RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 MCTP1Q6DN14 999 aa13.51□□□□□ -0.25
RGPD5-201ENST00000016946 NFXL1Q6ZNB6 911 aa13.51□□□□□ -0.25
RGPD5-201ENST00000016946 CREBRFQ8IUR6 639 aa13.51□□□□□ -0.25
RGPD5-201ENST00000016946 CAMSAP2Q08AD1 1489 aa13.51□□□□□ -0.25
RGPD5-201ENST00000016946 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
RGPD5-201ENST00000016946 RALYLQ86SE5 291 aaKnown RBP13.51□□□□□ -0.25
RGPD5-201ENST00000016946 FANCAO15360 1455 aa13.5□□□□□ -0.25
RGPD5-201ENST00000016946 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
RGPD5-201ENST00000016946 CWC22Q9HCG8 908 aaKnown RBP13.5□□□□□ -0.25
RGPD5-201ENST00000016946 FOXO3O43524 673 aa13.5□□□□□ -0.25
RGPD5-201ENST00000016946 NAP1L5Q96NT1 182 aaPredicted RBP13.5□□□□□ -0.25
RGPD5-201ENST00000016946 ABCC5O15440 1437 aa13.5□□□□□ -0.25
RGPD5-201ENST00000016946 FCHSD2O94868 740 aa13.49□□□□□ -0.25
RGPD5-201ENST00000016946 SRCIN1Q9C0H9 1055 aa13.49□□□□□ -0.25
RGPD5-201ENST00000016946 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
RGPD5-201ENST00000016946 TSR2Q969E8 191 aaKnown RBP13.49□□□□□ -0.25
RGPD5-201ENST00000016946 FSD1Q9BTV5 496 aa13.48□□□□□ -0.25
RGPD5-201ENST00000016946 DHX29Q7Z478 1369 aaKnown RBP13.48□□□□□ -0.25
RGPD5-201ENST00000016946 FYB1O15117 783 aa13.48□□□□□ -0.25
RGPD5-201ENST00000016946 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
RGPD5-201ENST00000016946 CUL7Q14999 1698 aa13.48□□□□□ -0.25
RGPD5-201ENST00000016946 CNNM1Q9NRU3 951 aa13.48□□□□□ -0.25
RGPD5-201ENST00000016946 CDCA7LQ96GN5 454 aa13.47□□□□□ -0.25
RGPD5-201ENST00000016946 PHF14O94880 888 aa13.47□□□□□ -0.25
RGPD5-201ENST00000016946 GNL3LQ9NVN8 582 aaKnown RBP13.47□□□□□ -0.25
RGPD5-201ENST00000016946 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
RGPD5-201ENST00000016946 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
RGPD5-201ENST00000016946 GNAI2P04899 355 aa13.46□□□□□ -0.25
RGPD5-201ENST00000016946 WASLO00401 505 aaPredicted RBP13.46□□□□□ -0.26
RGPD5-201ENST00000016946 ADAMTS2O95450 1211 aa13.46□□□□□ -0.26
RGPD5-201ENST00000016946 ADGRF5Q8IZF2 1346 aa13.46□□□□□ -0.26
RGPD5-201ENST00000016946 KIF14Q15058 1648 aa13.45□□□□□ -0.26
RGPD5-201ENST00000016946 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
RGPD5-201ENST00000016946 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
RGPD5-201ENST00000016946 WDR63Q8IWG1 891 aa13.45□□□□□ -0.26
RGPD5-201ENST00000016946 NSD3Q9BZ95 1437 aa13.45□□□□□ -0.26
RGPD5-201ENST00000016946 MYL6BP14649 208 aa13.45□□□□□ -0.26
RGPD5-201ENST00000016946 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
RGPD5-201ENST00000016946 CT47B1P0C2W7 299 aaPredicted RBP13.44□□□□□ -0.26
RGPD5-201ENST00000016946 CNTROBQ8N137 903 aa13.44□□□□□ -0.26
RGPD5-201ENST00000016946 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
RGPD5-201ENST00000016946 CDC45O75419 566 aa13.44□□□□□ -0.26
RGPD5-201ENST00000016946 TPD52L1Q16890 204 aaPredicted RBP13.44□□□□□ -0.26
RGPD5-201ENST00000016946 CADPS2Q86UW7 1296 aa13.44□□□□□ -0.26
RGPD5-201ENST00000016946 NCOA1Q15788 1441 aa13.44□□□□□ -0.26
RGPD5-201ENST00000016946 PEG3Q9GZU2 1588 aa13.44□□□□□ -0.26
RGPD5-201ENST00000016946 CCDC158Q5M9N0 1113 aa13.44□□□□□ -0.26
RGPD5-201ENST00000016946 NINLQ9Y2I6 1382 aa13.44□□□□□ -0.26
RGPD5-201ENST00000016946 PES1O00541 588 aaKnown RBP13.44□□□□□ -0.26
RGPD5-201ENST00000016946 FOXD4L6Q3SYB3 417 aaPredicted RBP13.44□□□□□ -0.26
RGPD5-201ENST00000016946 FOXD4L3Q6VB84 417 aaPredicted RBP13.44□□□□□ -0.26
RGPD5-201ENST00000016946 GOLGA6L3A6NEY3 463 aa13.43□□□□□ -0.26
RGPD5-201ENST00000016946 DDX11L8A8MPP1 907 aa13.43□□□□□ -0.26
RGPD5-201ENST00000016946 TNRQ92752 1358 aa13.43□□□□□ -0.26
RGPD5-201ENST00000016946 SAFBQ15424 915 aaKnown RBP eCLIP13.43□□□□□ -0.26
RGPD5-201ENST00000016946 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
RGPD5-201ENST00000016946 STARD3NLO95772 234 aa13.43□□□□□ -0.26
RGPD5-201ENST00000016946 NME9Q86XW9 330 aa13.43□□□□□ -0.26
RGPD5-201ENST00000016946 CCDC47Q96A33 483 aaKnown RBP13.43□□□□□ -0.26
RGPD5-201ENST00000016946 LRPPRCP42704 1394 aaKnown RBP13.43□□□□□ -0.26
RGPD5-201ENST00000016946 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
RGPD5-201ENST00000016946 NFE2L2Q16236 605 aa13.42□□□□□ -0.26
RGPD5-201ENST00000016946 CEP89Q96ST8 783 aa13.42□□□□□ -0.26
RGPD5-201ENST00000016946 PCF11O94913 1555 aaKnown RBP13.42□□□□□ -0.26
RGPD5-201ENST00000016946 TEX14Q8IWB6 1497 aa13.42□□□□□ -0.26
RGPD5-201ENST00000016946 PDE3AQ14432 1141 aa13.42□□□□□ -0.26
RGPD5-201ENST00000016946 CCDC43Q96MW1 224 aaKnown RBP13.42□□□□□ -0.26
RGPD5-201ENST00000016946 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
RGPD5-201ENST00000016946 NOB1Q9ULX3 412 aaKnown RBP13.42□□□□□ -0.26
RGPD5-201ENST00000016946 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
RGPD5-201ENST00000016946 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
RGPD5-201ENST00000016946 DDX49Q9Y6V7 483 aaKnown RBP13.41□□□□□ -0.26
RGPD5-201ENST00000016946 AMOTQ4VCS5 1084 aa13.41□□□□□ -0.26
RGPD5-201ENST00000016946 SMC3Q9UQE7 1217 aa13.41□□□□□ -0.26
RGPD5-201ENST00000016946 ASXL2Q76L83 1435 aa13.41□□□□□ -0.26
RGPD5-201ENST00000016946 BECN2A8MW95 431 aa13.4□□□□□ -0.26
RGPD5-201ENST00000016946 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
RGPD5-201ENST00000016946 VPS37CA5D8V6 355 aaPredicted RBP13.4□□□□□ -0.26
RGPD5-201ENST00000016946 IKQ13123 557 aaPredicted RBP13.4□□□□□ -0.26
RGPD5-201ENST00000016946 KRT28Q7Z3Y7 464 aa13.4□□□□□ -0.26
RGPD5-201ENST00000016946 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
RGPD5-201ENST00000016946 HIP1O00291 1037 aa13.4□□□□□ -0.26
RGPD5-201ENST00000016946 SLC3A2P08195 630 aaKnown RBP13.4□□□□□ -0.26
RGPD5-201ENST00000016946 BICDL1Q6ZP65 573 aa13.4□□□□□ -0.26
RGPD5-201ENST00000016946 C14orf93Q9H972 538 aaKnown RBP13.4□□□□□ -0.26
RGPD5-201ENST00000016946 PTCD1O75127 700 aaKnown RBP13.4□□□□□ -0.26
RGPD5-201ENST00000016946 TPM3P06753 285 aa13.4□□□□□ -0.26
RGPD5-201ENST00000016946 PSMA5P28066 241 aa13.4□□□□□ -0.26
RGPD5-201ENST00000016946 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
RGPD5-201ENST00000016946 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
RGPD5-201ENST00000016946 C1orf115Q9H7X2 142 aa13.39□□□□□ -0.27
RGPD5-201ENST00000016946 TPM2P07951 284 aa13.39□□□□□ -0.27
RGPD5-201ENST00000016946 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.39□□□□□ -0.27
RGPD5-201ENST00000016946 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
RGPD5-201ENST00000016946 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
RGPD5-201ENST00000016946 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
RGPD5-201ENST00000016946 NOS1P29475 1434 aa13.38□□□□□ -0.27
RGPD5-201ENST00000016946 NOC3LQ8WTT2 800 aaKnown RBP13.38□□□□□ -0.27
RGPD5-201ENST00000016946 SIL1Q9H173 461 aa13.38□□□□□ -0.27
RGPD5-201ENST00000016946 PLCH2O75038 1416 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms