RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Gm1043A0A140LJC2 1431 aa12.45□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Jakmip2D3YXK0 820 aa12.45□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Fam135aQ6NS59 1506 aa12.45□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Triml2E9PW10 424 aa12.45□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Me1P06801 572 aa12.44□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Wdr62Q3U3T8 1523 aa12.44□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Pabpn1Q8CCS6 302 aaKnown RBP12.44□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Stim1P70302 685 aa12.44□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Ccp110Q7TSH4 1004 aa12.44□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Gcc2Q8CHG3 1679 aa12.44□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Urb2E9Q7L1 1524 aaKnown RBP12.44□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Mink1Q9JM52 1308 aa12.43□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Pbrm1Q8BSQ9 1634 aaKnown RBP12.43□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Q8BT18 775 aa12.43□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Gps2Q921N8 327 aa12.43□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Dhx16G3X8X0 1044 aaKnown RBP12.42□□□□□ -0.42
Scn8a-201ENSMUST00000082209 BccipQ9CWI3 316 aa12.42□□□□□ -0.42
Scn8a-201ENSMUST00000082209 TefQ9JLC6 301 aa12.42□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Lrrfip1Q3UZ39 729 aaKnown RBP12.42□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Wwc1Q5SXA9 1104 aa12.42□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Peg3Q3URU2 1571 aa12.42□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Drc7Q6V3W6 876 aa12.42□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Pdcl2Q78Y63 240 aa12.41□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Gtf2a1Q99PM3 378 aa12.41□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Ppp2r1aQ76MZ3 589 aa12.41□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Slc52a2Q9D8F3 450 aa12.41□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Puf60Q3UEB3 564 aaKnown RBP12.41□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Lrrc45Q8CIM1 670 aa12.41□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Plekhd1B2RPU2 505 aa12.41□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Q9D9S1 216 aa12.41□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Hmox1P14901 289 aa12.4□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Tmco3Q8BH01 678 aa12.4□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Nek4Q9Z1J2 792 aa12.4□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Riok1Q922Q2 567 aa12.4□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Kif1bQ60575 1816 aaKnown RBP12.4□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Nap1l2P51860 460 aa12.4□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Neurod6P48986 337 aa12.4□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Cfdp1O88271 295 aaKnown RBP12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Mad1l1Q9WTX8 717 aaKnown RBP12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Cep57l1Q8VDS7 400 aa12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Map4k4P97820 1233 aaKnown RBP12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Cep131Q62036 1060 aa12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Ccdc96Q9CR92 584 aa12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Ncbp1Q3UYV9 790 aaKnown RBP12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Bag1Q60739 355 aa12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Wasf1Q8R5H6 559 aa12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Lmbr1Q9JIT0 490 aa12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Rad54l2Q99NG0 1466 aa12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Map9Q3TRR0 646 aa12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Krt85Q9Z2T6 507 aa12.39□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Pde4cQ3UEI1 686 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Usp48Q3V0C5 1052 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 CadpsQ80TJ1 1355 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Cfap58B2RW38 873 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Magi1Q6RHR9 1471 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Cyp26c1B2RXA7 518 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Zpr1Q62384 459 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Stard3nlQ9DCI3 235 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Def6Q8C2K1 630 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Hnrnpul1Q8VDM6 859 aaKnown RBP12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Erc1Q99MI1 1120 aa12.38□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Frmpd1A2AKB4 1549 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Ehmt1Q5DW34 1296 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Tnpo1Q8BFY9 898 aaKnown RBP12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Pknox2Q8BG99 474 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Fgd6Q69ZL1 1399 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 PogkQ80TC5 607 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Fmnl2A2APV2 1086 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Zmym4A2A791 1549 aaKnown RBP12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Sptbn5F6UCX4 1208 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Ankrd26Q811D2 1581 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Gm14025A2AP89 1413 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Pank1Q8K4K6 548 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Nphp1Q9QY53 687 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Atf3Q60765 181 aa12.37□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Naip2Q9QUK4 1447 aa12.36□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Atp2b2Q9R0K7 1198 aa12.36□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Kdm2bQ6P1G2 1309 aa12.36□□□□□ -0.43
Scn8a-201ENSMUST00000082209 ZgpatQ8VDM1 511 aa12.36□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Rprd2Q6NXI6 1469 aaKnown RBP12.36□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Spag5Q7TME2 1165 aa12.36□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Ppp6r1Q7TSI3 856 aa12.36□□□□□ -0.43
Scn8a-201ENSMUST00000082209 TatQ8QZR1 454 aa12.36□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Sirt1Q923E4 737 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 SelenooQ9DBC0 667 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Mlh3A0A1Y7VMP7 1443 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 TnmdQ9EP64 317 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Gsdma2Q32M21 443 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Cfap45Q9D9U9 551 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Zfp444Q3TDV8 331 aaKnown RBP12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 LarsQ8BMJ2 1178 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 NcapgE9PWG6 1004 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Cct4P80315 539 aaKnown RBP12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Mical1Q8VDP3 1048 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Otud6bQ8K2H2 294 aa12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Ddx19aQ61655 478 aaKnown RBP12.35□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Igf1rQ60751 1373 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Krt84Q99M73 603 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 PaskQ8CEE6 1383 aa12.34□□□□□ -0.43
Scn8a-201ENSMUST00000082209 Kif21bQ9QXL1 1668 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms