ATP7BP35670 1465 aa16.8■□□□□ 0.28
RIPK3-201ENST00000216274 NUTM2FA1L443 756 aa16.8■□□□□ 0.28
RIPK3-201ENST00000216274 TNNT2P45379 298 aaPredicted RBP16.8■□□□□ 0.28
RIPK3-201ENST00000216274 ANKRD26Q9UPS8 1709 aa16.8■□□□□ 0.28
RIPK3-201ENST00000216274 PXDNQ92626 1479 aa16.8■□□□□ 0.28
RIPK3-201ENST00000216274 MTHFSP49914 203 aa16.8■□□□□ 0.28
RIPK3-201ENST00000216274 PHF8Q9UPP1 1060 aa16.8■□□□□ 0.28
RIPK3-201ENST00000216274 MED1Q15648 1581 aaPredicted RBP16.79■□□□□ 0.28
RIPK3-201ENST00000216274 E9PSI1 815 aa16.79■□□□□ 0.28
RIPK3-201ENST00000216274 TRMT2AQ8IZ69 625 aaKnown RBP16.79■□□□□ 0.28
RIPK3-201ENST00000216274 TOPAZ1Q8N9V7 1692 aa16.79■□□□□ 0.28
RIPK3-201ENST00000216274 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
RIPK3-201ENST00000216274 SPATA31A6Q5VVP1 1343 aa16.78■□□□□ 0.28
RIPK3-201ENST00000216274 PRR36Q9H6K5 1346 aa16.78■□□□□ 0.28
RIPK3-201ENST00000216274 CD163L1Q9NR16 1453 aa16.78■□□□□ 0.28
RIPK3-201ENST00000216274 EXOC6Q8TAG9 804 aa16.78■□□□□ 0.28
RIPK3-201ENST00000216274 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.77■□□□□ 0.28
RIPK3-201ENST00000216274 FOXO3O43524 673 aa16.76■□□□□ 0.27
RIPK3-201ENST00000216274 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
RIPK3-201ENST00000216274 DDX17Q92841 729 aaKnown RBP16.76■□□□□ 0.27
RIPK3-201ENST00000216274 NUDT16Q96DE0 195 aaKnown RBP16.76■□□□□ 0.27
RIPK3-201ENST00000216274 CCDC61Q9Y6R9 512 aa16.75■□□□□ 0.27
RIPK3-201ENST00000216274 COL22A1Q8NFW1 1626 aaPredicted RBP16.75■□□□□ 0.27
RIPK3-201ENST00000216274 PNPLA6Q8IY17 1366 aa16.75■□□□□ 0.27
RIPK3-201ENST00000216274 KIF20BQ96Q89 1820 aa16.74■□□□□ 0.27
RIPK3-201ENST00000216274 PSME1Q06323 249 aa16.73■□□□□ 0.27
RIPK3-201ENST00000216274 CABP1Q9NZU7 370 aa16.73■□□□□ 0.27
RIPK3-201ENST00000216274 SBNO1A3KN83 1393 aa16.73■□□□□ 0.27
RIPK3-201ENST00000216274 FYB1O15117 783 aa16.72■□□□□ 0.27
RIPK3-201ENST00000216274 GGNBP2Q9H3C7 697 aa16.72■□□□□ 0.27
RIPK3-201ENST00000216274 PLEKHG3A1L390 1219 aa16.72■□□□□ 0.27
RIPK3-201ENST00000216274 TRPM3Q9HCF6 1732 aaPredicted RBP16.71■□□□□ 0.27
RIPK3-201ENST00000216274 PLIN1O60240 522 aa16.71■□□□□ 0.27
RIPK3-201ENST00000216274 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
RIPK3-201ENST00000216274 KRT28Q7Z3Y7 464 aa16.71■□□□□ 0.27
RIPK3-201ENST00000216274 WWC1Q8IX03 1113 aa16.71■□□□□ 0.27
RIPK3-201ENST00000216274 PMFBP1Q8TBY8 1022 aa16.71■□□□□ 0.27
RIPK3-201ENST00000216274 TNS3Q68CZ2 1445 aa16.71■□□□□ 0.26
RIPK3-201ENST00000216274 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
RIPK3-201ENST00000216274 CRBNQ96SW2 442 aa16.7■□□□□ 0.26
RIPK3-201ENST00000216274 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
RIPK3-201ENST00000216274 TCP11L2Q8N4U5 519 aa16.7■□□□□ 0.26
RIPK3-201ENST00000216274 COL3A1P02461 1466 aaPredicted RBP16.7■□□□□ 0.26
RIPK3-201ENST00000216274 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
RIPK3-201ENST00000216274 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
RIPK3-201ENST00000216274 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
RIPK3-201ENST00000216274 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
RIPK3-201ENST00000216274 LRP6O75581 1613 aa16.69■□□□□ 0.26
RIPK3-201ENST00000216274 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
RIPK3-201ENST00000216274 ARHGEF10O15013 1369 aa16.68■□□□□ 0.26
RIPK3-201ENST00000216274 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
RIPK3-201ENST00000216274 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
RIPK3-201ENST00000216274 EDC4Q6P2E9 1401 aaKnown RBP16.68■□□□□ 0.26
RIPK3-201ENST00000216274 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
RIPK3-201ENST00000216274 ALS2Q96Q42 1657 aa16.67■□□□□ 0.26
RIPK3-201ENST00000216274 CPSF1Q10570 1443 aaKnown RBP16.66■□□□□ 0.26
RIPK3-201ENST00000216274 ACEP12821 1306 aa16.66■□□□□ 0.26
RIPK3-201ENST00000216274 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
RIPK3-201ENST00000216274 AKAP12Q02952 1782 aa16.63■□□□□ 0.25
RIPK3-201ENST00000216274 DIAPH1O60610 1272 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms