RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 PLCD4Q9BRC7 762 aa6.32□□□□□ -1.4
CDH17-201ENST00000027335 RGS17Q9UGC6 210 aaPredicted RBP6.32□□□□□ -1.4
CDH17-201ENST00000027335 CENPJQ9HC77 1338 aaPredicted RBP6.32□□□□□ -1.4
CDH17-201ENST00000027335 NKTRP30414 1462 aaKnown RBP6.32□□□□□ -1.4
CDH17-201ENST00000027335 ZMYM3Q14202 1370 aa6.32□□□□□ -1.4
CDH17-201ENST00000027335 APAF1O14727 1248 aa6.31□□□□□ -1.4
CDH17-201ENST00000027335 HDGFP51858 240 aaKnown RBP6.31□□□□□ -1.4
CDH17-201ENST00000027335 TXNDC2Q86VQ3 553 aa6.31□□□□□ -1.4
CDH17-201ENST00000027335 BCL2L13Q9BXK5 485 aa6.31□□□□□ -1.4
CDH17-201ENST00000027335 GOLGA2Q08379 1002 aa6.31□□□□□ -1.4
CDH17-201ENST00000027335 PRAM1Q96QH2 718 aa6.31□□□□□ -1.4
CDH17-201ENST00000027335 EID1Q9Y6B2 187 aa6.31□□□□□ -1.4
CDH17-201ENST00000027335 WAPLQ7Z5K2 1190 aa6.31□□□□□ -1.4
CDH17-201ENST00000027335 NOP58Q9Y2X3 529 aaKnown RBP6.31□□□□□ -1.4
CDH17-201ENST00000027335 SPHKAPQ2M3C7 1700 aa6.31□□□□□ -1.4
CDH17-201ENST00000027335 NPHP4O75161 1426 aaPredicted RBP6.3□□□□□ -1.4
CDH17-201ENST00000027335 COL16A1Q07092 1604 aaPredicted RBP6.3□□□□□ -1.4
CDH17-201ENST00000027335 TEX2Q8IWB9 1127 aa6.3□□□□□ -1.4
CDH17-201ENST00000027335 CWC22Q9HCG8 908 aaKnown RBP6.3□□□□□ -1.4
CDH17-201ENST00000027335 SLC52A1Q9NWF4 448 aa6.3□□□□□ -1.4
CDH17-201ENST00000027335 ZNF335Q9H4Z2 1342 aaPredicted RBP6.3□□□□□ -1.4
CDH17-201ENST00000027335 EIF3AQ14152 1382 aaKnown RBP6.3□□□□□ -1.4
CDH17-201ENST00000027335 NOS1P29475 1434 aa6.3□□□□□ -1.4
CDH17-201ENST00000027335 CERS3Q8IU89 383 aa6.29□□□□□ -1.4
CDH17-201ENST00000027335 UBR1Q8IWV7 1749 aa6.29□□□□□ -1.4
CDH17-201ENST00000027335 GCC2Q8IWJ2 1684 aa6.29□□□□□ -1.4
CDH17-201ENST00000027335 ADAMTS8Q9UP79 889 aa6.29□□□□□ -1.4
CDH17-201ENST00000027335 PAK3O75914 559 aaPredicted RBP6.29□□□□□ -1.4
CDH17-201ENST00000027335 TMED8Q6PL24 325 aaPredicted RBP6.29□□□□□ -1.4
CDH17-201ENST00000027335 RRP1P56182 461 aaKnown RBP6.28□□□□□ -1.4
CDH17-201ENST00000027335 NECTIN2Q92692 538 aa6.28□□□□□ -1.4
CDH17-201ENST00000027335 GGNBP2Q9H3C7 697 aa6.28□□□□□ -1.4
CDH17-201ENST00000027335 UGGT1Q9NYU2 1555 aa6.28□□□□□ -1.4
CDH17-201ENST00000027335 ROBO1Q9Y6N7 1651 aa6.28□□□□□ -1.4
CDH17-201ENST00000027335 HDGFL2Q7Z4V5 671 aaPredicted RBP6.28□□□□□ -1.4
CDH17-201ENST00000027335 PNISRQ8TF01 805 aaKnown RBP6.28□□□□□ -1.4
CDH17-201ENST00000027335 CRBNQ96SW2 442 aa6.28□□□□□ -1.4
CDH17-201ENST00000027335 RNF216Q9NWF9 866 aaPredicted RBP6.28□□□□□ -1.4
CDH17-201ENST00000027335 MROH1Q8NDA8 1641 aa6.28□□□□□ -1.4
CDH17-201ENST00000027335 EVC2Q86UK5 1308 aa6.28□□□□□ -1.4
CDH17-201ENST00000027335 IPO4Q8TEX9 1081 aaKnown RBP6.28□□□□□ -1.4
CDH17-201ENST00000027335 USP35Q9P2H5 1018 aa6.28□□□□□ -1.4
CDH17-201ENST00000027335 PHLPP1O60346 1717 aa6.27□□□□□ -1.4
CDH17-201ENST00000027335 ARHGEF5Q12774 1597 aa6.27□□□□□ -1.41
CDH17-201ENST00000027335 DIP2AQ14689 1571 aa6.27□□□□□ -1.41
CDH17-201ENST00000027335 ABCB7O75027 752 aa6.27□□□□□ -1.41
CDH17-201ENST00000027335 MYH16Q9H6N6 1097 aa6.27□□□□□ -1.41
CDH17-201ENST00000027335 ELL2O00472 640 aaPredicted RBP6.27□□□□□ -1.41
CDH17-201ENST00000027335 RAD21O60216 631 aa6.27□□□□□ -1.41
CDH17-201ENST00000027335 PDE3BQ13370 1112 aa6.27□□□□□ -1.41
CDH17-201ENST00000027335 WWC1Q8IX03 1113 aa6.27□□□□□ -1.41
CDH17-201ENST00000027335 MAST1Q9Y2H9 1570 aa6.27□□□□□ -1.41
CDH17-201ENST00000027335 SPRYD3Q8NCJ5 442 aa6.26□□□□□ -1.41
CDH17-201ENST00000027335 PRAG1Q86YV5 1406 aa6.26□□□□□ -1.41
CDH17-201ENST00000027335 UNC13BO14795 1591 aa6.26□□□□□ -1.41
CDH17-201ENST00000027335 SPATA31A6Q5VVP1 1343 aa6.26□□□□□ -1.41
CDH17-201ENST00000027335 APBB1O00213 710 aa6.26□□□□□ -1.41
CDH17-201ENST00000027335 NUTM2GQ5VZR2 741 aa6.26□□□□□ -1.41
CDH17-201ENST00000027335 NGDNQ8NEJ9 315 aaKnown RBP6.26□□□□□ -1.41
CDH17-201ENST00000027335 PMFBP1Q8TBY8 1022 aa6.26□□□□□ -1.41
CDH17-201ENST00000027335 CABP1Q9NZU7 370 aa6.26□□□□□ -1.41
CDH17-201ENST00000027335 RBM25P49756 843 aaKnown RBP6.25□□□□□ -1.41
CDH17-201ENST00000027335 TESK2Q96S53 571 aa6.25□□□□□ -1.41
CDH17-201ENST00000027335 TERF2IPQ9NYB0 399 aa6.25□□□□□ -1.41
CDH17-201ENST00000027335 COG6Q9Y2V7 657 aa6.25□□□□□ -1.41
CDH17-201ENST00000027335 A0A0G2JS52 829 aa6.25□□□□□ -1.41
CDH17-201ENST00000027335 TCERG1O14776 1098 aaKnown RBP6.25□□□□□ -1.41
CDH17-201ENST00000027335 NPM3O75607 178 aaKnown RBP6.25□□□□□ -1.41
CDH17-201ENST00000027335 PTMAP06454 111 aaKnown RBP6.25□□□□□ -1.41
CDH17-201ENST00000027335 SLC4A3P48751 1232 aa6.25□□□□□ -1.41
CDH17-201ENST00000027335 DDRGK1Q96HY6 314 aa6.25□□□□□ -1.41
CDH17-201ENST00000027335 STAC3Q96MF2 364 aa6.25□□□□□ -1.41
CDH17-201ENST00000027335 CDK19Q9BWU1 502 aa6.25□□□□□ -1.41
CDH17-201ENST00000027335 FBLN1P23142 703 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 ITPRIPQ8IWB1 547 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 KCTD17Q8N5Z5 321 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 C14orf93Q9H972 538 aaKnown RBP6.24□□□□□ -1.41
CDH17-201ENST00000027335 SMC4Q9NTJ3 1288 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.24□□□□□ -1.41
CDH17-201ENST00000027335 PPP2R1AP30153 589 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 UPF1Q92900 1129 aaKnown RBP eCLIP6.24□□□□□ -1.41
CDH17-201ENST00000027335 SECISBP2LQ93073 1101 aaKnown RBP6.24□□□□□ -1.41
CDH17-201ENST00000027335 TNRQ92752 1358 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 JCADQ9P266 1359 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 NCKAP5LQ9HCH0 1330 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 SETQ01105 290 aaPredicted RBP6.24□□□□□ -1.41
CDH17-201ENST00000027335 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.24□□□□□ -1.41
CDH17-201ENST00000027335 CHMP4BQ9H444 224 aaKnown RBP6.24□□□□□ -1.41
CDH17-201ENST00000027335 ARHGAP31Q2M1Z3 1444 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 TET3O43151 1660 aa6.24□□□□□ -1.41
CDH17-201ENST00000027335 LTV1Q96GA3 475 aaPredicted RBP6.23□□□□□ -1.41
CDH17-201ENST00000027335 CGNL1Q0VF96 1302 aa6.23□□□□□ -1.41
CDH17-201ENST00000027335 MTHFSP49914 203 aa6.23□□□□□ -1.41
CDH17-201ENST00000027335 BECN1Q14457 450 aa6.23□□□□□ -1.41
CDH17-201ENST00000027335 CC2D2BQ6DHV5 1058 aa6.23□□□□□ -1.41
CDH17-201ENST00000027335 PRDM15P57071 1507 aaPredicted RBP6.23□□□□□ -1.41
CDH17-201ENST00000027335 RPGRIP1LQ68CZ1 1315 aa6.23□□□□□ -1.41
CDH17-201ENST00000027335 BRD4O60885 1362 aaPredicted RBP6.23□□□□□ -1.41
CDH17-201ENST00000027335 PDE4AP27815 886 aa6.23□□□□□ -1.41
CDH17-201ENST00000027335 THEMISQ8N1K5 641 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms