RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 NEK4P51957 841 aa20.46■□□□□ 0.87
ITGB4-201ENST00000200181 DHX57Q6P158 1386 aaKnown RBP20.46■□□□□ 0.87
ITGB4-201ENST00000200181 ERLIN1O75477 346 aa20.46■□□□□ 0.87
ITGB4-201ENST00000200181 CCDC112Q8NEF3 446 aa20.46■□□□□ 0.87
ITGB4-201ENST00000200181 EIF3JO75822 258 aaKnown RBP20.45■□□□□ 0.86
ITGB4-201ENST00000200181 TBC1D2BQ9UPU7 963 aa20.45■□□□□ 0.86
ITGB4-201ENST00000200181 PPFIBP1Q86W92 1011 aa20.45■□□□□ 0.86
ITGB4-201ENST00000200181 RABEP1Q15276 862 aa20.44■□□□□ 0.86
ITGB4-201ENST00000200181 LUC7LQ9NQ29 371 aaKnown RBP20.44■□□□□ 0.86
ITGB4-201ENST00000200181 CEBPZQ03701 1054 aaKnown RBP20.44■□□□□ 0.86
ITGB4-201ENST00000200181 WWC2Q6AWC2 1192 aa20.44■□□□□ 0.86
ITGB4-201ENST00000200181 CCDC192P0DO97 292 aa20.43■□□□□ 0.86
ITGB4-201ENST00000200181 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
ITGB4-201ENST00000200181 HIP1O00291 1037 aa20.43■□□□□ 0.86
ITGB4-201ENST00000200181 DNAJC2Q99543 621 aaKnown RBP20.43■□□□□ 0.86
ITGB4-201ENST00000200181 DEF6Q9H4E7 631 aa20.43■□□□□ 0.86
ITGB4-201ENST00000200181 HMOX1P09601 288 aa20.43■□□□□ 0.86
ITGB4-201ENST00000200181 CLASRPQ8N2M8 674 aaKnown RBP20.43■□□□□ 0.86
ITGB4-201ENST00000200181 DACH1Q9UI36 760 aa20.43■□□□□ 0.86
ITGB4-201ENST00000200181 FHOD3Q2V2M9 1422 aa20.42■□□□□ 0.86
ITGB4-201ENST00000200181 TXLNBQ8N3L3 684 aa20.42■□□□□ 0.86
ITGB4-201ENST00000200181 UQCRHLA0A096LP55 91 aa20.42■□□□□ 0.86
ITGB4-201ENST00000200181 UQCRHP07919 91 aa20.42■□□□□ 0.86
ITGB4-201ENST00000200181 PSME1Q06323 249 aa20.42■□□□□ 0.86
ITGB4-201ENST00000200181 JMYQ8N9B5 988 aa20.41■□□□□ 0.86
ITGB4-201ENST00000200181 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
ITGB4-201ENST00000200181 TAX1BP1Q86VP1 789 aa20.41■□□□□ 0.86
ITGB4-201ENST00000200181 MPNDQ8N594 471 aa20.41■□□□□ 0.86
ITGB4-201ENST00000200181 USP8P40818 1118 aa20.4■□□□□ 0.86
ITGB4-201ENST00000200181 CENPHQ9H3R5 247 aa20.4■□□□□ 0.86
ITGB4-201ENST00000200181 SLC3A2P08195 630 aaKnown RBP20.4■□□□□ 0.86
ITGB4-201ENST00000200181 PDCL3Q9H2J4 239 aa20.4■□□□□ 0.86
ITGB4-201ENST00000200181 TNMDQ9H2S6 317 aa20.4■□□□□ 0.86
ITGB4-201ENST00000200181 INCENPQ9NQS7 918 aa20.4■□□□□ 0.86
ITGB4-201ENST00000200181 SURF6O75683 361 aaKnown RBP20.39■□□□□ 0.85
ITGB4-201ENST00000200181 RAPGEF4Q8WZA2 1011 aa20.39■□□□□ 0.85
ITGB4-201ENST00000200181 EZRP15311 586 aaKnown RBP20.39■□□□□ 0.85
ITGB4-201ENST00000200181 GNAI3P08754 354 aa20.39■□□□□ 0.85
ITGB4-201ENST00000200181 STIM1Q13586 685 aa20.38■□□□□ 0.85
ITGB4-201ENST00000200181 FAM193AP78312 1265 aa20.38■□□□□ 0.85
ITGB4-201ENST00000200181 ERICH4A6NGS2 130 aa20.38■□□□□ 0.85
ITGB4-201ENST00000200181 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
ITGB4-201ENST00000200181 CBFA2T2O43439 604 aa20.38■□□□□ 0.85
ITGB4-201ENST00000200181 NACADO15069 1562 aa20.37■□□□□ 0.85
ITGB4-201ENST00000200181 TANGO6Q9C0B7 1094 aa20.37■□□□□ 0.85
ITGB4-201ENST00000200181 FAM177A1Q8N128 213 aaPredicted RBP20.37■□□□□ 0.85
ITGB4-201ENST00000200181 IQCEQ6IPM2 695 aa20.37■□□□□ 0.85
ITGB4-201ENST00000200181 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
ITGB4-201ENST00000200181 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
ITGB4-201ENST00000200181 GRPEL1Q9HAV7 217 aa20.35■□□□□ 0.85
ITGB4-201ENST00000200181 ME1P48163 572 aa20.34■□□□□ 0.85
ITGB4-201ENST00000200181 CCDC30Q5VVM6 783 aa20.34■□□□□ 0.85
ITGB4-201ENST00000200181 CYP46A1Q9Y6A2 500 aa20.34■□□□□ 0.85
ITGB4-201ENST00000200181 ERC1Q8IUD2 1116 aa20.34■□□□□ 0.85
ITGB4-201ENST00000200181 LRRCC1Q9C099 1032 aa20.34■□□□□ 0.85
ITGB4-201ENST00000200181 WDR33Q9C0J8 1336 aaKnown RBP20.33■□□□□ 0.85
ITGB4-201ENST00000200181 STK3Q13188 491 aa20.32■□□□□ 0.84
ITGB4-201ENST00000200181 ANKRD1Q15327 319 aa20.32■□□□□ 0.84
ITGB4-201ENST00000200181 CCDC102AQ96A19 550 aa20.32■□□□□ 0.84
ITGB4-201ENST00000200181 TAF3Q5VWG9 929 aa20.32■□□□□ 0.84
ITGB4-201ENST00000200181 GCC1Q96CN9 775 aa20.32■□□□□ 0.84
ITGB4-201ENST00000200181 GBP2P32456 591 aaPredicted RBP20.32■□□□□ 0.84
ITGB4-201ENST00000200181 TTC39AQ5SRH9 613 aa20.32■□□□□ 0.84
ITGB4-201ENST00000200181 ZHX3Q9H4I2 956 aa20.32■□□□□ 0.84
ITGB4-201ENST00000200181 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
ITGB4-201ENST00000200181 KRT85P78386 507 aa20.31■□□□□ 0.84
ITGB4-201ENST00000200181 MEX3CQ5U5Q3 659 aaKnown RBP20.31■□□□□ 0.84
ITGB4-201ENST00000200181 TRIM22Q8IYM9 498 aa20.31■□□□□ 0.84
ITGB4-201ENST00000200181 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
ITGB4-201ENST00000200181 LRRFIP2Q9Y608 721 aaKnown RBP20.3■□□□□ 0.84
ITGB4-201ENST00000200181 MIA2Q96PC5 1412 aa20.3■□□□□ 0.84
ITGB4-201ENST00000200181 CCDC7Q96M83 1385 aa20.3■□□□□ 0.84
ITGB4-201ENST00000200181 DYDC1Q8WWB3 177 aa20.3■□□□□ 0.84
ITGB4-201ENST00000200181 K7ELQ4 463 aaPredicted RBP20.29■□□□□ 0.84
ITGB4-201ENST00000200181 RAPGEF2Q9Y4G8 1499 aa20.29■□□□□ 0.84
ITGB4-201ENST00000200181 CCDC158Q5M9N0 1113 aa20.29■□□□□ 0.84
ITGB4-201ENST00000200181 SEPT11Q9NVA2 429 aaKnown RBP20.29■□□□□ 0.84
ITGB4-201ENST00000200181 RRP9O43818 475 aaKnown RBP20.29■□□□□ 0.84
ITGB4-201ENST00000200181 GGNBP2Q9H3C7 697 aa20.29■□□□□ 0.84
ITGB4-201ENST00000200181 CNTLNQ9NXG0 1405 aa20.29■□□□□ 0.84
ITGB4-201ENST00000200181 C1orf115Q9H7X2 142 aa20.28■□□□□ 0.84
ITGB4-201ENST00000200181 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.28■□□□□ 0.84
ITGB4-201ENST00000200181 NLRP2Q9NX02 1062 aa20.28■□□□□ 0.84
ITGB4-201ENST00000200181 CCDC69A6NI79 296 aa20.28■□□□□ 0.84
ITGB4-201ENST00000200181 GNAI2P04899 355 aa20.28■□□□□ 0.84
ITGB4-201ENST00000200181 KIF6Q6ZMV9 814 aa20.27■□□□□ 0.84
ITGB4-201ENST00000200181 STK11IPQ8N1F8 1099 aa20.27■□□□□ 0.83
ITGB4-201ENST00000200181 NOL7Q9UMY1 257 aaKnown RBP20.26■□□□□ 0.83
ITGB4-201ENST00000200181 LARP1BQ659C4 914 aaKnown RBP20.26■□□□□ 0.83
ITGB4-201ENST00000200181 CEP57L1Q8IYX8 460 aa20.26■□□□□ 0.83
ITGB4-201ENST00000200181 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
ITGB4-201ENST00000200181 GIMAP7Q8NHV1 300 aa20.25■□□□□ 0.83
ITGB4-201ENST00000200181 TAF4BQ92750 862 aa20.25■□□□□ 0.83
ITGB4-201ENST00000200181 SPATA32Q96LK8 384 aa20.25■□□□□ 0.83
ITGB4-201ENST00000200181 ADAMTS8Q9UP79 889 aa20.25■□□□□ 0.83
ITGB4-201ENST00000200181 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
ITGB4-201ENST00000200181 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
ITGB4-201ENST00000200181 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
ITGB4-201ENST00000200181 JAKMIP3Q5VZ66 844 aa20.25■□□□□ 0.83
ITGB4-201ENST00000200181 ATP2B2Q01814 1243 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms