RNA–Protein interactions for RNA: ENST00000215838.7

TCN2-201, Transcript of transcobalamin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCN2, Length 2,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-201ENST00000215838 PDLIM2Q96JY6 352 aa14.09□□□□□ -0.15
TCN2-201ENST00000215838 DEPDC5O75140 1603 aa14.09□□□□□ -0.15
TCN2-201ENST00000215838 RNF17Q9BXT8 1623 aaKnown RBP14.09□□□□□ -0.15
TCN2-201ENST00000215838 NCLP19338 710 aaKnown RBP14.09□□□□□ -0.15
TCN2-201ENST00000215838 E9PSI1 815 aa14.08□□□□□ -0.15
TCN2-201ENST00000215838 KLHL40Q2TBA0 621 aa14.08□□□□□ -0.15
TCN2-201ENST00000215838 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.15
TCN2-201ENST00000215838 BCL2L13Q9BXK5 485 aa14.08□□□□□ -0.15
TCN2-201ENST00000215838 CIZ1Q9ULV3 898 aaPredicted RBP14.08□□□□□ -0.15
TCN2-201ENST00000215838 ZMYM3Q14202 1370 aa14.08□□□□□ -0.16
TCN2-201ENST00000215838 KIF20AO95235 890 aa14.08□□□□□ -0.16
TCN2-201ENST00000215838 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.16
TCN2-201ENST00000215838 CAVIN1Q6NZI2 390 aaKnown RBP14.08□□□□□ -0.16
TCN2-201ENST00000215838 ZNF830Q96NB3 372 aaPredicted RBP14.08□□□□□ -0.16
TCN2-201ENST00000215838 TESK2Q96S53 571 aa14.08□□□□□ -0.16
TCN2-201ENST00000215838 GTPBP4Q9BZE4 634 aaKnown RBP14.08□□□□□ -0.16
TCN2-201ENST00000215838 YEATS2Q9ULM3 1422 aa14.08□□□□□ -0.16
TCN2-201ENST00000215838 FAM135AQ9P2D6 1515 aa14.07□□□□□ -0.16
TCN2-201ENST00000215838 IPO4Q8TEX9 1081 aaKnown RBP14.07□□□□□ -0.16
TCN2-201ENST00000215838 PRIM1P49642 420 aaKnown RBP14.06□□□□□ -0.16
TCN2-201ENST00000215838 ZSCAN23Q3MJ62 389 aa14.06□□□□□ -0.16
TCN2-201ENST00000215838 KDM5DQ9BY66 1539 aa14.06□□□□□ -0.16
TCN2-201ENST00000215838 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
TCN2-201ENST00000215838 SNX21Q969T3 373 aa14.06□□□□□ -0.16
TCN2-201ENST00000215838 IBTKQ9P2D0 1353 aaPredicted RBP14.06□□□□□ -0.16
TCN2-201ENST00000215838 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
TCN2-201ENST00000215838 ZNF445P59923 1031 aa14.05□□□□□ -0.16
TCN2-201ENST00000215838 RWDD1Q9H446 243 aaPredicted RBP14.05□□□□□ -0.16
TCN2-201ENST00000215838 LETM1O95202 739 aaPredicted RBP14.05□□□□□ -0.16
TCN2-201ENST00000215838 BAG4O95429 457 aaKnown RBP14.05□□□□□ -0.16
TCN2-201ENST00000215838 PTMSP20962 102 aa14.04□□□□□ -0.16
TCN2-201ENST00000215838 MYRIPQ8NFW9 859 aa14.04□□□□□ -0.16
TCN2-201ENST00000215838 PRDM15P57071 1507 aaPredicted RBP14.04□□□□□ -0.16
TCN2-201ENST00000215838 AK9Q5TCS8 1911 aa14.04□□□□□ -0.16
TCN2-201ENST00000215838 GOLGA6L22H0YM25 854 aa14.03□□□□□ -0.16
TCN2-201ENST00000215838 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
TCN2-201ENST00000215838 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
TCN2-201ENST00000215838 NINLQ9Y2I6 1382 aa14.03□□□□□ -0.16
TCN2-201ENST00000215838 RBM25P49756 843 aaKnown RBP14.03□□□□□ -0.16
TCN2-201ENST00000215838 MCTP1Q6DN14 999 aa14.03□□□□□ -0.16
TCN2-201ENST00000215838 GAS2L2Q8NHY3 880 aa14.03□□□□□ -0.16
TCN2-201ENST00000215838 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
TCN2-201ENST00000215838 KIF2CQ99661 725 aa14.02□□□□□ -0.16
TCN2-201ENST00000215838 CGNQ9P2M7 1197 aaKnown RBP14.02□□□□□ -0.16
TCN2-201ENST00000215838 ZC3H13Q5T200 1668 aaKnown RBP14.02□□□□□ -0.16
TCN2-201ENST00000215838 MROH1Q8NDA8 1641 aa14.02□□□□□ -0.16
TCN2-201ENST00000215838 RARSP54136 660 aaKnown RBP14.02□□□□□ -0.17
TCN2-201ENST00000215838 MPNDQ8N594 471 aa14.02□□□□□ -0.17
TCN2-201ENST00000215838 KNSTRNQ9Y448 316 aa14.02□□□□□ -0.17
TCN2-201ENST00000215838 IQGAP3Q86VI3 1631 aa14.02□□□□□ -0.17
TCN2-201ENST00000215838 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.17
TCN2-201ENST00000215838 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
TCN2-201ENST00000215838 DNTTIP2Q5QJE6 756 aaKnown RBP14.01□□□□□ -0.17
TCN2-201ENST00000215838 SIGLEC1Q9BZZ2 1709 aa14□□□□□ -0.17
TCN2-201ENST00000215838 MCM5P33992 734 aa14□□□□□ -0.17
TCN2-201ENST00000215838 PRAG1Q86YV5 1406 aa14□□□□□ -0.17
TCN2-201ENST00000215838 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
TCN2-201ENST00000215838 TAF7LQ5H9L4 462 aa14□□□□□ -0.17
TCN2-201ENST00000215838 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
TCN2-201ENST00000215838 CCDC39Q9UFE4 941 aa14□□□□□ -0.17
TCN2-201ENST00000215838 CCDC144AA2RUR9 1427 aa13.99□□□□□ -0.17
TCN2-201ENST00000215838 TMF1P82094 1093 aa13.99□□□□□ -0.17
TCN2-201ENST00000215838 NEUROD2Q15784 382 aa13.99□□□□□ -0.17
TCN2-201ENST00000215838 RNF214Q8ND24 703 aa13.99□□□□□ -0.17
TCN2-201ENST00000215838 LMTK2Q8IWU2 1503 aa13.98□□□□□ -0.17
TCN2-201ENST00000215838 K7ELQ4 463 aaPredicted RBP13.98□□□□□ -0.17
TCN2-201ENST00000215838 LMBRD1Q9NUN5 540 aa13.98□□□□□ -0.17
TCN2-201ENST00000215838 WWC1Q8IX03 1113 aa13.98□□□□□ -0.17
TCN2-201ENST00000215838 C17orf53Q8N3J3 647 aaPredicted RBP13.98□□□□□ -0.17
TCN2-201ENST00000215838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.17
TCN2-201ENST00000215838 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.98□□□□□ -0.17
TCN2-201ENST00000215838 KIAA2012Q0VF49 1180 aa13.97□□□□□ -0.17
TCN2-201ENST00000215838 PKP1Q13835 747 aa13.97□□□□□ -0.17
TCN2-201ENST00000215838 CLEC17AQ6ZS10 378 aa13.97□□□□□ -0.17
TCN2-201ENST00000215838 CHAMP1Q96JM3 812 aa13.97□□□□□ -0.17
TCN2-201ENST00000215838 RRP7AQ9Y3A4 280 aaKnown RBP13.97□□□□□ -0.17
TCN2-201ENST00000215838 SYCE3A1L190 88 aa13.96□□□□□ -0.17
TCN2-201ENST00000215838 GPT2Q8TD30 523 aa13.96□□□□□ -0.17
TCN2-201ENST00000215838 TET3O43151 1660 aa13.96□□□□□ -0.17
TCN2-201ENST00000215838 U2AF2P26368 475 aaKnown RBP eCLIP13.96□□□□□ -0.18
TCN2-201ENST00000215838 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.18
TCN2-201ENST00000215838 PTMAP06454 111 aaKnown RBP13.95□□□□□ -0.18
TCN2-201ENST00000215838 BCL2L12Q9HB09 334 aa13.95□□□□□ -0.18
TCN2-201ENST00000215838 PLA2R1Q13018 1463 aa13.95□□□□□ -0.18
TCN2-201ENST00000215838 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
TCN2-201ENST00000215838 KANK1Q14678 1352 aa13.94□□□□□ -0.18
TCN2-201ENST00000215838 MVPQ14764 893 aaKnown RBP13.94□□□□□ -0.18
TCN2-201ENST00000215838 NSFL1CQ9UNZ2 370 aaKnown RBP13.94□□□□□ -0.18
TCN2-201ENST00000215838 MROH2AA6NES4 1674 aa13.94□□□□□ -0.18
TCN2-201ENST00000215838 TMEM63CQ9P1W3 806 aa13.94□□□□□ -0.18
TCN2-201ENST00000215838 GTF2F1P35269 517 aaKnown RBP eCLIP13.93□□□□□ -0.18
TCN2-201ENST00000215838 ZNF771Q7L3S4 317 aaPredicted RBP13.93□□□□□ -0.18
TCN2-201ENST00000215838 ABCC3O15438 1527 aa13.93□□□□□ -0.18
TCN2-201ENST00000215838 PDCL2Q8N4E4 241 aa13.93□□□□□ -0.18
TCN2-201ENST00000215838 PRIMPOLQ96LW4 560 aa13.93□□□□□ -0.18
TCN2-201ENST00000215838 KIF3AQ9Y496 699 aa13.93□□□□□ -0.18
TCN2-201ENST00000215838 GPRASP1Q5JY77 1395 aa13.93□□□□□ -0.18
TCN2-201ENST00000215838 CEP152O94986 1710 aa13.93□□□□□ -0.18
TCN2-201ENST00000215838 PIK3C2GO75747 1445 aa13.92□□□□□ -0.18
TCN2-201ENST00000215838 CAMSAP1Q5T5Y3 1602 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms