RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 ONECUT3O60422 494 aaPredicted RBP28.79■■■□□ 2.2
SYNGR1-201ENST00000216155 NGDNQ8NEJ9 315 aaKnown RBP28.76■■■□□ 2.19
SYNGR1-201ENST00000216155 KIAA1210Q9ULL0 1709 aa28.75■■■□□ 2.19
SYNGR1-201ENST00000216155 TOPAZ1Q8N9V7 1692 aa28.75■■■□□ 2.19
SYNGR1-201ENST00000216155 BTG4Q9NY30 223 aa28.75■■■□□ 2.19
SYNGR1-201ENST00000216155 KRT27Q7Z3Y8 459 aa28.73■■■□□ 2.19
SYNGR1-201ENST00000216155 DEFB132Q7Z7B7 95 aa28.72■■■□□ 2.19
SYNGR1-201ENST00000216155 PHRF1Q9P1Y6 1649 aaKnown RBP28.72■■■□□ 2.19
SYNGR1-201ENST00000216155 PAK3O75914 559 aaPredicted RBP28.71■■■□□ 2.19
SYNGR1-201ENST00000216155 NUDT16Q96DE0 195 aaKnown RBP28.71■■■□□ 2.19
SYNGR1-201ENST00000216155 FAM98CQ17RN3 349 aaKnown RBP28.7■■■□□ 2.18
SYNGR1-201ENST00000216155 A0A0G2JS52 829 aa28.68■■■□□ 2.18
SYNGR1-201ENST00000216155 MYT1Q01538 1121 aa28.68■■■□□ 2.18
SYNGR1-201ENST00000216155 SF3B2Q13435 895 aaKnown RBP28.67■■■□□ 2.18
SYNGR1-201ENST00000216155 THSD7AQ9UPZ6 1657 aa28.67■■■□□ 2.18
SYNGR1-201ENST00000216155 CDK19Q9BWU1 502 aa28.66■■■□□ 2.18
SYNGR1-201ENST00000216155 SPATA31A5Q5VU36 1347 aa28.66■■■□□ 2.18
SYNGR1-201ENST00000216155 SPATA31A7Q8IWB4 1347 aa28.66■■■□□ 2.18
SYNGR1-201ENST00000216155 POLR3AO14802 1390 aaPredicted RBP28.65■■■□□ 2.18
SYNGR1-201ENST00000216155 PRDM11Q9NQV5 511 aa28.65■■■□□ 2.18
SYNGR1-201ENST00000216155 KIAA0232Q92628 1395 aa28.63■■■□□ 2.17
SYNGR1-201ENST00000216155 NBPF1Q3BBV0 1214 aa28.61■■■□□ 2.17
SYNGR1-201ENST00000216155 NRKQ7Z2Y5 1582 aa28.61■■■□□ 2.17
SYNGR1-201ENST00000216155 CCDC61Q9Y6R9 512 aa28.6■■■□□ 2.17
SYNGR1-201ENST00000216155 ACEP12821 1306 aa28.6■■■□□ 2.17
SYNGR1-201ENST00000216155 RGPD1P0DJD0 1748 aa28.59■■■□□ 2.17
SYNGR1-201ENST00000216155 CHRNA2Q15822 529 aa28.57■■■□□ 2.16
SYNGR1-201ENST00000216155 NBPF8Q3BBV2 869 aa28.57■■■□□ 2.16
SYNGR1-201ENST00000216155 NUTM2GQ5VZR2 741 aa28.57■■■□□ 2.16
SYNGR1-201ENST00000216155 PLEKHG3A1L390 1219 aa28.56■■■□□ 2.16
SYNGR1-201ENST00000216155 SPATA31A1Q5TZJ5 1347 aa28.55■■■□□ 2.16
SYNGR1-201ENST00000216155 FAM182BQ5T319 152 aa28.55■■■□□ 2.16
SYNGR1-201ENST00000216155 TNS1Q9HBL0 1735 aaKnown RBP28.55■■■□□ 2.16
SYNGR1-201ENST00000216155 QRICH2Q9H0J4 1663 aa28.54■■■□□ 2.16
SYNGR1-201ENST00000216155 BAG6P46379 1132 aa28.54■■■□□ 2.16
SYNGR1-201ENST00000216155 ZC3H6P61129 1189 aaKnown RBP28.54■■■□□ 2.16
SYNGR1-201ENST00000216155 PPIP5K1Q6PFW1 1433 aa28.52■■■□□ 2.16
SYNGR1-201ENST00000216155 LMO7Q8WWI1 1683 aa28.52■■■□□ 2.16
SYNGR1-201ENST00000216155 STRN4Q9NRL3 753 aa28.52■■■□□ 2.16
SYNGR1-201ENST00000216155 LRP5O75197 1615 aa28.51■■■□□ 2.15
SYNGR1-201ENST00000216155 CENPJQ9HC77 1338 aaPredicted RBP28.51■■■□□ 2.15
SYNGR1-201ENST00000216155 SSH2Q76I76 1423 aa28.51■■■□□ 2.15
SYNGR1-201ENST00000216155 USP19O94966 1318 aa28.5■■■□□ 2.15
SYNGR1-201ENST00000216155 DISP2A7MBM2 1401 aa28.49■■■□□ 2.15
SYNGR1-201ENST00000216155 CAMTA1Q9Y6Y1 1673 aa28.48■■■□□ 2.15
SYNGR1-201ENST00000216155 SRPK2P78362 688 aaKnown RBP28.48■■■□□ 2.15
SYNGR1-201ENST00000216155 ABTB2Q8N961 1025 aa28.48■■■□□ 2.15
SYNGR1-201ENST00000216155 CPDO75976 1380 aa28.48■■■□□ 2.15
SYNGR1-201ENST00000216155 CABP2Q9NPB3 220 aa28.47■■■□□ 2.15
SYNGR1-201ENST00000216155 EN1Q05925 392 aaPredicted RBP28.46■■■□□ 2.15
SYNGR1-201ENST00000216155 TRPM1Q7Z4N2 1603 aa28.43■■■□□ 2.14
SYNGR1-201ENST00000216155 PSDA5PKW4 1024 aaPredicted RBP28.43■■■□□ 2.14
SYNGR1-201ENST00000216155 USP35Q9P2H5 1018 aa28.43■■■□□ 2.14
SYNGR1-201ENST00000216155 LARP1Q6PKG0 1096 aaKnown RBP28.41■■■□□ 2.14
SYNGR1-201ENST00000216155 BARGINQ6ZT62 677 aa28.41■■■□□ 2.14
SYNGR1-201ENST00000216155 L3MBTL2Q969R5 705 aa28.41■■■□□ 2.14
SYNGR1-201ENST00000216155 USP6P35125 1406 aa28.41■■■□□ 2.14
SYNGR1-201ENST00000216155 BRD4O60885 1362 aaPredicted RBP28.4■■■□□ 2.14
SYNGR1-201ENST00000216155 EVA1CP58658 441 aa28.4■■■□□ 2.14
SYNGR1-201ENST00000216155 NLRP13Q86W25 1043 aa28.4■■■□□ 2.14
SYNGR1-201ENST00000216155 COL5A2P05997 1499 aaPredicted RBP28.4■■■□□ 2.14
SYNGR1-201ENST00000216155 GCP02774 474 aa28.39■■■□□ 2.14
SYNGR1-201ENST00000216155 FAM196AQ6ZSG2 479 aa28.38■■■□□ 2.13
SYNGR1-201ENST00000216155 SLIT3O75094 1523 aa28.38■■■□□ 2.13
SYNGR1-201ENST00000216155 TRIM37O94972 964 aa28.37■■■□□ 2.13
SYNGR1-201ENST00000216155 PIK3C2AO00443 1686 aa28.37■■■□□ 2.13
SYNGR1-201ENST00000216155 TCP11L2Q8N4U5 519 aa28.36■■■□□ 2.13
SYNGR1-201ENST00000216155 CABP1Q9NZU7 370 aa28.36■■■□□ 2.13
SYNGR1-201ENST00000216155 EZH2Q15910 746 aaKnown RBP28.35■■■□□ 2.13
SYNGR1-201ENST00000216155 PARP4Q9UKK3 1724 aaKnown RBP28.35■■■□□ 2.13
SYNGR1-201ENST00000216155 SIN3AQ96ST3 1273 aa28.33■■■□□ 2.13
SYNGR1-201ENST00000216155 PDE3BQ13370 1112 aa28.32■■■□□ 2.12
SYNGR1-201ENST00000216155 CAMKK2Q96RR4 588 aa28.32■■■□□ 2.12
SYNGR1-201ENST00000216155 RREB1Q92766 1687 aa28.32■■■□□ 2.12
SYNGR1-201ENST00000216155 R3HDM1Q15032 1099 aaKnown RBP28.31■■■□□ 2.12
SYNGR1-201ENST00000216155 THRAP3Q9Y2W1 955 aaKnown RBP28.31■■■□□ 2.12
SYNGR1-201ENST00000216155 EVC2Q86UK5 1308 aa28.31■■■□□ 2.12
SYNGR1-201ENST00000216155 CRB1P82279 1406 aa28.3■■■□□ 2.12
SYNGR1-201ENST00000216155 ROCK2O75116 1388 aaKnown RBP28.3■■■□□ 2.12
SYNGR1-201ENST00000216155 NLRP6P59044 892 aa28.3■■■□□ 2.12
SYNGR1-201ENST00000216155 PARD3Q8TEW0 1356 aa28.29■■■□□ 2.12
SYNGR1-201ENST00000216155 COL18A1P39060 1754 aa28.29■■■□□ 2.12
SYNGR1-201ENST00000216155 AKAP12Q02952 1782 aa28.29■■■□□ 2.12
SYNGR1-201ENST00000216155 AATKQ6ZMQ8 1374 aa28.28■■■□□ 2.12
SYNGR1-201ENST00000216155 APBA3O96018 575 aa28.28■■■□□ 2.12
SYNGR1-201ENST00000216155 NUP188Q5SRE5 1749 aa28.27■■■□□ 2.12
SYNGR1-201ENST00000216155 LRRC37A3O60309 1634 aa28.27■■■□□ 2.12
SYNGR1-201ENST00000216155 ZBTB7CA1YPR0 619 aa28.26■■■□□ 2.11
SYNGR1-201ENST00000216155 PEAK1Q9H792 1746 aa28.25■■■□□ 2.11
SYNGR1-201ENST00000216155 WNK3Q9BYP7 1800 aa28.25■■■□□ 2.11
SYNGR1-201ENST00000216155 NEUROD1Q13562 356 aa28.24■■■□□ 2.11
SYNGR1-201ENST00000216155 CPSF1Q10570 1443 aaKnown RBP28.23■■■□□ 2.11
SYNGR1-201ENST00000216155 TTC21BQ7Z4L5 1316 aa28.2■■■□□ 2.11
SYNGR1-201ENST00000216155 OVOS2A0A0G2JMS6 1433 aa28.2■■■□□ 2.11
SYNGR1-201ENST00000216155 OVOS2A0A0J9YW53 1432 aa28.2■■■□□ 2.11
SYNGR1-201ENST00000216155 OVOS2Q6IE36 1432 aa28.2■■■□□ 2.11
SYNGR1-201ENST00000216155 MON2Q7Z3U7 1717 aa28.18■■■□□ 2.1
SYNGR1-201ENST00000216155 ZNF692Q9BU19 519 aaPredicted RBP28.18■■■□□ 2.1
SYNGR1-201ENST00000216155 AXIN2Q9Y2T1 843 aa28.18■■■□□ 2.1
SYNGR1-201ENST00000216155 NFAT5O94916 1531 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms