RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 GOLGA6L3A6NEY3 463 aa16.2■□□□□ 0.18
PCDHB4-201ENST00000194152 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
PCDHB4-201ENST00000194152 TAOK2Q9UL54 1235 aa16.19■□□□□ 0.18
PCDHB4-201ENST00000194152 A0A1W2PP64 1363 aa16.19■□□□□ 0.18
PCDHB4-201ENST00000194152 PRDM15P57071 1507 aaPredicted RBP16.18■□□□□ 0.18
PCDHB4-201ENST00000194152 TSPOAP1O95153 1857 aa16.18■□□□□ 0.18
PCDHB4-201ENST00000194152 NOL8Q76FK4 1167 aaKnown RBP16.18■□□□□ 0.18
PCDHB4-201ENST00000194152 TMEM57Q8N5G2 664 aa16.18■□□□□ 0.18
PCDHB4-201ENST00000194152 POGZQ7Z3K3 1410 aa16.17■□□□□ 0.18
PCDHB4-201ENST00000194152 CCDC9Q9Y3X0 531 aaKnown RBP16.17■□□□□ 0.18
PCDHB4-201ENST00000194152 ASXL1Q8IXJ9 1541 aa16.17■□□□□ 0.18
PCDHB4-201ENST00000194152 FOXO3O43524 673 aa16.16■□□□□ 0.18
PCDHB4-201ENST00000194152 PCDHB15Q9Y5E8 787 aa16.16■□□□□ 0.18
PCDHB4-201ENST00000194152 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
PCDHB4-201ENST00000194152 NCLP19338 710 aaKnown RBP16.15■□□□□ 0.18
PCDHB4-201ENST00000194152 TWISTNBQ3B726 338 aaPredicted RBP16.15■□□□□ 0.18
PCDHB4-201ENST00000194152 TSPYL6Q8N831 410 aa16.15■□□□□ 0.18
PCDHB4-201ENST00000194152 ADCY10Q96PN6 1610 aa16.15■□□□□ 0.18
PCDHB4-201ENST00000194152 TSPYL4Q9UJ04 414 aa16.15■□□□□ 0.18
PCDHB4-201ENST00000194152 ACEP12821 1306 aa16.14■□□□□ 0.17
PCDHB4-201ENST00000194152 RRP9O43818 475 aaKnown RBP16.14■□□□□ 0.17
PCDHB4-201ENST00000194152 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
PCDHB4-201ENST00000194152 ZFYVE16Q7Z3T8 1539 aa16.13■□□□□ 0.17
PCDHB4-201ENST00000194152 LTKP29376 864 aa16.13■□□□□ 0.17
PCDHB4-201ENST00000194152 ZC3H6P61129 1189 aaKnown RBP16.13■□□□□ 0.17
PCDHB4-201ENST00000194152 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
PCDHB4-201ENST00000194152 TRIM27P14373 513 aa16.12■□□□□ 0.17
PCDHB4-201ENST00000194152 HSP90AB1P08238 724 aaKnown RBP16.12■□□□□ 0.17
PCDHB4-201ENST00000194152 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
PCDHB4-201ENST00000194152 ZMYM3Q14202 1370 aa16.12■□□□□ 0.17
PCDHB4-201ENST00000194152 STK31Q9BXU1 1019 aa16.12■□□□□ 0.17
PCDHB4-201ENST00000194152 PANK2Q9BZ23 570 aa16.12■□□□□ 0.17
PCDHB4-201ENST00000194152 UHRF1BP1LA0JNW5 1464 aa16.12■□□□□ 0.17
PCDHB4-201ENST00000194152 F6X3S4 739 aa16.11■□□□□ 0.17
PCDHB4-201ENST00000194152 FKBP5Q13451 457 aaPredicted RBP16.11■□□□□ 0.17
PCDHB4-201ENST00000194152 RNF123Q5XPI4 1314 aa16.11■□□□□ 0.17
PCDHB4-201ENST00000194152 FOXD4L5Q5VV16 416 aaPredicted RBP16.11■□□□□ 0.17
PCDHB4-201ENST00000194152 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
PCDHB4-201ENST00000194152 FOXD4L4Q8WXT5 416 aaPredicted RBP16.11■□□□□ 0.17
PCDHB4-201ENST00000194152 PTPRTO14522 1441 aa16.1■□□□□ 0.17
PCDHB4-201ENST00000194152 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
PCDHB4-201ENST00000194152 ERVK-7P63135 1459 aa16.1■□□□□ 0.17
PCDHB4-201ENST00000194152 WDR63Q8IWG1 891 aa16.1■□□□□ 0.17
PCDHB4-201ENST00000194152 DDX19BQ9UMR2 479 aa16.1■□□□□ 0.17
PCDHB4-201ENST00000194152 CROCC2H7BZ55 1655 aa16.09■□□□□ 0.17
PCDHB4-201ENST00000194152 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
PCDHB4-201ENST00000194152 RIMS2Q9UQ26 1411 aa16.09■□□□□ 0.17
PCDHB4-201ENST00000194152 GNAI1P63096 354 aa16.09■□□□□ 0.17
PCDHB4-201ENST00000194152 AIMP1Q12904 312 aaKnown RBP16.08■□□□□ 0.17
PCDHB4-201ENST00000194152 MVPQ14764 893 aaKnown RBP16.08■□□□□ 0.17
PCDHB4-201ENST00000194152 FAM13BQ9NYF5 915 aa16.08■□□□□ 0.17
PCDHB4-201ENST00000194152 ANKRD36BQ8N2N9 1353 aa16.08■□□□□ 0.17
PCDHB4-201ENST00000194152 NKTRP30414 1462 aaKnown RBP16.08■□□□□ 0.16
PCDHB4-201ENST00000194152 CALD1Q05682 793 aaKnown RBP16.08■□□□□ 0.16
PCDHB4-201ENST00000194152 CLTCL1P53675 1640 aa16.08■□□□□ 0.16
PCDHB4-201ENST00000194152 ANXA1P04083 346 aa16.08■□□□□ 0.16
PCDHB4-201ENST00000194152 PDE3AQ14432 1141 aa16.08■□□□□ 0.16
PCDHB4-201ENST00000194152 HSCBQ8IWL3 235 aa16.08■□□□□ 0.16
PCDHB4-201ENST00000194152 YTHDC2Q9H6S0 1430 aaKnown RBP16.08■□□□□ 0.16
PCDHB4-201ENST00000194152 NFE2L2Q16236 605 aa16.07■□□□□ 0.16
PCDHB4-201ENST00000194152 PROSER2Q86WR7 435 aaPredicted RBP16.07■□□□□ 0.16
PCDHB4-201ENST00000194152 SEC24BO95487 1268 aa16.07■□□□□ 0.16
PCDHB4-201ENST00000194152 KCNA6P17658 529 aa16.07■□□□□ 0.16
PCDHB4-201ENST00000194152 FOXD4L6Q3SYB3 417 aaPredicted RBP16.07■□□□□ 0.16
PCDHB4-201ENST00000194152 FOXD4L3Q6VB84 417 aaPredicted RBP16.07■□□□□ 0.16
PCDHB4-201ENST00000194152 FCHSD2O94868 740 aa16.07■□□□□ 0.16
PCDHB4-201ENST00000194152 ANP32BQ92688 251 aaKnown RBP16.07■□□□□ 0.16
PCDHB4-201ENST00000194152 TRIM6-TRIM34B2RNG4 842 aa16.06■□□□□ 0.16
PCDHB4-201ENST00000194152 C8orf58Q8NAV2 365 aa16.06■□□□□ 0.16
PCDHB4-201ENST00000194152 NLRP2Q9NX02 1062 aa16.06■□□□□ 0.16
PCDHB4-201ENST00000194152 MBIPQ9NS73 344 aa16.05■□□□□ 0.16
PCDHB4-201ENST00000194152 METP08581 1390 aa16.05■□□□□ 0.16
PCDHB4-201ENST00000194152 TNRQ92752 1358 aa16.05■□□□□ 0.16
PCDHB4-201ENST00000194152 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
PCDHB4-201ENST00000194152 TEFQ10587 303 aa16.05■□□□□ 0.16
PCDHB4-201ENST00000194152 CLASP1Q7Z460 1538 aa16.05■□□□□ 0.16
PCDHB4-201ENST00000194152 SMARCA5O60264 1052 aaPredicted RBP16.04■□□□□ 0.16
PCDHB4-201ENST00000194152 PPIP5K1Q6PFW1 1433 aa16.04■□□□□ 0.16
PCDHB4-201ENST00000194152 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
PCDHB4-201ENST00000194152 RILPL2Q969X0 211 aa16.03■□□□□ 0.16
PCDHB4-201ENST00000194152 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
PCDHB4-201ENST00000194152 HSPA2P54652 639 aa16.02■□□□□ 0.16
PCDHB4-201ENST00000194152 TSHZ3Q63HK5 1081 aa16.02■□□□□ 0.16
PCDHB4-201ENST00000194152 EIF2AK4Q9P2K8 1649 aaKnown RBP16.02■□□□□ 0.15
PCDHB4-201ENST00000194152 EIF4A2Q14240 407 aaKnown RBP16.02■□□□□ 0.15
PCDHB4-201ENST00000194152 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDHB4-201ENST00000194152 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
PCDHB4-201ENST00000194152 E9PCH4 1651 aa16.01■□□□□ 0.15
PCDHB4-201ENST00000194152 KIF16BQ96L93 1317 aa16.01■□□□□ 0.15
PCDHB4-201ENST00000194152 TRPM2O94759 1503 aa16.01■□□□□ 0.15
PCDHB4-201ENST00000194152 CHMP3Q9Y3E7 222 aa16.01■□□□□ 0.15
PCDHB4-201ENST00000194152 ANKLE2Q86XL3 938 aa16■□□□□ 0.15
PCDHB4-201ENST00000194152 CABLES1Q8TDN4 633 aa16■□□□□ 0.15
PCDHB4-201ENST00000194152 TTC21BQ7Z4L5 1316 aa16■□□□□ 0.15
PCDHB4-201ENST00000194152 TRPM1Q7Z4N2 1603 aa16■□□□□ 0.15
PCDHB4-201ENST00000194152 LRRC59Q96AG4 307 aaKnown RBP16■□□□□ 0.15
PCDHB4-201ENST00000194152 POLR3AO14802 1390 aaPredicted RBP16■□□□□ 0.15
PCDHB4-201ENST00000194152 IQGAP3Q86VI3 1631 aa15.99■□□□□ 0.15
PCDHB4-201ENST00000194152 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
PCDHB4-201ENST00000194152 ESPNB1AK53 854 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms