RNA–Protein interactions for RNA: ENST00000216014.8

KDELR3-201, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDELR3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-201ENST00000216014 ALS2Q96Q42 1657 aa27.54■■■□□ 2
KDELR3-201ENST00000216014 ZRANB1Q9UGI0 708 aa27.54■■■□□ 2
KDELR3-201ENST00000216014 KIF20BQ96Q89 1820 aa27.54■■■□□ 2
KDELR3-201ENST00000216014 EDC4Q6P2E9 1401 aaKnown RBP27.54■■■□□ 2
KDELR3-201ENST00000216014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.53■■■□□ 2
KDELR3-201ENST00000216014 COL16A1Q07092 1604 aaPredicted RBP27.53■■■□□ 2
KDELR3-201ENST00000216014 NPHP3Q7Z494 1330 aa27.52■■■□□ 2
KDELR3-201ENST00000216014 TTC21BQ7Z4L5 1316 aa27.52■■■□□ 2
KDELR3-201ENST00000216014 SOS2Q07890 1332 aaPredicted RBP27.52■■■□□ 2
KDELR3-201ENST00000216014 ZNF692Q9BU19 519 aaPredicted RBP27.52■■■□□ 2
KDELR3-201ENST00000216014 NME9Q86XW9 330 aa27.5■■□□□ 1.99
KDELR3-201ENST00000216014 AMER1Q5JTC6 1135 aaPredicted RBP27.49■■□□□ 1.99
KDELR3-201ENST00000216014 CNGB1Q14028 1251 aaPredicted RBP27.48■■□□□ 1.99
KDELR3-201ENST00000216014 PAK3O75914 559 aaPredicted RBP27.47■■□□□ 1.99
KDELR3-201ENST00000216014 FYB1O15117 783 aa27.46■■□□□ 1.99
KDELR3-201ENST00000216014 NUTM2GQ5VZR2 741 aa27.46■■□□□ 1.99
KDELR3-201ENST00000216014 ANKRD26Q9UPS8 1709 aa27.45■■□□□ 1.98
KDELR3-201ENST00000216014 GGNBP2Q9H3C7 697 aa27.44■■□□□ 1.98
KDELR3-201ENST00000216014 SBNO1A3KN83 1393 aa27.44■■□□□ 1.98
KDELR3-201ENST00000216014 SPATA31A3Q5VYP0 1347 aa27.44■■□□□ 1.98
KDELR3-201ENST00000216014 TNS3Q68CZ2 1445 aa27.44■■□□□ 1.98
KDELR3-201ENST00000216014 KNSTRNQ9Y448 316 aa27.44■■□□□ 1.98
KDELR3-201ENST00000216014 CRYBG1Q9Y4K1 1723 aa27.43■■□□□ 1.98
KDELR3-201ENST00000216014 USP54Q70EL1 1684 aa27.42■■□□□ 1.98
KDELR3-201ENST00000216014 CC2D1BQ5T0F9 858 aaKnown RBP27.41■■□□□ 1.98
KDELR3-201ENST00000216014 MED1Q15648 1581 aaPredicted RBP27.4■■□□□ 1.98
KDELR3-201ENST00000216014 TTC21AQ8NDW8 1320 aa27.4■■□□□ 1.98
KDELR3-201ENST00000216014 HSPA1LP34931 641 aa27.4■■□□□ 1.98
KDELR3-201ENST00000216014 OVOS2A0A0J9YW53 1432 aa27.4■■□□□ 1.98
KDELR3-201ENST00000216014 OVOS2Q6IE36 1432 aa27.4■■□□□ 1.98
KDELR3-201ENST00000216014 BRD4O60885 1362 aaPredicted RBP27.39■■□□□ 1.98
KDELR3-201ENST00000216014 PLEKHG5O94827 1062 aa27.39■■□□□ 1.98
KDELR3-201ENST00000216014 ABTB2Q8N961 1025 aa27.39■■□□□ 1.98
KDELR3-201ENST00000216014 CGNL1Q0VF96 1302 aa27.39■■□□□ 1.98
KDELR3-201ENST00000216014 LMOD2Q6P5Q4 547 aa27.38■■□□□ 1.97
KDELR3-201ENST00000216014 ABCA3Q99758 1704 aa27.38■■□□□ 1.97
KDELR3-201ENST00000216014 FBLN1P23142 703 aa27.37■■□□□ 1.97
KDELR3-201ENST00000216014 USP31Q70CQ4 1352 aa27.36■■□□□ 1.97
KDELR3-201ENST00000216014 PHRF1Q9P1Y6 1649 aaKnown RBP27.36■■□□□ 1.97
KDELR3-201ENST00000216014 CABLES1Q8TDN4 633 aa27.35■■□□□ 1.97
KDELR3-201ENST00000216014 NPC1L1Q9UHC9 1359 aa27.35■■□□□ 1.97
KDELR3-201ENST00000216014 NLRP6P59044 892 aa27.34■■□□□ 1.97
KDELR3-201ENST00000216014 DIEXFQ68CQ4 756 aaKnown RBP27.33■■□□□ 1.97
KDELR3-201ENST00000216014 PNPLA6Q8IY17 1366 aa27.33■■□□□ 1.97
KDELR3-201ENST00000216014 COL22A1Q8NFW1 1626 aaPredicted RBP27.33■■□□□ 1.97
KDELR3-201ENST00000216014 SLIT3O75094 1523 aa27.31■■□□□ 1.96
KDELR3-201ENST00000216014 LRRC59Q96AG4 307 aaKnown RBP27.31■■□□□ 1.96
KDELR3-201ENST00000216014 SHPRHQ149N8 1683 aa27.31■■□□□ 1.96
KDELR3-201ENST00000216014 USP19O94966 1318 aa27.3■■□□□ 1.96
KDELR3-201ENST00000216014 FBXO41Q8TF61 875 aa27.3■■□□□ 1.96
KDELR3-201ENST00000216014 ARHGEF10O15013 1369 aa27.3■■□□□ 1.96
KDELR3-201ENST00000216014 NSD2O96028 1365 aa27.3■■□□□ 1.96
KDELR3-201ENST00000216014 TNNT2P45379 298 aaPredicted RBP27.3■■□□□ 1.96
KDELR3-201ENST00000216014 NFAT5O94916 1531 aa27.29■■□□□ 1.96
KDELR3-201ENST00000216014 SOX12O15370 315 aa27.29■■□□□ 1.96
KDELR3-201ENST00000216014 PARD3Q8TEW0 1356 aa27.28■■□□□ 1.96
KDELR3-201ENST00000216014 COG3Q96JB2 828 aa27.27■■□□□ 1.96
KDELR3-201ENST00000216014 MAP2P11137 1827 aaKnown RBP27.27■■□□□ 1.96
KDELR3-201ENST00000216014 MORC1Q86VD1 984 aa27.26■■□□□ 1.95
KDELR3-201ENST00000216014 PRKRIP1Q9H875 184 aaPredicted RBP27.26■■□□□ 1.95
KDELR3-201ENST00000216014 NLRP13Q86W25 1043 aa27.25■■□□□ 1.95
KDELR3-201ENST00000216014 LTN1O94822 1766 aa27.24■■□□□ 1.95
KDELR3-201ENST00000216014 PEAK1Q9H792 1746 aa27.23■■□□□ 1.95
KDELR3-201ENST00000216014 GCP02774 474 aa27.21■■□□□ 1.95
KDELR3-201ENST00000216014 JCADQ9P266 1359 aa27.2■■□□□ 1.95
KDELR3-201ENST00000216014 RRS1Q15050 365 aaKnown RBP27.2■■□□□ 1.94
KDELR3-201ENST00000216014 LRP6O75581 1613 aa27.18■■□□□ 1.94
KDELR3-201ENST00000216014 PPP2R1AP30153 589 aa27.18■■□□□ 1.94
KDELR3-201ENST00000216014 ZC3H6P61129 1189 aaKnown RBP27.17■■□□□ 1.94
KDELR3-201ENST00000216014 EMILIN1Q9Y6C2 1016 aa27.17■■□□□ 1.94
KDELR3-201ENST00000216014 RGPD5Q99666 1765 aa27.17■■□□□ 1.94
KDELR3-201ENST00000216014 COL18A1P39060 1754 aa27.16■■□□□ 1.94
KDELR3-201ENST00000216014 MIER1Q8N108 512 aa27.16■■□□□ 1.94
KDELR3-201ENST00000216014 POLKQ9UBT6 870 aa27.16■■□□□ 1.94
KDELR3-201ENST00000216014 ANP32CO43423 234 aa27.15■■□□□ 1.94
KDELR3-201ENST00000216014 MAP3K19Q56UN5 1328 aa27.15■■□□□ 1.94
KDELR3-201ENST00000216014 NUTM2BA6NNL0 878 aaPredicted RBP27.14■■□□□ 1.94
KDELR3-201ENST00000216014 NUTM2EB1AL46 878 aaPredicted RBP27.14■■□□□ 1.94
KDELR3-201ENST00000216014 RALBP1Q15311 655 aa27.14■■□□□ 1.94
KDELR3-201ENST00000216014 CCDC184Q52MB2 194 aa27.14■■□□□ 1.94
KDELR3-201ENST00000216014 AATKQ6ZMQ8 1374 aa27.14■■□□□ 1.94
KDELR3-201ENST00000216014 NUTM2AQ8IVF1 878 aaPredicted RBP27.14■■□□□ 1.94
KDELR3-201ENST00000216014 KIAA0232Q92628 1395 aa27.13■■□□□ 1.93
KDELR3-201ENST00000216014 ARHGEF25Q86VW2 580 aa27.12■■□□□ 1.93
KDELR3-201ENST00000216014 SMG6Q86US8 1419 aaKnown RBP27.11■■□□□ 1.93
KDELR3-201ENST00000216014 ZBTB7CA1YPR0 619 aa27.1■■□□□ 1.93
KDELR3-201ENST00000216014 CHRNA2Q15822 529 aa27.1■■□□□ 1.93
KDELR3-201ENST00000216014 KCNH5Q8NCM2 988 aa27.1■■□□□ 1.93
KDELR3-201ENST00000216014 MTHFSP49914 203 aa27.1■■□□□ 1.93
KDELR3-201ENST00000216014 MYBBP1AQ9BQG0 1328 aaKnown RBP27.09■■□□□ 1.93
KDELR3-201ENST00000216014 LMO7Q8WWI1 1683 aa27.09■■□□□ 1.93
KDELR3-201ENST00000216014 ADAMTS2O95450 1211 aa27.09■■□□□ 1.93
KDELR3-201ENST00000216014 CPDO75976 1380 aa27.08■■□□□ 1.93
KDELR3-201ENST00000216014 HAP1P54257 671 aaPredicted RBP27.07■■□□□ 1.92
KDELR3-201ENST00000216014 AXIN2Q9Y2T1 843 aa27.07■■□□□ 1.92
KDELR3-201ENST00000216014 FAM83GA6ND36 823 aa27.07■■□□□ 1.92
KDELR3-201ENST00000216014 PPM1GO15355 546 aaPredicted RBP27.07■■□□□ 1.92
KDELR3-201ENST00000216014 COL3A1P02461 1466 aaPredicted RBP27.06■■□□□ 1.92
KDELR3-201ENST00000216014 ILDR1Q86SU0 546 aaPredicted RBP27.05■■□□□ 1.92
KDELR3-201ENST00000216014 PLCH1Q4KWH8 1693 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms