RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 BRD4O60885 1362 aaPredicted RBP29.69■■■□□ 2.34
HOXC8-201ENST00000040584 USP6P35125 1406 aa29.68■■■□□ 2.34
HOXC8-201ENST00000040584 DCCP43146 1447 aa29.68■■■□□ 2.34
HOXC8-201ENST00000040584 ORAI2Q96SN7 254 aa29.68■■■□□ 2.34
HOXC8-201ENST00000040584 TNNT2P45379 298 aaPredicted RBP29.66■■■□□ 2.34
HOXC8-201ENST00000040584 CADPS2Q86UW7 1296 aa29.66■■■□□ 2.34
HOXC8-201ENST00000040584 NME9Q86XW9 330 aa29.65■■■□□ 2.34
HOXC8-201ENST00000040584 C1orf167Q5SNV9 1468 aa29.65■■■□□ 2.34
HOXC8-201ENST00000040584 TTC21BQ7Z4L5 1316 aa29.65■■■□□ 2.34
HOXC8-201ENST00000040584 KIF20BQ96Q89 1820 aa29.64■■■□□ 2.34
HOXC8-201ENST00000040584 MST1RQ04912 1400 aa29.64■■■□□ 2.34
HOXC8-201ENST00000040584 NRKQ7Z2Y5 1582 aa29.63■■■□□ 2.33
HOXC8-201ENST00000040584 SSH2Q76I76 1423 aa29.62■■■□□ 2.33
HOXC8-201ENST00000040584 ZRANB1Q9UGI0 708 aa29.61■■■□□ 2.33
HOXC8-201ENST00000040584 ANKRD26Q9UPS8 1709 aa29.59■■■□□ 2.33
HOXC8-201ENST00000040584 FAM9BQ8IZU0 186 aa29.57■■■□□ 2.32
HOXC8-201ENST00000040584 FOXO3O43524 673 aa29.57■■■□□ 2.32
HOXC8-201ENST00000040584 PSME1Q06323 249 aa29.56■■■□□ 2.32
HOXC8-201ENST00000040584 PNISRQ8TF01 805 aaKnown RBP29.55■■■□□ 2.32
HOXC8-201ENST00000040584 TTC21AQ8NDW8 1320 aa29.55■■■□□ 2.32
HOXC8-201ENST00000040584 LTBP4Q8N2S1 1624 aa29.54■■■□□ 2.32
HOXC8-201ENST00000040584 COG3Q96JB2 828 aa29.54■■■□□ 2.32
HOXC8-201ENST00000040584 PAK3O75914 559 aaPredicted RBP29.53■■■□□ 2.32
HOXC8-201ENST00000040584 NEFLP07196 543 aa29.51■■■□□ 2.31
HOXC8-201ENST00000040584 XPCQ01831 940 aaPredicted RBP29.51■■■□□ 2.31
HOXC8-201ENST00000040584 KIF1AQ12756 1690 aa29.51■■■□□ 2.31
HOXC8-201ENST00000040584 FBLN1P23142 703 aa29.5■■■□□ 2.31
HOXC8-201ENST00000040584 MTHFSP49914 203 aa29.5■■■□□ 2.31
HOXC8-201ENST00000040584 SLAIN2Q9P270 581 aa29.5■■■□□ 2.31
HOXC8-201ENST00000040584 OVOS2A0A0J9YW53 1432 aa29.47■■■□□ 2.31
HOXC8-201ENST00000040584 OVOS2Q6IE36 1432 aa29.47■■■□□ 2.31
HOXC8-201ENST00000040584 PIK3C2AO00443 1686 aa29.46■■■□□ 2.31
HOXC8-201ENST00000040584 KRT28Q7Z3Y7 464 aa29.46■■■□□ 2.31
HOXC8-201ENST00000040584 ABTB2Q8N961 1025 aa29.46■■■□□ 2.31
HOXC8-201ENST00000040584 DDX17Q92841 729 aaKnown RBP29.46■■■□□ 2.31
HOXC8-201ENST00000040584 NUTM2GQ5VZR2 741 aa29.45■■■□□ 2.31
HOXC8-201ENST00000040584 BRINP3Q76B58 766 aa29.45■■■□□ 2.31
HOXC8-201ENST00000040584 NLRP6P59044 892 aa29.44■■■□□ 2.3
HOXC8-201ENST00000040584 USP31Q70CQ4 1352 aa29.43■■■□□ 2.3
HOXC8-201ENST00000040584 POLKQ9UBT6 870 aa29.41■■■□□ 2.3
HOXC8-201ENST00000040584 FKBP8Q14318 412 aa29.4■■■□□ 2.3
HOXC8-201ENST00000040584 MYT1Q01538 1121 aa29.4■■■□□ 2.3
HOXC8-201ENST00000040584 NPHP3Q7Z494 1330 aa29.39■■■□□ 2.3
HOXC8-201ENST00000040584 AATKQ6ZMQ8 1374 aa29.39■■■□□ 2.3
HOXC8-201ENST00000040584 SOX12O15370 315 aa29.38■■■□□ 2.29
HOXC8-201ENST00000040584 CFAP53Q96M91 514 aa29.38■■■□□ 2.29
HOXC8-201ENST00000040584 MAP2P11137 1827 aaKnown RBP29.38■■■□□ 2.29
HOXC8-201ENST00000040584 RRS1Q15050 365 aaKnown RBP29.38■■■□□ 2.29
HOXC8-201ENST00000040584 TRPM3Q9HCF6 1732 aaPredicted RBP29.37■■■□□ 2.29
HOXC8-201ENST00000040584 PPM1GO15355 546 aaPredicted RBP29.37■■■□□ 2.29
HOXC8-201ENST00000040584 EMILIN1Q9Y6C2 1016 aa29.37■■■□□ 2.29
HOXC8-201ENST00000040584 WDR43Q15061 677 aaKnown RBP eCLIP29.36■■■□□ 2.29
HOXC8-201ENST00000040584 LMOD2Q6P5Q4 547 aa29.36■■■□□ 2.29
HOXC8-201ENST00000040584 HNRNPUQ00839 825 aaKnown RBP eCLIP29.35■■■□□ 2.29
HOXC8-201ENST00000040584 MARF1Q9Y4F3 1742 aaKnown RBP29.35■■■□□ 2.29
HOXC8-201ENST00000040584 ADAMTS8Q9UP79 889 aa29.34■■■□□ 2.29
HOXC8-201ENST00000040584 INSRP06213 1382 aa29.33■■■□□ 2.29
HOXC8-201ENST00000040584 USP54Q70EL1 1684 aa29.32■■■□□ 2.28
HOXC8-201ENST00000040584 PXDNQ92626 1479 aa29.32■■■□□ 2.28
HOXC8-201ENST00000040584 SMG6Q86US8 1419 aaKnown RBP29.3■■■□□ 2.28
HOXC8-201ENST00000040584 SBNO1A3KN83 1393 aa29.3■■■□□ 2.28
HOXC8-201ENST00000040584 PNPLA6Q8IY17 1366 aa29.3■■■□□ 2.28
HOXC8-201ENST00000040584 COL3A1P02461 1466 aaPredicted RBP29.29■■■□□ 2.28
HOXC8-201ENST00000040584 PLEKHG5O94827 1062 aa29.29■■■□□ 2.28
HOXC8-201ENST00000040584 SHPRHQ149N8 1683 aa29.28■■■□□ 2.28
HOXC8-201ENST00000040584 ALS2Q96Q42 1657 aa29.27■■■□□ 2.28
HOXC8-201ENST00000040584 BLMP54132 1417 aaPredicted RBP29.27■■■□□ 2.28
HOXC8-201ENST00000040584 MAP3K19Q56UN5 1328 aa29.26■■■□□ 2.27
HOXC8-201ENST00000040584 SENP3-EIF4A1A0A087X0R7 540 aa29.25■■■□□ 2.27
HOXC8-201ENST00000040584 SOS2Q07890 1332 aaPredicted RBP29.25■■■□□ 2.27
HOXC8-201ENST00000040584 CDK12Q9NYV4 1490 aaPredicted RBP29.25■■■□□ 2.27
HOXC8-201ENST00000040584 TNS3Q68CZ2 1445 aa29.25■■■□□ 2.27
HOXC8-201ENST00000040584 SPATA31A3Q5VYP0 1347 aa29.24■■■□□ 2.27
HOXC8-201ENST00000040584 DIAPH1O60610 1272 aaKnown RBP29.24■■■□□ 2.27
HOXC8-201ENST00000040584 KCNH5Q8NCM2 988 aa29.21■■■□□ 2.27
HOXC8-201ENST00000040584 NUDCQ9Y266 331 aa29.21■■■□□ 2.27
HOXC8-201ENST00000040584 PEAK1Q9H792 1746 aa29.21■■■□□ 2.27
HOXC8-201ENST00000040584 USP19O94966 1318 aa29.21■■■□□ 2.27
HOXC8-201ENST00000040584 ROBO1Q9Y6N7 1651 aa29.21■■■□□ 2.27
HOXC8-201ENST00000040584 ERICH6BQ5W0A0 696 aa29.21■■■□□ 2.27
HOXC8-201ENST00000040584 TSHZ2Q9NRE2 1034 aa29.21■■■□□ 2.27
HOXC8-201ENST00000040584 ZBED9Q6R2W3 1325 aa29.2■■■□□ 2.27
HOXC8-201ENST00000040584 NHSL1Q5SYE7 1610 aa29.2■■■□□ 2.27
HOXC8-201ENST00000040584 U2SURPO15042 1029 aaKnown RBP29.2■■■□□ 2.26
HOXC8-201ENST00000040584 GCP02774 474 aa29.2■■■□□ 2.26
HOXC8-201ENST00000040584 NFAT5O94916 1531 aa29.19■■■□□ 2.26
HOXC8-201ENST00000040584 U2AF1L5P0DN76 240 aaPredicted RBP29.19■■■□□ 2.26
HOXC8-201ENST00000040584 U2AF1Q01081 240 aaKnown RBP eCLIP29.19■■■□□ 2.26
HOXC8-201ENST00000040584 SLIT3O75094 1523 aa29.19■■■□□ 2.26
HOXC8-201ENST00000040584 AMPHP49418 695 aa29.19■■■□□ 2.26
HOXC8-201ENST00000040584 HSP90AB2PQ58FF8 381 aa29.19■■■□□ 2.26
HOXC8-201ENST00000040584 TOM1O60784 492 aa29.18■■■□□ 2.26
HOXC8-201ENST00000040584 CCDC146Q8IYE0 955 aa29.18■■■□□ 2.26
HOXC8-201ENST00000040584 ARHGEF10O15013 1369 aa29.17■■■□□ 2.26
HOXC8-201ENST00000040584 IL13P35225 146 aa29.17■■■□□ 2.26
HOXC8-201ENST00000040584 MED1Q15648 1581 aaPredicted RBP29.16■■■□□ 2.26
HOXC8-201ENST00000040584 FLT4P35916 1363 aa29.16■■■□□ 2.26
HOXC8-201ENST00000040584 CABLES1Q8TDN4 633 aa29.15■■■□□ 2.26
HOXC8-201ENST00000040584 PIP4K2BP78356 416 aa29.14■■■□□ 2.26
HOXC8-201ENST00000040584 ZBTB7CA1YPR0 619 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms